@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2021: (2016-03-31 )
MEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKDIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPHDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIASVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTATEIFDHAEELTRIGLDLPFPIKINQMLGHQTSFLTYEGLVDQL

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ANP_A_6(4ZIR)
ECFA2_THEMA
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_9(4HLU)
ECFA2_THEMA
[Raw transfer]




ADP_A_5(4HLU)
ECFA2_THEMA
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AGS_A_3(4S0F)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AGS_B_4(4S0F)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




1 PsiBlast_PDB 85.5945% -92 - C1 -4HUQ - ECFA1_LACBA -
2 PsiBlast_PDB 83.1845% -94 - C1 -4HZU - ECFA1_LACBA -
21 PsiBlast_CBE 81.4140% -99 - C1 -4MKI 3.9 ECFA2_CALS4
3 PsiBlast_PDB 81.3740% -99 - C1 -4MKI - ECFA2_CALS4 -
125 HHSearch 75.8338%-101 - C1 -3GFO - ECFA3_CLOP1 -
4 PsiBlast_PDB 74.0538%-101 - C1 -3GFO - ECFA3_CLOP1 -
117 Fugue 73.6331%-106 - C1 -3TUZ - METN_ECOLI -
128 HHSearch 73.0835%-100 * C1 *3TUI - METN_ECOLI -
7 PsiBlast_PDB 72.8034% -99 - C1 -3TUI - METN_ECOLI -
22 PsiBlast_CBE 72.6037% -99 - C1 -1Z47 - ? -
11 PsiBlast_PDB 72.0334% -99 - C1 -3TIF - Y796_METJA -
29 PsiBlast_CBE 72.0034%-100 - C1 -3TUI - METN_ECOLI -
5 PsiBlast_PDB 71.9037% -97 - C1 -1Z47 - ? -
31 PsiBlast_CBE 71.3734%-103 - C1 -3TIF 4.1 Y796_METJA
8 PsiBlast_PDB 71.2334%-101 - C1 -3TUZ - METN_ECOLI -
28 PsiBlast_CBE 71.1534% -96 - C1 -3TUI - METN_ECOLI -
124 HHSearch 69.9736% -92 - C1 -1Z47 - ? -
25 PsiBlast_CBE 69.8334% -97 - C1 -3TUZ - METN_ECOLI -
34 PsiBlast_CBE 69.4934% -88 - C1 -4U02 - ? -
119 Fugue 69.4133% -81 - C1 -1Z47 - ? -
30 PsiBlast_CBE 68.8435%-102 - C1 -1L2T 3.7 Y796_METJA
48 PsiBlast_CBE 66.3632% -92 - C1 -2OLK 4.6 ?
50 PsiBlast_CBE 66.2632% -92 - C1 -2OLK 4.4 ?
23 PsiBlast_CBE 65.7837% -98 - C1 -4HLU 5.9 ECFA1_THEMA
17 PsiBlast_PDB 65.6435% -91 - C1 -4YMU 4.9 ?
47 PsiBlast_CBE 65.5632% -89 - C1 -2OLK 4.5 ?
35 PsiBlast_CBE 65.5535% -91 - C1 -4YMV 4.2 ?
13 PsiBlast_PDB 65.4834% -89 - C1 -4U00 4.6 ?
52 PsiBlast_CBE 64.6032% -89 - C1 -2OLJ 4.5 ?
18 PsiBlast_PDB 64.5135% -96 - C1 -4YMV 4.6 ?
36 PsiBlast_CBE 64.3135% -92 - C1 -4YMU 4.7 ?
49 PsiBlast_CBE 64.2432% -89 - C1 -2OLK 4.5 ?
54 PsiBlast_CBE 64.0332% -88 - C1 -3C41 5.0 ?
84 PsiBlast_CBE 63.2635% -77 - C1 -4HLU 4.5 ECFA2_THEMA
42 PsiBlast_CBE 62.8932% -90 - C1 -2Q0H 4.0 ?
40 PsiBlast_CBE 62.6032% -85 - C1 -3C4J 4.9 ?
83 PsiBlast_CBE 62.5935% -78 - C1 -4HLU 4.4 ECFA2_THEMA
53 PsiBlast_CBE 61.6032% -94 - C1 -3C41 3.9 ?
39 PsiBlast_CBE 61.5832% -91 - C1 -3C4J 3.7 ?
51 PsiBlast_CBE 61.5432% -86 - C1 -2OLJ 4.1 ?
41 PsiBlast_CBE 60.2532% -88 - C1 -2Q0H 4.7 ?
85 PsiBlast_CBE 60.0935% -84 - C1 -4ZIR 4.3 ECFA2_THEMA
92 PsiBlast_CBE 56.2233% -91 - C1 -4S0F 4.3 ?
91 PsiBlast_CBE 54.3033% -90 - C1 -4S0F 2.6 ?
57 PsiBlast_CBE 53.0931% -96 - C1 -2FF7 6.3
56 PsiBlast_CBE 51.3231% -96 - C1 -2PMK 7.2
82 PsiBlast_CBE 50.4331% -93 - C1 -3B5J 6.7