@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0817: (2016-03-19 )
MKSKYEPLFDKVELPNGVELRNRFVLAPLTHISSNDDGTISDVELPYIEKRSQDVGITINAASNVSDVGKAFPGQPSIAHDSDIEGLKRLATAMKKNGAKALVQIHHGGAQALPELIPDGDVVAPSPISLKSFGQKQEHSAREMTNEEIEQAIKDFGEATRRAIEAGFDGVEIHGANHYLIHQFVSPYYNRRNDVWANQYKFPVAVIEEVLKAKEAYGNKDFIVGYRLSPEEAESPGITMEITEELVNKISHMPIDYIHVSMMDTHATTREGKYAGQERLPLIHKWINGRMPLIGIGSIFTADEALDAVENVGVDLVAIGRELLLDYQFVEKIKDGREDEIINYFDPEREDNHHLTPNLWHQFNEGFYPLPRKDK

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_2(2Q3R)
OPR1_ARATH
[Raw transfer]




FMN_A_2(1VJI)
OPR1_ARATH
[Raw transfer]




FMN_C_3(1ICQ)
OPR1_SOLLC
[Raw transfer]




FMN_B_7(1ICP)
OPR1_SOLLC
[Raw transfer]




FMN_D_4(1ICQ)
OPR1_SOLLC
[Raw transfer]




FMN_C_3(1ICS)
OPR1_SOLLC
[Raw transfer]




FMN_A_6(1ICP)
OPR1_SOLLC
[Raw transfer]




FMN_A_3(3HGR)
OPR1_SOLLC
[Raw transfer]




FMN_D_4(1ICS)
OPR1_SOLLC
[Raw transfer]




FMN_B_5(3HGR)
OPR1_SOLLC
[Raw transfer]




1 PsiBlast_PDB 94.8332% -79 - C3 -3L5A - ? -
46 HHSearch 94.7629% -76 - C3 -3L5A - ? -
2 PsiBlast_PDB 91.0628% -82 - C3 -4B5N - ? -
26 PsiBlast_CBE 88.5532% -76 - C3 -3KRU - ? -
22 PsiBlast_CBE 88.3532% -78 - C3 -3KRZ - ? -
61 Fugue 88.2224% -67 - C3 -1PS9 - FADH_ECOLI -
48 HHSearch 88.0825% -70 - C3 -2R14 - ? -
24 PsiBlast_CBE 87.9932% -77 - C3 -3KRU - ? -
3 PsiBlast_PDB 87.9032% -76 - C3 -3KRU - ? -
25 PsiBlast_CBE 87.8532% -77 - C3 -3KRU - ? -
44 HHSearch 87.6327% -72 - C3 -3HGJ - ? -
37 HHSearch 87.6130% -69 - C3 -1Z41 - NAMA_BACSU -
23 PsiBlast_CBE 87.5432% -75 - C3 -3KRZ - ? -
4 PsiBlast_PDB 87.1932% -77 - C3 -3KRZ - ? -
11 PsiBlast_PDB 86.4031% -76 - C3 -1VJI 9.5 OPR1_ARATH
43 HHSearch 86.2632% -69 - C3 -3KRU - ? -
12 PsiBlast_PDB 85.9431% -77 - C3 -2Q3R 5.6 OPR1_ARATH
47 HHSearch 84.2125% -73 - C3 -1ICP - OPR1_SOLLC -
41 HHSearch 84.2029% -69 * C3 *3GR7 - NAMA_GEOKA -
45 HHSearch 83.6624% -73 - C3 -2HSA - OPR3_SOLLC -
33 PsiBlast_CBE 65.5733% -49 - C3 -1ICP 5.9 OPR1_SOLLC
34 PsiBlast_CBE 65.2633% -49 - C3 -1ICP 6.0 OPR1_SOLLC
27 PsiBlast_CBE 65.1833% -47 - C3 -3HGR 6.1 OPR1_SOLLC
31 PsiBlast_CBE 65.1433% -49 - C3 -1ICQ 5.9 OPR1_SOLLC
30 PsiBlast_CBE 65.0333% -44 - C3 -1ICS 6.2 OPR1_SOLLC
32 PsiBlast_CBE 64.9133% -44 - C3 -1ICQ 5.9 OPR1_SOLLC
28 PsiBlast_CBE 64.6833% -49 - C3 -3HGR 5.7 OPR1_SOLLC
29 PsiBlast_CBE 64.3133% -45 - C3 -1ICS 6.0 OPR1_SOLLC