@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1975: (2016-03-30 )
MDTSRKIIHIDMDAFYASVEQRDHPEFRGKPLIIGGDPNKRGVVATCSYEARKFGVHSAMPTRQAAKLCPNGIFIHGNMAHYVEVSNQIREIFSRYTDIIEPLSLDEAYLDVTENKKGMKSATMVAREIQQTIYQELGLTASAGVSFNKFIAKIASDFKKPAGITVVTPEEAEAFLEQIPVTKFYGVGKVTAEKLHRLGIETGADLKKWSEWDLIRELHKHGYHLYRHVRGRSNNIVNPHRDRKSVGKETTFEFNVLDSRVLEQSLMQFAKKVEERLIKLQKHGKTVVLKLRYSDFTTITKRLTLNEYTNDASQIYQAAALLLIESYTGQDSIRLIGLTVTNLKPVYFENLRLEGL

Atome Classification :

(84 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1FZ_B_9(4R8U)
?
[Raw transfer]



0KX_A_10(4IRC)
DPO4_ECOLI
[Raw transfer]



1FZ_A_7(4Q44)
DPO4_ECOLI
[Raw transfer]



DCP_A_7(1S0N)
DPO4_SULSO
[Raw transfer]



DCP_B_14(2XCP)
DPO4_SULSO
[Raw transfer]



DCP_A_9(4IRK)
DPO4_ECOLI
[Raw transfer]



XG4_F_7(4IR9)
DPO4_ECOLI
[Raw transfer]



DZ4_F_7(4IRD)
DPO4_ECOLI
[Raw transfer]



DCP_B_7(4IRK)
DPO4_ECOLI
[Raw transfer]



TTP_A_4(3OSN)
POLI_HUMAN
[Raw transfer]



DZ4_A_10(4IRD)
DPO4_ECOLI
[Raw transfer]



DCP_A_6(1S10)
DPO4_SULSO
[Raw transfer]



DCP_A_4(4QW8)
DPO4_SULSO
[Raw transfer]



0KX_F_7(4IRC)
DPO4_ECOLI
[Raw transfer]



TTP_A_9(2OH2)
POLK_HUMAN
[Raw transfer]



TTP_B_14(2W9C)
DPO4_SULSO
[Raw transfer]



DTP_A_4(3MFI)
POLH_YEAST
[Raw transfer]



ATP_B_14(1RYS)
DPO4_SULSO
[Raw transfer]



DCP_C_12(4F4Y)
DPO4_SULAC
[Raw transfer]



DCP_A_7(4F4Y)
DPO4_SULAC
[Raw transfer]



ATP_A_6(1RYR)
DPO4_SULSO
[Raw transfer]



POP_A_10(2IBK)
DPO4_SULSO
[Raw transfer]



DCT_A_9(2V9W)
DPO4_SULSO
[Raw transfer]



DGT_A_7(2W7O)
POLK_HUMAN
[Raw transfer]



TMP_A_11(2RDJ)
DPO4_SULSO
[Raw transfer]



ATP_A_13(1RYS)
DPO4_SULSO
[Raw transfer]



NACID_H_7(1S9F)
DPO4_SULSO
[Raw transfer]
-
NACID_H_7(1S97)
DPO4_SULSO
[Raw transfer]
-
NACID_H_6(4Q44)
DPO4_ECOLI
[Raw transfer]
-
GOL_A_22(3FDS)
DPO4_SULSO
[Raw transfer]



DTP_A_5(2C2D)
DPO4_SULSO
[Raw transfer]



NACID_E_5(4F4W)
DPO4_SULAC
[Raw transfer]
-
NACID_P_2(2V4Q)
DPO4_SULSO
[Raw transfer]
-
NACID_C_3(2IA6)
DPO4_SULSO
[Raw transfer]
-
NACID_C_3(2VA2)
DPO4_SULSO
[Raw transfer]
-
NACID_E_5(2VA2)
DPO4_SULSO
[Raw transfer]
-
NACID_G_5(1S9F)
DPO4_SULSO
[Raw transfer]
-
NACID_C_3(4TQS)
?
[Raw transfer]
-
NACID_P_1(2R8I)
DPO4_SULSO
[Raw transfer]
-
NACID_E_5(2IA6)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(2BQU)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(4F4X)
DPO4_SULAC
[Raw transfer]
-
NACID_P_5(4TQS)
DPO4_SULSO
[Raw transfer]
-
NACID_E_1(1S9F)
DPO4_SULSO
[Raw transfer]
-
NACID_C_3(4GC7)
DPO4_SULSO
[Raw transfer]
-
NACID_C_2(4QWD)
DPO4_SULSO
[Raw transfer]
-
NACID_P_1(2R8H)
DPO4_SULSO
[Raw transfer]
-
NACID_B_2(4QWB)
DPO4_SULSO
[Raw transfer]
-
NACID_G_3(4IR1)
DPO4_ECOLI
[Raw transfer]
-
NACID_C_2(4QWA)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(2BQR)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(2J6T)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(2J6U)
DPO4_SULSO
[Raw transfer]
-
NACID_E_3(1S0O)
DPO4_SULSO
[Raw transfer]
-
NACID_C_1(1S0O)
DPO4_SULSO
[Raw transfer]
-
NACID_P_1(2R8G)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(2C2R)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(2BR0)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(2C22)
DPO4_SULSO
[Raw transfer]
-
NACID_E_5(2V9W)
DPO4_SULSO
[Raw transfer]
-
NACID_C_1(1S0M)
DPO4_SULSO
[Raw transfer]
-
NACID_G_5(1S97)
DPO4_SULSO
[Raw transfer]
-
NACID_C_2(4QW9)
DPO4_SULSO
[Raw transfer]
-
NACID_P_5(2XCP)
DPO4_SULSO
[Raw transfer]
-
NACID_C_2(4QWE)
DPO4_SULSO
[Raw transfer]
-
NACID_E_1(1S97)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(2W9A)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(2JEG)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(2W8L)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(3M9M)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(2V4R)
DPO4_SULSO
[Raw transfer]
-
NACID_E_3(1S0M)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(2C28)
DPO4_SULSO
[Raw transfer]
-
NACID_P_2(2C2E)
DPO4_SULSO
[Raw transfer]
-
NACID_G_1(4IRC)
DPO4_ECOLI
[Raw transfer]
-
NACID_E_5(4GC7)
?
[Raw transfer]
-
NACID_B_5(4Q45)
DPO4_ECOLI
[Raw transfer]
-
NACID_F_3(1S97)
DPO4_SULSO
[Raw transfer]
-
EDO_A_16(3FDS)
DPO4_SULSO
[Raw transfer]



