@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0863: (2015-12-19 )
MEKFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPRVALKSAYFQGVCDEMIVAQNIEFYSTCEHHLLPFFGNISVGYIPKEKIVGISAIAKLIEIYSKRLQIQERLTTQIAETFDEIIEPRGVIVVCEAKHLCMSMQGVQKQNAIIKTSVLRGLFKKDPKTRAEFMQLLKS

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

8DG_D_13(1WUR)
?
[Raw transfer]



8GT_C_13(1WUQ)
?
[Raw transfer]



8GT_C_12(1WUQ)
?
[Raw transfer]



8DG_A_11(1WUR)
?
[Raw transfer]



8DG_A_11(1WUR)
?
[Raw transfer]



8DG_C_12(1WUR)
?
[Raw transfer]



8GT_D_14(1WUQ)
?
[Raw transfer]



8GT_A_11(1WUQ)
?
[Raw transfer]



8GT_A_15(1WUQ)
?
[Raw transfer]



8DG_A_15(1WUR)
?
[Raw transfer]



8DG_D_14(1WUR)
?
[Raw transfer]



GTP_B_11(4DU6)
?
[Raw transfer]



GTP_E_24(4DU6)
?
[Raw transfer]



GTP_A_6(4DU6)
?
[Raw transfer]



GTP_D_20(4DU6)
?
[Raw transfer]



GTP_C_14(4DU6)
?
[Raw transfer]



IPA_D_14(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_B_12(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_B_11(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_D_13(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_B_11(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_A_15(1FB1)
GCH1_HUMAN
[Raw transfer]
59 PsiBlast_CBE 96.3546%-110 - C13 -1WUQ 3.9 ?
63 PsiBlast_CBE 95.9346%-107 - C13 -1WM9 - ? -
61 PsiBlast_CBE 95.7846%-109 - C13 -1WM9 - ? -
52 PsiBlast_CBE 95.5746%-111 - C13 -1WUR 3.9 ?
53 PsiBlast_CBE 95.5646%-110 - C13 -1WUR 3.9 ?
57 PsiBlast_CBE 95.5546%-108 - C13 -1WUQ 3.6 ?
56 PsiBlast_CBE 95.5146%-112 - C13 -1WUQ 4.9 ?
55 PsiBlast_CBE 95.2746%-108 - C13 -1WUR 3.8 ?
60 PsiBlast_CBE 95.2146%-110 - C13 -1WM9 - ? -
62 PsiBlast_CBE 95.1546%-110 - C13 -1WM9 - ? -
54 PsiBlast_CBE 94.9446%-108 - C13 -1WUR 4.1 ?
6 PsiBlast_PDB 94.7846%-110 - C13 -1WUQ 3.9 ?
5 PsiBlast_PDB 94.7446%-109 - C13 -1WM9 - ? -
7 PsiBlast_PDB 94.6546%-106 - C13 -1WUR 4.1 ?
58 PsiBlast_CBE 94.2846%-109 - C13 -1WUQ 3.6 ?
3 PsiBlast_PDB 93.8046%-113 - C13 -1WPL - GCH1_RAT -
177 HHSearch 93.1946%-104 - C13 -1WUR 4.1 ?
49 PsiBlast_CBE 92.7945%-105 - C13 -1FB1 3.4 GCH1_HUMAN
1 PsiBlast_PDB 92.6846%-103 - C13 -1IS7 - GCH1_RAT -
47 PsiBlast_CBE 91.6546%-102 - C13 -1IS7 - GCH1_RAT -
4 PsiBlast_PDB 90.8745% -99 - C13 -1FB1 3.8 GCH1_HUMAN
48 PsiBlast_CBE 90.8245%-103 - C13 -1FB1 3.5 GCH1_HUMAN
50 PsiBlast_CBE 90.1545%-104 - C13 -1FB1 3.6 GCH1_HUMAN
51 PsiBlast_CBE 90.0945%-104 - C13 -1FB1 3.4 GCH1_HUMAN
166 Fugue 89.2443%-102 - C13 -1FB1 3.8 GCH1_HUMAN
64 PsiBlast_CBE 80.9331%-112 - C13 -4DU6 4.2 ?
66 PsiBlast_CBE 80.2331%-112 - C13 -4DU6 3.2 ?
9 PsiBlast_PDB 79.4931%-115 - C13 -4DU6 3.6 ?
65 PsiBlast_CBE 78.9131%-111 - C13 -4DU6 4.1 ?
67 PsiBlast_CBE 78.5731%-114 - C13 -4DU6 4.3 ?