@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1354: (2015-12-23 )
MKKTILLSALLAFSCAHALSDMDLIKKAKESQLEPMPMGKALKEYQIKKTRDVGIGAKNSEIMTSAQVELGKMLYFDPRISTSYLVSCNTCHNLGLGGVDLIPSAIGSQWKKNPHLLSSPTVYNSVFNDVQFWDGRVTHLNEQAQGPIQSSFEMGADPKVVVEKINSIPGYVKLFRKAYGSKVKIDFKLIADSIAMFEATLITPSRYDDFLRGNPKALSKAEKEGLDLFISKGCVACHNGINLGGTMQPFGVVKPYKFANVGDFKGDKNGLVKVPTLRNITETMPYFHNGQFWDVKDAIKEMGSIQLGIEISDAEAKKIETFFEALKGKKPKIIYPELPVMTDKTPKPSF

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEC_A_4(4AAL)
?
[Raw transfer]



HEC_B_22(4AAL)
?
[Raw transfer]



HEM_B_7(3HQ6)
?
[Raw transfer]



HEM_A_4(3HQ6)
?
[Raw transfer]



HEC_B_13(4AAO)
?
[Raw transfer]



HEC_A_4(4AAO)
?
[Raw transfer]



HEM_B_12(3HQ9)
?
[Raw transfer]



HEM_B_8(3HQ8)
?
[Raw transfer]



HEM_A_13(1IQC)
CCPR_NITEU
[Raw transfer]



HEC_A_3(4AAM)
?
[Raw transfer]



HEM_A_3(1NML)
?
[Raw transfer]



HEM_A_6(3O5C)
?
[Raw transfer]



HEM_A_3(1NML)
?
[Raw transfer]



HEM_A_3(1RZ6)
?
[Raw transfer]



HEM_A_3(3HQ7)
?
[Raw transfer]



CIT_A_4(1NML)
?
[Raw transfer]



CIT_A_4(1RZ6)
?
[Raw transfer]
27 PsiBlast_CBE 91.5544% -52 - C5 -2C1V - ? -
12 PsiBlast_PDB 91.4444% -51 - C5 -2C1V - ? -
51 HHSearch 91.1346% -44 - C5 -2VHD - CCPR_PSEAE -
2 PsiBlast_PDB 90.6246% -55 - C5 -3HQ6 9.5 ?
38 Fugue 90.4944% -55 - C5 -1EB7 - CCPR_PSEAE -
22 PsiBlast_CBE 90.3545% -59 - C5 -3HQ9 11.0 ?
39 Fugue 90.2644% -51 - C5 -1EB7 - CCPR_PSEAE -
8 PsiBlast_PDB 90.1746% -65 - C5 -1RZ5 - ? -
21 PsiBlast_CBE 89.8846% -56 - C5 -3HQ6 9.5 ?
28 PsiBlast_CBE 89.8744% -53 - C5 -3O5C - ? -
54 HHSearch 89.8645% -53 - C5 -3O5C 11.8 ?
49 HHSearch 89.8047% -60 - C5 -1NML 11.2 ?
13 PsiBlast_PDB 89.8044% -52 - C5 -3O5C - ? -
7 PsiBlast_PDB 89.7846% -62 - C5 -1NML 11.2 ?
9 PsiBlast_PDB 89.7446% -61 - C5 -1RZ6 10.9 ?
29 PsiBlast_CBE 89.3644% -53 - C5 -3O5C - ? -
3 PsiBlast_PDB 89.1749% -71 - C5 -4AAO 11.2 ?
23 PsiBlast_CBE 88.9949% -69 - C5 -4AAO 11.8 ?
30 PsiBlast_CBE 88.9144% -52 - C5 -3O5C - ? -
5 PsiBlast_PDB 88.8349% -52 - C5 -4AAM 11.0 ?
24 PsiBlast_CBE 88.6149% -58 - C5 -4AAL 10.9 ?
4 PsiBlast_PDB 87.8949% -58 - C5 -4AAL 11.3 ?
1 PsiBlast_PDB 87.7846% -58 - C5 -3HQ7 9.2 ?
25 PsiBlast_CBE 87.3745% -58 - C5 -3HQ8 10.1 ?
53 HHSearch 86.7543% -52 - C5 -1IQC 11.5 CCPR_NITEU