@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0256: (2016-03-13 )
MTKLPQNFMWGGALAANQFEGGYEKGGKGLSVIDVMTSGAHGKARQITESIDLNHYYPNHEGIDFYHRYKEDIALFKEMGLKCLRTSIAWTRIFPNGDEDVPNEEGLAFYDRIFDELIAQGIEPVVTLSHFEMPLHLAKHYGGFRNREVVDYFVHFARVVFERYKDKVTYWMTFNEINNQMDTSNPIFLWTNSGVALTENDNPEEVLYQVAHHELLASALAVRLGKEINPKFKIGTMISHVPIYPYSCHPKDMMEAQIANRLRFFFPDVQVRGYYPSYAKKMLARKGYDVGWQEGDDSILQQGTVDYIGFSYYMSTAVKHDVDTTVENNIVNGGLNHSVENPHIATSDWGWAIDPDGLRYTLNVLYDRYQLPLFIVENGFGAVDEVVDGHIHDDYRIEYLKAHITAAIEAVDQDGVDLIGYTPWGIIDIVSFTTGEMKKRYGLIYVDRDNDGHGTMERLKKDSFYWYQQVIASNGDKL

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6GB_B_5(4GPN)
?
[Raw transfer]



BG6_A_3(4F66)
?
[Raw transfer]



P53_A_2(4F79)
?
[Raw transfer]



6GB_A_3(4GPN)
?
[Raw transfer]



BG6_B_7(4F66)
?
[Raw transfer]



1FT_B_3(4IPN)
?
[Raw transfer]



1FT_E_4(4IPN)
?
[Raw transfer]



BGP_B_4(4PBG)
LACG_LACLL
[Raw transfer]



BGP_A_3(4PBG)
LACG_LACLL
[Raw transfer]



GOL_A_3(4IPL)
?
[Raw transfer]



YLL_B_6(2JAL)
BGLA_THEMA
[Raw transfer]



BGC_A_2(3QOM)
?
[Raw transfer]
22 PsiBlast_CBE 97.9060% -95 - C3 -2XHY - BGLA_ECOLI -
101 HHSearch 97.7261% -92 - C3 -2XHY - BGLA_ECOLI -
2 PsiBlast_PDB 97.5559% -92 - C3 -4F66 6.0 ?
25 PsiBlast_CBE 97.5159% -94 - C3 -4GPN 6.5 ?
24 PsiBlast_CBE 97.3859% -92 - C3 -4F66 5.4 ?
5 PsiBlast_PDB 97.2958% -91 - C3 -3PN8 - ? -
1 PsiBlast_PDB 97.2460% -95 - C3 -2XHY - BGLA_ECOLI -
23 PsiBlast_CBE 97.1260% -93 - C3 -2XHY - BGLA_ECOLI -
4 PsiBlast_PDB 96.7759% -91 - C3 -4GPN 5.2 ?
3 PsiBlast_PDB 96.7359% -92 - C3 -4F79 5.9 ?
21 PsiBlast_CBE 96.6260% -97 - C3 -2XHY - BGLA_ECOLI -
6 PsiBlast_PDB 94.0954% -89 - C3 -3QOM 3.2 ?
7 PsiBlast_PDB 93.6254% -88 - C3 -4GZE - ? -
9 PsiBlast_PDB 90.7748% -97 - C3 -4IPN 4.0 ?
26 PsiBlast_CBE 89.7248% -93 - C3 -4IPN 2.5 ?
8 PsiBlast_PDB 89.4048% -94 - C3 -4IPL 2.9 ?
100 PsiBlast_CBE 80.9131% -89 - C3 -3AIQ - HGL1B_WHEAT -
99 PsiBlast_CBE 80.7231% -88 - C3 -3AIR - HGL1B_WHEAT -
78 PsiBlast_CBE 80.5332% -88 - C3 -4PTW - ? -
77 PsiBlast_CBE 80.3732% -87 - C3 -4PTX - ? -
86 PsiBlast_CBE 79.0033% -90 - C3 -4PBG 4.8 LACG_LACLL
87 PsiBlast_CBE 78.5533% -89 - C3 -4PBG 5.0 LACG_LACLL
47 PsiBlast_CBE 76.8333% -87 - C3 -2JAL 3.4 BGLA_THEMA