@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1047: (2016-03-21 )
MKDLPIIALDFESKEKVNQFLDLFDESLFVKVGMELFYQEGPQLINEIKERGHDVFLDLKLHDIPNTVGKAMEGLAKLNVDLVNVHAAGGVKMMSEAIKGLRKHNQHTKIIAVTQLTSTTEDMLRHEQNIQTSIEEAVLNYAKLANAAGLDGVVCSPLESRMLTEKLGTSFLKVTPGIRPKGASQDDQHRITTPEEARQLGSTHIVVGRPITQSDNPVESYHKIKESWLV

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BMQ_G_7(1EIX)
PYRF_ECOLI
[Raw transfer]




BMQ_E_5(1EIX)
PYRF_ECOLI
[Raw transfer]




BMQ_F_6(1EIX)
PYRF_ECOLI
[Raw transfer]




BMQ_E_5(1EIX)
PYRF_ECOLI
[Raw transfer]




BMQ_H_8(1EIX)
PYRF_ECOLI
[Raw transfer]




U5P_G_7(1DBT)
PYRF_BACSU
[Raw transfer]




U5P_H_8(1DBT)
PYRF_BACSU
[Raw transfer]




U5P_E_5(1DBT)
PYRF_BACSU
[Raw transfer]




C5P_A_3(2YYU)
PYRF_GEOKA
[Raw transfer]




U5P_E_5(1DBT)
PYRF_BACSU
[Raw transfer]




C5P_A_3(2YYU)
PYRF_GEOKA
[Raw transfer]




U5P_E_5(1DBT)
PYRF_BACSU
[Raw transfer]




C5P_B_4(2YYU)
PYRF_GEOKA
[Raw transfer]




U5P_A_3(3UWQ)
PYRF_VIBCH
[Raw transfer]




EDO_A_4(1VQT)
PYRF_THEMA
[Raw transfer]




EDO_A_9(1VQT)
PYRF_THEMA
[Raw transfer]




DTT_C_3(2CZD)
PYRF_PYRHO
[Raw transfer]




EDO_A_9(1VQT)
PYRF_THEMA
[Raw transfer]




PEG_A_5(3UWQ)
PYRF_VIBCH
[Raw transfer]




XPE_A_4(3UWQ)
PYRF_VIBCH
[Raw transfer]




PGE_A_7(3UWQ)
PYRF_VIBCH
[Raw transfer]




50 HHSearch 94.9354% -97 - C1 -2YYU 4.3 PYRF_GEOKA
21 PsiBlast_CBE 94.6953%-104 - C1 -2YYU 3.6 PYRF_GEOKA
2 PsiBlast_PDB 93.7853%-105 - C1 -2YYU 4.3 PYRF_GEOKA
23 PsiBlast_CBE 93.4353%-100 - C1 -1DBT 7.1 PYRF_BACSU
22 PsiBlast_CBE 93.2353% -99 - C1 -1DBT 7.5 PYRF_BACSU
46 HHSearch 92.8154% -89 - C1 -1DBT 6.9 PYRF_BACSU
3 PsiBlast_PDB 92.7753% -94 - C1 -1DBT - PYRF_BACSU -
1 PsiBlast_PDB 91.2253%-114 - C1 -2YYT - PYRF_GEOKA -
32 Fugue 90.1652% -87 - C1 -1DBT 6.9 PYRF_BACSU
33 Fugue 88.9853% -84 - C1 -1DBT 6.9 PYRF_BACSU
42 HHSearch 86.4341% -88 - C1 -1EIX 6.4 PYRF_ECOLI
53 HHSearch 85.7643% -92 - C1 -3LDV - PYRF_VIBCH -
7 PsiBlast_PDB 85.3041% -90 - C1 -1EIX 6.4 PYRF_ECOLI
26 PsiBlast_CBE 84.5541% -91 - C1 -1EIX 6.0 PYRF_ECOLI
27 PsiBlast_CBE 84.4441% -91 - C1 -1EIX 6.4 PYRF_ECOLI
28 PsiBlast_CBE 84.0141% -87 - C1 -1EIX 6.4 PYRF_ECOLI
55 HHSearch 83.9839% -99 * C1 *3RU6 - PYRF_CAMJE -
30 PsiBlast_CBE 83.6939%-106 - C1 -3RU6 - PYRF_CAMJE -
9 PsiBlast_PDB 83.1939%-105 - C1 -3RU6 - PYRF_CAMJE -
24 PsiBlast_CBE 83.1545%-102 - C1 -3UWQ 2.6 PYRF_VIBCH
6 PsiBlast_PDB 82.6945%-106 - C1 -3UWQ 6.0 PYRF_VIBCH
12 PsiBlast_PDB 63.6830% -98 - C1 -1VQT 3.1 PYRF_THEMA
59 HHSearch 56.9431% -66 - C1 -1VQT 3.0 PYRF_THEMA