@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1013: (2016-03-21 )
MAKIVVALGGNALGKSPQEQLELVKNTAKSLVGLITKGHEIVISHGNGPQVGSINLGLNYAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDKQVVTLVTQVEVDENDPAFNNPSKPIGLFYNKEEAEQIQKEKGFIFVEDAGRGYRRVVPSPQPISIIELESIKTLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLGANIQCDQLIILTAIDYVYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAAISFIENNPKGSVLITSLNELDAALEGKVGTVIKK

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(4JZ7)
?
[Raw transfer]



ANP_D_8(4JZ7)
?
[Raw transfer]



ANP_B_6(4JZ7)
?
[Raw transfer]



ANP_C_7(4JZ7)
?
[Raw transfer]



ADP_C_9(2WE5)
ARCC1_ENTFA
[Raw transfer]



ADP_B_5(1E19)
CPKA_PYRFU
[Raw transfer]



ADP_A_4(2WE5)
ARCC1_ENTFA
[Raw transfer]



ADP_A_4(2WE5)
ARCC1_ENTFA
[Raw transfer]



ADP_A_3(1E19)
CPKA_PYRFU
[Raw transfer]



ADP_B_7(2WE5)
ARCC1_ENTFA
[Raw transfer]



ADP_A_3(1E19)
CPKA_PYRFU
[Raw transfer]



GOL_B_5(3KZF)
?
[Raw transfer]



GOL_D_6(3KZF)
?
[Raw transfer]



GOL_C_7(3KZF)
?
[Raw transfer]



CIT_D_8(4JZ8)
?
[Raw transfer]



CIT_B_6(4JZ8)
?
[Raw transfer]



CIT_B_8(4OLC)
?
[Raw transfer]



CIT_A_5(4JZ8)
?
[Raw transfer]



CIT_D_11(4OLC)
?
[Raw transfer]



CIT_C_7(4JZ8)
?
[Raw transfer]



CIT_A_5(4OLC)
?
[Raw transfer]



CIT_B_6(4JZ9)
?
[Raw transfer]



CIT_A_5(4JZ9)
?
[Raw transfer]



CIT_D_8(4JZ9)
?
[Raw transfer]



CIT_C_9(4OLC)
?
[Raw transfer]



CIT_C_7(4JZ9)
?
[Raw transfer]
21 PsiBlast_CBE 96.9946% -95 - C2 -1E19 5.9 CPKA_PYRFU
1 PsiBlast_PDB 96.6446% -92 - C2 -1E19 6.8 CPKA_PYRFU
22 PsiBlast_CBE 95.4948% -91 - C2 -2WE5 6.1 ARCC1_ENTFA
4 PsiBlast_PDB 95.1848% -92 - C2 -2WE5 6.1 ARCC1_ENTFA
3 PsiBlast_PDB 94.8348% -89 - C2 -2WE4 - ARCC1_ENTFA -
23 PsiBlast_CBE 94.7748% -94 - C2 -2WE5 6.0 ARCC1_ENTFA
25 PsiBlast_CBE 94.6048% -91 - C2 -2WE4 - ARCC1_ENTFA -
28 PsiBlast_CBE 94.4748% -90 - C2 -1B7B - ARCC1_ENTFC -
74 Fugue 94.2949% -86 - C2 -1B7B - ARCC1_ENTFC -
2 PsiBlast_PDB 93.9548% -91 - C2 -1B7B - ARCC1_ENTFC -
29 PsiBlast_CBE 93.8948% -88 - C2 -1B7B - ARCC1_ENTFC -
73 Fugue 93.8748% -91 - C2 -1B7B - ARCC1_ENTFC -
53 HHSearch 93.7845% -93 * C2 *1E19 4.7 CPKA_PYRFU
26 PsiBlast_CBE 93.6948% -91 - C2 -2WE4 - ARCC1_ENTFA -
27 PsiBlast_CBE 93.3448% -90 - C2 -1B7B - ARCC1_ENTFC -
24 PsiBlast_CBE 93.1548% -87 - C2 -2WE4 - ARCC1_ENTFA -
5 PsiBlast_PDB 91.1640% -90 - C2 -2E9Y - ? -
40 PsiBlast_CBE 89.5841% -94 - C2 -4JZ7 6.6 ?
8 PsiBlast_PDB 89.5841% -88 - C2 -4JZ9 3.1 ?
39 PsiBlast_CBE 89.1241% -95 - C2 -4JZ7 5.6 ?
34 PsiBlast_CBE 89.0941% -91 - C2 -4JZ9 3.6 ?
35 PsiBlast_CBE 89.0041% -84 - C2 -4JZ9 3.2 ?
33 PsiBlast_CBE 88.2841% -88 - C2 -4JZ9 3.3 ?
30 PsiBlast_CBE 87.8141% -88 - C2 -4OLC 2.9 ?
31 PsiBlast_CBE 87.5741% -92 - C2 -4OLC 3.6 ?
32 PsiBlast_CBE 87.5341% -86 - C2 -4OLC 3.0 ?
38 PsiBlast_CBE 87.3841% -88 - C2 -4JZ8 4.0 ?
7 PsiBlast_PDB 87.3241% -86 - C2 -4JZ8 2.7 ?
37 PsiBlast_CBE 87.2741% -88 - C2 -4JZ8 3.3 ?
9 PsiBlast_PDB 87.0341% -89 - C2 -4OLC 3.0 ?
36 PsiBlast_CBE 86.5541% -88 - C2 -4JZ8 3.5 ?
44 PsiBlast_CBE 85.2841% -94 - C2 -3KZF 3.0 ?
43 PsiBlast_CBE 83.6741% -92 - C2 -3KZF 2.8 ?
6 PsiBlast_PDB 83.5441% -98 - C2 -4JZ7 6.1 ?
41 PsiBlast_CBE 82.4241% -91 - C2 -4JZ7 6.2 ?
51 HHSearch 82.2443% -88 - C2 -2WE5 6.1 ARCC1_ENTFA
42 PsiBlast_CBE 81.9841% -91 - C2 -3KZF 2.1 ?