@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2098: (2016-04-01 )
MEKVYVAGAIPEVGLKLLQEHFEVEMYEGKGLVDKDTLIKGVKNATALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTVYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIVANAAISAVQGEKPQFVVN

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_7(2DBZ)
GYAR_PYRHO
[Raw transfer]




NDP_J_10(2GCG)
GRHPR_HUMAN
[Raw transfer]




NAI_A_2(4U6Q)
CTBP1_HUMAN
[Raw transfer]




NAP_B_8(2DBZ)
GYAR_PYRHO
[Raw transfer]




NAP_A_4(2DBQ)
GYAR_PYRHO
[Raw transfer]




NAP_A_4(2DBQ)
GYAR_PYRHO
[Raw transfer]




NDP_L_12(2GCG)
GRHPR_HUMAN
[Raw transfer]




NAD_B_2(1MX3)
CTBP1_HUMAN
[Raw transfer]




NDP_K_11(2GCG)
GRHPR_HUMAN
[Raw transfer]




NAD_B_2(1MX3)
CTBP1_HUMAN
[Raw transfer]




NAD_B_2(1MX3)
CTBP1_HUMAN
[Raw transfer]




NAD_A_2(1HKU)
CTBP1_RAT
[Raw transfer]




NDP_J_10(2GCG)
GRHPR_HUMAN
[Raw transfer]




GOL_A_5(2DBQ)
GYAR_PYRHO
[Raw transfer]




FMT_A_4(1HKU)
CTBP1_RAT
[Raw transfer]




FMT_A_3(3GA0)
CTBP1_RAT
[Raw transfer]




3CR_A_3(4U6Q)
CTBP1_HUMAN
[Raw transfer]




PPY_A_3(4U6S)
CTBP1_HUMAN
[Raw transfer]




KMT_A_3(4LCE)
CTBP1_HUMAN
[Raw transfer]




ACY_C_3(1MX3)
CTBP1_HUMAN
[Raw transfer]




26 PsiBlast_CBE 95.9946%-112 - C1 -2DBR - GYAR_PYRHO -
1 PsiBlast_PDB 95.1146%-114 * C1 *2DBR - GYAR_PYRHO -
25 PsiBlast_CBE 95.0146%-111 - C1 -2DBR - GYAR_PYRHO -
3 PsiBlast_PDB 94.6745%-110 - C1 -2DBQ 6.7 GYAR_PYRHO
2 PsiBlast_PDB 94.4246%-110 - C1 -2DBZ 6.1 GYAR_PYRHO
23 PsiBlast_CBE 94.3846%-107 - C1 -2DBR - GYAR_PYRHO -
24 PsiBlast_CBE 94.2646%-111 - C1 -2DBR - GYAR_PYRHO -
112 HHSearch 94.2146%-108 - C1 -2DBQ 6.7 GYAR_PYRHO
22 PsiBlast_CBE 94.0246%-108 - C1 -2DBR - GYAR_PYRHO -
21 PsiBlast_CBE 93.5646%-111 - C1 -2DBZ 5.9 GYAR_PYRHO
32 PsiBlast_CBE 89.6235%-110 - C1 -2GCG 5.9 GRHPR_HUMAN
31 PsiBlast_CBE 89.2235%-109 - C1 -2GCG 6.9 GRHPR_HUMAN
105 Fugue 88.8334%-100 - C1 -1YGY - SERA_MYCTU -
29 PsiBlast_CBE 88.7635%-111 - C1 -2WWR - GRHPR_HUMAN -
5 PsiBlast_PDB 88.3635%-108 - C1 -2GCG 7.5 GRHPR_HUMAN
28 PsiBlast_CBE 88.2335%-112 - C1 -2WWR - GRHPR_HUMAN -
30 PsiBlast_CBE 88.1235%-109 - C1 -2GCG - GRHPR_HUMAN -
123 HHSearch 88.0243%-106 - C1 -1WWK - ? -
6 PsiBlast_PDB 87.8735%-109 - C1 -2WWR - GRHPR_HUMAN -
38 PsiBlast_CBE 87.1937%-115 - C1 -2CUK - ? -
114 HHSearch 84.4034%-100 - C1 -2GCG 7.4 GRHPR_HUMAN
103 Fugue 77.2133% -89 - C1 -1MX3 8.3 CTBP1_HUMAN
126 HHSearch 76.1832% -90 - C1 -1MX3 8.3 CTBP1_HUMAN
40 PsiBlast_CBE 72.1337% -89 - C1 -4U6S 2.8 CTBP1_HUMAN
49 PsiBlast_CBE 72.1136% -99 - C1 -3GA0 2.8 CTBP1_RAT
41 PsiBlast_CBE 71.8837% -86 - C1 -4U6Q 9.3 CTBP1_HUMAN
43 PsiBlast_CBE 70.5237% -88 - C1 -1MX3 8.3 CTBP1_HUMAN
42 PsiBlast_CBE 70.4837% -85 - C1 -4LCE 2.1 CTBP1_HUMAN
46 PsiBlast_CBE 69.8537% -86 - C1 -1HKU 7.8 CTBP1_RAT