@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1517: (2016-03-26 )
MTAEKITQGTEGLNVPNEPIIPFIIGDGIGPDIWKAASRVIDAAVEKAYNGEKRIEWKEVLAGQKAFDTTGEWLPQETLDTIKEYLIAVKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTTEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLVHKGNIMKFTEGSFKQWGYDLALSEFGDQVFTWQQYDEIVENEGRDAANAAQEKAEKEGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYAGLNKVNPSSVILSSVLMLEHLGWQEAADKITDSIEDTIASKVVTYDFARLMDGAEEVSTSAFADELIKNLK

Atome Classification :

(42 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ICT_A_3(4AJ3)
IDH_ECOLI
[Raw transfer]



CIT_A_3(1HQS)
IDH_BACSU
[Raw transfer]



ICT_E_5(1PB1)
IDH_ECOLI
[Raw transfer]



CIT_A_3(1HQS)
IDH_BACSU
[Raw transfer]



ICT_A_4(1CW1)
IDH_ECOLI
[Raw transfer]



ICT_A_3(5ICD)
IDH_ECOLI
[Raw transfer]



ICA_A_3(1AI2)
IDH_ECOLI
[Raw transfer]



ICT_A_3(8ICD)
IDH_ECOLI
[Raw transfer]



ICT_A_3(1GRP)
IDH_ECOLI
[Raw transfer]



ICT_A_3(1GRO)
IDH_ECOLI
[Raw transfer]



ICT_A_4(1CW7)
IDH_ECOLI
[Raw transfer]



ICT_A_4(1P8F)
IDH_ECOLI
[Raw transfer]



ICT_A_2(4BNP)
IDH_ECOLI
[Raw transfer]



CIT_F_6(2D1C)
IDH_THET8
[Raw transfer]



AKG_A_4(4AJR)
IDH_ECOLI
[Raw transfer]



AKG_A_3(1BL5)
IDH_ECOLI
[Raw transfer]



AKG_A_4(1CW4)
IDH_ECOLI
[Raw transfer]



NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]



NAP_A_3(4AJR)
IDH_ECOLI
[Raw transfer]



NAP_D_4(2D1C)
IDH_THET8
[Raw transfer]



NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]



NAP_A_2(4AJ3)
IDH_ECOLI
[Raw transfer]



NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]



IPM_A_4(1HJ6)
IDH_ECOLI
[Raw transfer]



NAP_A_5(1HJ6)
IDH_ECOLI
[Raw transfer]



NAP_A_2(1AI2)
IDH_ECOLI
[Raw transfer]



NAP_A_3(2E5M)
?
[Raw transfer]



NAP_B_4(2E5M)
?
[Raw transfer]



NAP_A_5(1XKD)
?
[Raw transfer]



NAP_B_7(1XKD)
?
[Raw transfer]



NDO_A_2(1AI3)
IDH_ECOLI
[Raw transfer]



TAP_A_2(4AJA)
IDH_ECOLI
[Raw transfer]



GOL_A_6(3TY4)
LYS12_SCHPO
[Raw transfer]



TAP_A_2(4AJB)
IDH_ECOLI
[Raw transfer]



A2P_A_2(4AJS)
IDH_ECOLI
[Raw transfer]



NAP_C_3(9ICD)
IDH_ECOLI
[Raw transfer]



A2P_A_2(4AJC)
IDH_ECOLI
[Raw transfer]



AMP_I_9(1ISO)
IDH_ECOLI
[Raw transfer]



