@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0231: (2016-03-13 )
MLTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFNQTNQKRGMQSSALAQAVMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGENLLKAIQDVTGLEEHDPVIQAWAKAYGVIADVFIQIEKEIYDQMMWIGFKPFKITNIKQESEDIKSFTVETEEYDFSEFTPGQYITVDVSSDKLPYRAKRHYSIVSGEKNHLTFGVKRDVTTEHEGEVSTILHDEIKEGDMINLAAPVGGFVLENTTEPQLFLGSGIGVTPLVAMYEAASAKGLDTQMVQVAENEQHLPFKDNFNSIASHYDNAKLYTHLKDKQGYIGTEELQAFLANKPEIYICGGTKFLQSMIEALKSLNYDMDRVHYETFIPRLSVAV

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_2(4G1V)
?
[Raw transfer]




HEM_A_2(3OZU)
HMP_CUPNH
[Raw transfer]




HEM_B_6(2VHB)
BAHG_VITST
[Raw transfer]




HEM_A_3(3VHB)
BAHG_VITST
[Raw transfer]




HEM_B_6(4VHB)
BAHG_VITST
[Raw transfer]




HEM_B_5(3TLD)
BAHG_VITST
[Raw transfer]




HEM_A_3(1GVH)
HMP_ECOLI
[Raw transfer]




HEM_A_3(1VHB)
BAHG_VITST
[Raw transfer]




HEM_A_3(1GVH)
HMP_ECOLI
[Raw transfer]




HEM_A_5(2VHB)
BAHG_VITST
[Raw transfer]




HEM_B_9(3OZW)
HMP_CUPNH
[Raw transfer]




HEM_A_5(4VHB)
BAHG_VITST
[Raw transfer]




HEM_B_4(1VHB)
BAHG_VITST
[Raw transfer]




HEM_B_5(3VHB)
BAHG_VITST
[Raw transfer]




HEM_A_3(1GVH)
HMP_ECOLI
[Raw transfer]




HEM_A_2(2WY4)
?
[Raw transfer]




GOL_B_11(2EIX)
?
[Raw transfer]




DGG_A_9(3OZV)
HMP_CUPNH
[Raw transfer]




DGG_B_5(3OZV)
HMP_CUPNH
[Raw transfer]




GOL_B_6(3TLD)
BAHG_VITST
[Raw transfer]




DGG_A_6(3OZW)
HMP_CUPNH
[Raw transfer]




FMN_A_2(2PIA)
?
[Raw transfer]




DGG_A_6(1CQX)
HMP_CUPNH
[Raw transfer]




DGG_B_9(1CQX)
HMP_CUPNH
[Raw transfer]




DGG_A_6(1CQX)
HMP_CUPNH
[Raw transfer]




OXY_A_5(3UBC)
?
[Raw transfer]




OXY_A_5(3UBV)
?
[Raw transfer]




OXY_D_7(3UBV)
?
[Raw transfer]




OXY_D_7(3UBC)
?
[Raw transfer]




OXY_A_5(3S1I)
?
[Raw transfer]




OXY_G_9(3UBC)
?
[Raw transfer]




OXY_B_7(3S1I)
?
[Raw transfer]




OXY_C_11(3S1I)
?
[Raw transfer]




OXY_G_9(3UBV)
?
[Raw transfer]




2 PsiBlast_PDB 92.2041% -94 - C1 -4G1V 12.3 ?
1 PsiBlast_PDB 91.4441% -98 - C1 -4G1B - ? -
23 PsiBlast_CBE 90.8141% -98 - C1 -4G1B - ? -
22 PsiBlast_CBE 90.4641% -98 - C1 -4G1B - ? -
21 PsiBlast_CBE 90.1541% -95 - C1 -4G1B - ? -
64 Fugue 86.9533% -95 - C1 -1GVH 12.2 HMP_ECOLI
42 HHSearch 84.1733% -92 * C1 *1GVH 12.2 HMP_ECOLI
4 PsiBlast_PDB 83.6436% -95 - C1 -3OZU 10.8 HMP_CUPNH
7 PsiBlast_PDB 82.3732% -90 - C1 -1GVH 12.1 HMP_ECOLI
24 PsiBlast_CBE 81.7537% -97 - C1 -1CQX 7.7 HMP_CUPNH
25 PsiBlast_CBE 81.6936% -95 - C1 -3OZW 11.0 HMP_CUPNH
41 HHSearch 81.6037% -92 - C1 -1CQX 7.6 HMP_CUPNH
6 PsiBlast_PDB 81.4236% -92 - C1 -3OZW 4.5 HMP_CUPNH
3 PsiBlast_PDB 81.0637% -94 - C1 -1CQX 7.6 HMP_CUPNH
26 PsiBlast_CBE 80.5036% -91 - C1 -3OZV 4.9 HMP_CUPNH
5 PsiBlast_PDB 79.7136% -95 - C1 -3OZV 3.8 HMP_CUPNH
27 PsiBlast_CBE 55.6551%-112 - C1 -4VHB 9.9 BAHG_VITST
29 PsiBlast_CBE 54.6551%-116 - C1 -2VHB 9.8 BAHG_VITST
11 PsiBlast_PDB 54.3651%-111 - C1 -4VHB 10.0 BAHG_VITST
28 PsiBlast_CBE 54.1451%-110 - C1 -3VHB 10.3 BAHG_VITST
31 PsiBlast_CBE 54.1250%-111 - C1 -3TLD 11.6 BAHG_VITST
30 PsiBlast_CBE 54.0751%-111 - C1 -1VHB 11.8 BAHG_VITST
10 PsiBlast_PDB 53.7251%-114 - C1 -3VHB 10.5 BAHG_VITST
9 PsiBlast_PDB 53.6451%-112 - C1 -2VHB 9.2 BAHG_VITST
8 PsiBlast_PDB 51.9051%-103 - C1 -1VHB 11.7 BAHG_VITST
12 PsiBlast_PDB 50.2743%-101 - C1 -2WY4 12.1 ?
39 PsiBlast_CBE 42.5031% -84 - C1 -3UBC 2.9 ?
16 PsiBlast_PDB 41.5531% -86 - C1 -3UBC 2.9 ?
38 PsiBlast_CBE 41.2131% -84 - C1 -3UBC 3.1 ?
17 PsiBlast_PDB 40.8231% -84 - C1 -3UBV 3.0 ?
36 PsiBlast_CBE 39.8831% -89 - C1 -3UBV 3.0 ?
34 PsiBlast_CBE 39.3131% -82 - C1 -3S1I 3.1 ?
14 PsiBlast_PDB 39.0231% -82 - C1 -3S1I 3.0 ?
35 PsiBlast_CBE 38.6531% -85 - C1 -3S1I 3.0 ?
37 PsiBlast_CBE 38.6231% -89 - C1 -3UBV 2.9 ?