@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0851: (2016-03-19 )
MNNVLLEVKDLETSLKINNEWLATVENISFELSKGEVLGIVGESGCGKSILSKSIIKLLPEKISKLSSGEVIFDGKRIDTLNEKQLLDIRGNDIAMIFQEPMTALNPVFTIKNQLVESIKSHKKISKKEANNLAKDLLKKVGIARQDEILNSYPHQLSGGMRQRVMIAMAISCSPKLLIADEPTTALDVTIQAQILDLLKELQKETQMAIMMITHDLSVVAEFCDKVLVMYAGQIVEFGGIKEILHNPKHPYTQKLLSTIPKLKEGQKRLETIEGIVPSIQAFHVNKCRFANRCNKKLDICNNQSPKMHVCEDVIVRCHLYKNEYKEI

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




1 PsiBlast_PDB 91.5036%-111 - C1 -4FWI - ? -
77 Fugue 81.4427%-102 - C1 -3TUZ - METN_ECOLI -
86 HHSearch 76.6231%-122 - C1 -3TUI - METN_ECOLI -
22 PsiBlast_CBE 76.5933%-113 - C1 -4U02 - ? -
3 PsiBlast_PDB 75.4433%-107 - C1 -4U02 - ? -
2 PsiBlast_PDB 74.7133%-111 - C1 -4U00 - ? -
23 PsiBlast_CBE 74.5433%-108 - C1 -4U02 - ? -
21 PsiBlast_CBE 74.3033%-108 - C1 -4U02 - ? -
6 PsiBlast_PDB 74.2232%-120 - C1 -3TUZ - METN_ECOLI -
5 PsiBlast_PDB 73.7832%-115 - C1 -3TUI - METN_ECOLI -
29 PsiBlast_CBE 72.9932%-112 - C1 -3TUI - METN_ECOLI -
39 PsiBlast_CBE 72.8031%-120 - C1 -2OLK - ? -
102 HHSearch 72.6832%-116 * C1 *2OLJ - ? -
33 PsiBlast_CBE 72.6831%-121 - C1 -3C4J - ? -
15 PsiBlast_PDB 72.5631%-118 - C1 -2OLK - ? -
32 PsiBlast_CBE 72.3431%-115 - C1 -3C41 - ? -
25 PsiBlast_CBE 72.2432%-114 - C1 -3TUZ - METN_ECOLI -
14 PsiBlast_PDB 72.2331%-118 - C1 -2OLJ - ? -
42 PsiBlast_CBE 72.1632%-126 - C1 -3GFO - ECFA3_CLOP1 -
27 PsiBlast_CBE 72.0332%-120 - C1 -3TUI - METN_ECOLI -
30 PsiBlast_CBE 70.2237%-108 - C1 -4YMV 3.5 ?
10 PsiBlast_PDB 70.0137%-109 - C1 -4YMV 5.1 ?
31 PsiBlast_CBE 69.8837%-108 - C1 -4YMU 4.1 ?
9 PsiBlast_PDB 69.8137%-107 - C1 -4YMU 4.4 ?
60 PsiBlast_CBE 54.9531% -95 - C1 -2FGK 3.7 HLYBP_ECOLX
62 PsiBlast_CBE 54.6331% -97 - C1 -2FGK 4.3 HLYBP_ECOLX
59 PsiBlast_CBE 53.7131% -89 - C1 -2FGK 4.3
61 PsiBlast_CBE 53.6031% -89 - C1 -2FGK 4.1 HLYBP_ECOLX
63 PsiBlast_CBE 53.3831% -91 - C1 -2FFB 4.0
68 PsiBlast_CBE 53.3731% -92 - C1 -2FFA 3.9
70 PsiBlast_CBE 52.5931% -94 - C1 -1XEF 4.6 HLYBP_ECOLX
56 PsiBlast_CBE 52.5931% -92 - C1 -2FF7 3.9
71 PsiBlast_CBE 52.5331% -93 - C1 -1XEF 4.5 HLYBP_ECOLX
64 PsiBlast_CBE 52.5031% -92 - C1 -2FGJ 4.5
55 PsiBlast_CBE 52.4831% -94 - C1 -2PMK 4.5
58 PsiBlast_CBE 52.4431% -93 - C1 -3B5J 4.7
67 PsiBlast_CBE 52.0931% -91 - C1 -2FGJ 4.1 HLYBP_ECOLX
72 PsiBlast_CBE 52.0631% -90 - C1 -1XEF 3.7 HLYBP_ECOLX
66 PsiBlast_CBE 52.0031% -94 - C1 -2FGJ 3.9 HLYBP_ECOLX
69 PsiBlast_CBE 51.5431% -93 - C1 -1XEF 4.4
65 PsiBlast_CBE 50.3231% -85 - C1 -2FGJ 4.3 HLYBP_ECOLX