TRS_A_2(2Y3Z)
LEU3_THET8
[Raw transfer]
53 HHSearch 99.1179% -87 - C6 -1HQS 3.9 IDH_BACSU
1 PsiBlast_PDB 98.6878% -88 - C6 -1HQS 3.9 IDH_BACSU
54 HHSearch 93.5460% -83 - C6 -2D4V - ? -
32 PsiBlast_CBE 93.2460% -87 - C6 -2D4V - ? -
35 PsiBlast_CBE 92.2660% -86 - C6 -2D4V - ? -
34 PsiBlast_CBE 92.1860% -87 - C6 -2D4V - ? -
33 PsiBlast_CBE 92.0760% -85 - C6 -2D4V - ? -
23 PsiBlast_CBE 91.0462% -82 - C6 -4AJR 9.4 IDH_ECOLI
6 PsiBlast_PDB 91.0262% -79 - C6 -1PB3 - IDH_ECOLI -
5 PsiBlast_PDB 90.6862% -81 - C6 -1PB1 4.0 IDH_ECOLI
24 PsiBlast_CBE 90.6062% -81 - C6 -4AJC 5.1 IDH_ECOLI
25 PsiBlast_CBE 90.5462% -79 - C6 -4AJB 6.7 IDH_ECOLI
10 PsiBlast_PDB 90.4962% -82 - C6 -3ICD - IDH_ECOLI -
14 PsiBlast_PDB 90.4562% -78 - C6 -4AJ3 9.0 IDH_ECOLI
56 HHSearch 90.4365% -82 - C6 -3DMS - ? -
4 PsiBlast_PDB 90.4262% -80 - C6 -1P8F 3.3 IDH_ECOLI
22 PsiBlast_CBE 90.3562% -78 - C6 -4AJS 5.6 IDH_ECOLI
27 PsiBlast_CBE 90.2762% -81 - C6 -1CW1 4.1 IDH_ECOLI
26 PsiBlast_CBE 90.1762% -81 - C6 -1CW4 3.1 IDH_ECOLI
17 PsiBlast_PDB 90.1162% -79 - C6 -1HJ6 8.6 IDH_ECOLI
12 PsiBlast_PDB 90.1062% -80 - C6 -9ICD 5.2 IDH_ECOLI
15 PsiBlast_PDB 90.0962% -80 - C6 -4AJA 6.8 IDH_ECOLI
29 PsiBlast_CBE 90.0662% -80 - C6 -1GRP 3.2 IDH_ECOLI
7 PsiBlast_PDB 89.7362% -81 - C6 -1AI2 6.9 IDH_ECOLI
2 PsiBlast_PDB 89.7162% -78 - C6 -1BL5 3.7 IDH_ECOLI
28 PsiBlast_CBE 89.6462% -77 - C6 -1CW7 3.2 IDH_ECOLI
30 PsiBlast_CBE 89.6362% -79 - C6 -1GRO 3.0 IDH_ECOLI
8 PsiBlast_PDB 89.6062% -80 - C6 -1AI3 6.3 IDH_ECOLI
11 PsiBlast_PDB 89.5562% -80 - C6 -5ICD 3.5 IDH_ECOLI
21 PsiBlast_CBE 89.5362% -78 - C6 -4BNP 4.1 IDH_ECOLI
31 PsiBlast_CBE 89.2961% -79 - C6 -1ISO 3.7 IDH_ECOLI
19 PsiBlast_PDB 89.1562% -78 - C6 -8ICD 3.6 IDH_ECOLI
40 PsiBlast_CBE 82.9947% -83 - C6 -1XKD 6.9 ?
39 PsiBlast_CBE 82.4948% -85 - C6 -2E5M 7.1 ?
38 PsiBlast_CBE 82.2648% -85 - C6 -2E5M 7.1 ?
41 PsiBlast_CBE 82.2247% -85 - C6 -1XKD 7.6 ?
76 Fugue 74.8236% -66 - C6 -2D1C 7.4 IDH_THET8
59 HHSearch 72.3938% -74 - C6 -2D1C 8.4 IDH_THET8
62 HHSearch 70.3330% -80 - C6 -3TY4 2.9 LYS12_SCHPO
43 PsiBlast_CBE 69.7635% -58 - C6 -2D1C 8.4 IDH_THET8
44 PsiBlast_CBE 69.3835% -59 - C6 -2D1C 8.4 IDH_THET8
72 HHSearch 69.0831% -75 - C6 -2Y3Z 3.5 LEU3_THET8