@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0727: (2016-03-18 )
MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESFGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_Q_15(1HDG)
G3P_THEMA
[Raw transfer]



NAD_O_13(1HDG)
G3P_THEMA
[Raw transfer]



NAD_B_4(2EP7)
G3P_AQUAE
[Raw transfer]



NAD_O_13(1HDG)
G3P_THEMA
[Raw transfer]



NAD_C_9(4P8R)
?
[Raw transfer]



NAD_A_3(2EP7)
G3P_AQUAE
[Raw transfer]



NAD_B_7(4P8R)
?
[Raw transfer]



NAD_A_5(4P8R)
?
[Raw transfer]
7 PsiBlast_PDB 98.7899% -89 - C4 -3LC1 - G3P1_STAAR -
21 PsiBlast_CBE 98.49100% -90 - C4 -3LVF - G3P1_STAAR -
1 PsiBlast_PDB 98.27100% -88 - C4 -3LVF - G3P1_STAAR -
23 PsiBlast_CBE 97.89100% -89 - C4 -3LVF - G3P1_STAAR -
44 PsiBlast_CBE 97.8799% -92 - C4 -3KV3 - G3P1_STAAR -
24 PsiBlast_CBE 97.86100% -90 - C4 -3LC2 - G3P1_STAAR -
40 PsiBlast_CBE 97.4799% -92 - C4 -3LC1 - G3P1_STAAR -
120 HHSearch 97.3199% -88 - C4 -3LVF - G3P1_STAAR -
22 PsiBlast_CBE 97.25100% -89 - C4 -3LVF - G3P1_STAAR -
39 PsiBlast_CBE 97.2399% -89 - C4 -3LC1 - G3P1_STAAR -
41 PsiBlast_CBE 97.1999% -91 - C4 -3LC1 - G3P1_STAAR -
36 PsiBlast_CBE 97.08100% -88 - C4 -3VAZ - G3P1_STAAR -
42 PsiBlast_CBE 97.0499% -91 - C4 -3KV3 - G3P1_STAAR -
38 PsiBlast_CBE 97.01100% -89 - C4 -3VAZ - G3P1_STAAR -
46 PsiBlast_CBE 96.9999% -90 - C4 -3HQ4 - G3P1_STAAR -
43 PsiBlast_CBE 96.9399% -90 - C4 -3KV3 - G3P1_STAAR -
31 PsiBlast_CBE 96.89100% -87 - C4 -3K73 - G3P1_STAAR -
49 PsiBlast_CBE 96.6899% -86 - C4 -3L4S - G3P1_STAAR -
8 PsiBlast_PDB 96.6699% -90 - C4 -3HQ4 - G3P1_STAAR -
30 PsiBlast_CBE 96.57100% -86 - C4 -3K73 - G3P1_STAAR -
101 Fugue 79.7454% -84 - C4 -1HDG 8.6 G3P_THEMA
69 PsiBlast_CBE 79.2349% -81 - C4 -4P8R 8.7 ?
17 PsiBlast_PDB 79.0349% -82 - C4 -4P8R 9.1 ?
70 PsiBlast_CBE 77.6849% -82 - C4 -4P8R 8.7 ?
14 PsiBlast_PDB 77.3553% -81 - C4 -1HDG 9.4 G3P_THEMA
15 PsiBlast_PDB 77.0651% -77 - C4 -2EP7 9.5 G3P_AQUAE
64 PsiBlast_CBE 76.6951% -79 - C4 -2EP7 9.3 G3P_AQUAE
63 PsiBlast_CBE 76.5253% -80 - C4 -1HDG 9.6 G3P_THEMA