@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0192: (2016-03-13 )
MIELKNVYRTFKNGDKNIRVLKDINIHINAGEFIAIMGPSGSGKSTLINILGFIDREYHGEYLFEGSNYQTQSDNQLANIRNKTVGFVFQNFKLIHNNTILENISMPLVYTNMNTIERKNKVMTVLSAVGLDGKGDFTPSKLSGGQQQRVAIARAIINNPKFIIADEPTGALDSDTSKIIMDIFTSLNRDNHTTIILVTHDRKVAEKADRIIHILDGRIQHEEVIK

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




21 PsiBlast_CBE 99.3545%-115 - C1 -1L2T - Y796_METJA -
1 PsiBlast_PDB 97.3845%-111 - C1 -1L2T - Y796_METJA -
117 HHSearch 94.8645%-108 - C1 -3TIF 6.3 Y796_METJA
22 PsiBlast_CBE 94.3344%-114 - C1 -3TIF - Y796_METJA -
2 PsiBlast_PDB 94.2544%-108 - C1 -3TIF - Y796_METJA -
3 PsiBlast_PDB 93.6044%-106 - C1 -1F3O - Y796_METJA -
8 PsiBlast_PDB 87.7337%-113 - C1 -3TUZ - METN_ECOLI -
27 PsiBlast_CBE 87.3337%-104 - C1 -3TUI - METN_ECOLI -
115 HHSearch 85.6741%-110 - C1 -2PCJ - LOLD_AQUAE -
122 Fugue 84.7937%-110 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 84.4837%-111 - C1 -3TUZ - METN_ECOLI -
25 PsiBlast_CBE 84.0437%-104 - C1 -3TUZ - METN_ECOLI -
7 PsiBlast_PDB 83.9037%-107 - C1 -3TUI - METN_ECOLI -
28 PsiBlast_CBE 82.6337%-105 - C1 -3TUI - METN_ECOLI -
29 PsiBlast_CBE 82.3837%-106 - C1 -3TUI - METN_ECOLI -
101 HHSearch 81.9938%-104 - C1 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 81.5237%-105 - C1 -3TUZ - METN_ECOLI -
4 PsiBlast_PDB 79.6742%-107 - C1 -2PCJ - LOLD_AQUAE -
23 PsiBlast_CBE 79.6342%-108 - C1 -2PCJ - LOLD_AQUAE -
5 PsiBlast_PDB 79.1642%-106 - C1 -2PCL - LOLD_AQUAE -
57 PsiBlast_CBE 78.1035%-116 - C1 -4HLU 5.1 ECFA1_THEMA
119 HHSearch 73.1438%-115 * C1 *2OLJ 5.8 ?
77 PsiBlast_CBE 69.3634%-102 - C1 -2FGK 5.3 HLYBP_ECOLX
97 PsiBlast_CBE 69.0934%-103 - C1 -1XEF 5.2
100 PsiBlast_CBE 68.7334%-106 - C1 -1XEF 5.0 HLYBP_ECOLX
92 PsiBlast_CBE 68.4534%-107 - C1 -2FGJ 5.2
99 PsiBlast_CBE 68.3534%-105 - C1 -1XEF 5.3 HLYBP_ECOLX
95 PsiBlast_CBE 68.3434%-104 - C1 -2FGJ 5.1 HLYBP_ECOLX
98 PsiBlast_CBE 68.0534%-113 - C1 -1XEF 5.1 HLYBP_ECOLX
79 PsiBlast_CBE 66.8834%-100 - C1 -2FGK 5.9 HLYBP_ECOLX
78 PsiBlast_CBE 66.4434%-102 - C1 -2FGK 5.4 HLYBP_ECOLX
60 PsiBlast_CBE 66.4434% -99 - C1 -2PMK 4.7
80 PsiBlast_CBE 66.3434% -97 - C1 -2FFB 4.7
58 PsiBlast_CBE 66.2834% -99 - C1 -2FF7 4.7
109 HHSearch 65.8631% -94 - C1 -3FVQ 7.0 FBPC_NEIG1
76 PsiBlast_CBE 65.6534%-103 - C1 -2FGK 5.4
93 PsiBlast_CBE 64.7634%-102 - C1 -2FGJ 5.2 HLYBP_ECOLX
96 PsiBlast_CBE 63.1334% -97 - C1 -2FFA 4.8
61 PsiBlast_CBE 62.5734% -98 - C1 -3B5J 4.8
94 PsiBlast_CBE 62.4434%-101 - C1 -2FGJ 5.3 HLYBP_ECOLX