@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2346: (2016-04-03 )
MTKIKIMSVRDEDMPYIKAWAEKHHVEVDITKEALTDDNVEGVAGYDGLSLSQQIPLSEHVYKRLNELGIKQIAQRSAGFDTYDLELANKYNLIVSNVPSYSPNSIAEFAVNQAINVVRHFNQIQTKVREHDFRWEPTILSKSIKDLKVAVIGTGRIGRVVADIFANGYQSDVVAYDPFPNAKIATYVDYKDTIEEAVEGADIVTLHVPATKYNHYLFNAELFKHFKKGAVFVNCARGSLVDTKALLDALDNGVIKGAALDTYEFERKLFPSDQRGKTPNDPLLESLIDREDVILTPHIAFYTEAAVKNLIVDALDATLDVLQTGDTRLRVN

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_2(4U6S)
CTBP1_HUMAN
[Raw transfer]



NAD_B_4(4XKJ)
?
[Raw transfer]



NAI_A_2(4U6Q)
CTBP1_HUMAN
[Raw transfer]



NAD_A_2(1HKU)
CTBP1_RAT
[Raw transfer]



NAD_D_4(1J49)
LDHD_LACDA
[Raw transfer]



NAD_E_5(2HU2)
CTBP1_RAT
[Raw transfer]



NAD_A_3(4XKJ)
?
[Raw transfer]



NAD_B_5(2DLD)
LDHD_LACHE
[Raw transfer]



NAD_A_4(1DXY)
DHD2_LACPA
[Raw transfer]



NAD_A_4(1DXY)
DHD2_LACPA
[Raw transfer]



NAD_E_5(1J49)
LDHD_LACDA
[Raw transfer]



NAD_A_3(2DLD)
LDHD_LACHE
[Raw transfer]



NAD_A_3(4PRL)
?
[Raw transfer]



NAD_B_2(1MX3)
CTBP1_HUMAN
[Raw transfer]



NAD_B_4(4PRL)
?
[Raw transfer]



NAD_A_2(4LCE)
CTBP1_HUMAN
[Raw transfer]



GOL_A_9(3WWY)
?
[Raw transfer]



GOL_A_9(3WWY)
?
[Raw transfer]



FMT_A_4(1HKU)
CTBP1_RAT
[Raw transfer]



KMT_A_3(4LCE)
CTBP1_HUMAN
[Raw transfer]



COI_A_5(1DXY)
DHD2_LACPA
[Raw transfer]



ACY_C_3(1MX3)
CTBP1_HUMAN
[Raw transfer]



3CR_A_3(4U6Q)
CTBP1_HUMAN
[Raw transfer]



FMT_A_2(3GA0)
CTBP1_RAT
[Raw transfer]



GOL_A_14(3JTM)
FDH_ARATH
[Raw transfer]



COI_A_5(1DXY)
?
[Raw transfer]



NAD_A_4(1DXY)
?
[Raw transfer]



FMT_G_7(2HU2)
CTBP1_RAT
[Raw transfer]
91 HHSearch 92.7037%-112 - C2 -1J4A - LDHD_LACDA -
28 PsiBlast_CBE 91.4338%-108 - C2 -4XKJ 4.1 ?
23 PsiBlast_CBE 91.3638%-111 - C2 -2YQ5 - ? -
24 PsiBlast_CBE 91.0038%-111 - C2 -2YQ5 - ? -
7 PsiBlast_PDB 90.9138%-107 - C2 -4XKJ 4.6 ?
88 HHSearch 90.6531%-111 - C2 -3WWY 3.1 ?
27 PsiBlast_CBE 90.6037%-112 - C2 -1J4A - LDHD_LACDA -
2 PsiBlast_PDB 90.5838%-112 - C2 -1J49 6.1 LDHD_LACDA
26 PsiBlast_CBE 90.5037%-113 - C2 -1J4A - LDHD_LACDA -
8 PsiBlast_PDB 90.5033%-111 - C2 -1XDW - ? -
5 PsiBlast_PDB 90.4337%-110 - C2 -1J4A - LDHD_LACDA -
11 PsiBlast_PDB 90.3631%-105 - C2 -3WWZ - ? -
92 HHSearch 90.2231%-105 - C2 -3WWZ - ? -
25 PsiBlast_CBE 90.1537%-114 - C2 -1J4A - LDHD_LACDA -
3 PsiBlast_PDB 89.3338%-112 - C2 -2YQ4 - ? -
4 PsiBlast_PDB 89.0938%-109 - C2 -2YQ5 - ? -
13 PsiBlast_PDB 88.8830%-110 - C2 -3WWY 3.1 ?
21 PsiBlast_CBE 88.8037%-113 - C2 -2DLD 5.5 LDHD_LACHE
1 PsiBlast_PDB 88.6037%-115 - C2 -2DLD 5.1 LDHD_LACHE
89 HHSearch 88.1533%-109 - C2 -1XDW - ? -
22 PsiBlast_CBE 88.0138%-108 - C2 -1J49 8.2 LDHD_LACDA
87 HHSearch 87.9333%-104 * C2 *1DXY 9.8 DHD2_LACPA
6 PsiBlast_PDB 87.5233%-105 - C2 -1DXY 9.8 DHD2_LACPA
29 PsiBlast_CBE 86.1435%-109 - C2 -4PRL 7.7 ?
10 PsiBlast_PDB 85.1335%-109 - C2 -4PRL 8.3 ?
30 PsiBlast_CBE 63.6331% -94 - C2 -4U6S 6.5 CTBP1_HUMAN
33 PsiBlast_CBE 62.9931%-102 - C2 -3GA0 1.2 CTBP1_RAT
17 PsiBlast_PDB 61.9132% -90 - C2 -1HKU 7.0 CTBP1_RAT
20 PsiBlast_PDB 61.8731% -92 - C2 -1MX3 7.5 CTBP1_HUMAN
32 PsiBlast_CBE 61.3631% -91 - C2 -4LCE 3.8 CTBP1_HUMAN
31 PsiBlast_CBE 61.0031% -94 - C2 -4U6Q 7.4 CTBP1_HUMAN
19 PsiBlast_PDB 59.0832% -91 - C2 -2HU2 7.9 CTBP1_RAT
85 Fugue 36.2030% -74 - C2 -1DXY Error ?