NACID_P_2(4GC6)
DPO4_SULSO
[Raw transfer]
-
NACID_G_5(4Q44)
DPO4_ECOLI
[Raw transfer]
-
CHAIN_W_4(4R8U)
DPO4_ECOLI
[Raw transfer]
-
NACID_B_5(4IR1)
DPO4_ECOLI
[Raw transfer]
-
NACID_F_5(4IRK)
DPO4_ECOLI
[Raw transfer]
-
NACID_B_3(4IRC)
DPO4_ECOLI
[Raw transfer]
-
CHAIN_C_5(4R8U)
?
[Raw transfer]
-
NACID_B_3(4IRD)
DPO4_ECOLI
[Raw transfer]
-
NACID_C_3(4RZR)
?
[Raw transfer]
-
NACID_F_6(4RZR)
?
[Raw transfer]
-
NACID_G_3(4Q45)
DPO4_ECOLI
[Raw transfer]
-
NACID_C_4(4Q43)
DPO4_ECOLI
[Raw transfer]
-
NACID_C_4(4Q44)
DPO4_ECOLI
[Raw transfer]
-
NACID_B_2(4IR9)
DPO4_ECOLI
[Raw transfer]
-
NACID_G_1(4IRD)
DPO4_ECOLI
[Raw transfer]
-
NACID_G_5(4Q43)
DPO4_ECOLI
[Raw transfer]
-
8 PsiBlast_PDB 94.4845% -92 - C3 -4Q44 4.7 DPO4_ECOLI
9 PsiBlast_PDB 94.4145% -91 - C3 -4Q45 6.0 DPO4_ECOLI
26 PsiBlast_CBE 94.3245% -93 - C3 -4IRK 6.4 DPO4_ECOLI
25 PsiBlast_CBE 93.6945% -91 - C3 -4Q44 6.8 DPO4_ECOLI
29 PsiBlast_CBE 93.6745% -96 - C3 -4R8U 7.0 ?
7 PsiBlast_PDB 93.6045% -91 - C3 -4IRK 3.2 DPO4_ECOLI
4 PsiBlast_PDB 93.6045% -93 - C3 -4R8U 4.0 DPO4_ECOLI
21 PsiBlast_CBE 93.5845% -86 - C3 -4Q43 5.5 DPO4_ECOLI
27 PsiBlast_CBE 93.4545% -92 - C3 -4IRD 6.5 DPO4_ECOLI
3 PsiBlast_PDB 93.2945% -90 - C3 -4Q43 2.4 DPO4_ECOLI
28 PsiBlast_CBE 93.2045% -90 - C3 -4IRC 7.4 DPO4_ECOLI
5 PsiBlast_PDB 93.1545% -87 - C3 -4IRC 8.4 DPO4_ECOLI
22 PsiBlast_CBE 93.0545% -92 - C3 -4IR9 5.2 DPO4_ECOLI
24 PsiBlast_CBE 92.9845% -90 - C3 -4Q45 8.7 DPO4_ECOLI
1 PsiBlast_PDB 92.9845% -89 - C3 -4IR1 4.1 DPO4_ECOLI
23 PsiBlast_CBE 92.7045% -90 - C3 -4IR1 8.0 DPO4_ECOLI
6 PsiBlast_PDB 92.5745% -87 - C3 -4IRD 4.8 DPO4_ECOLI
2 PsiBlast_PDB 92.5445% -89 - C3 -4IR9 4.5 DPO4_ECOLI
102 Fugue 83.9632% -85 - C3 -2OH2 4.9 POLK_HUMAN
104 Fugue 82.6632% -84 - C3 -2W7O 4.4 POLK_HUMAN
13 PsiBlast_PDB 79.4434% -97 - C3 -4QWB 3.4 DPO4_SULSO
98 PsiBlast_CBE 79.0334% -96 - C3 -1RYS 4.9 DPO4_SULSO
18 PsiBlast_PDB 78.9434% -97 - C3 -4QWA 3.8 DPO4_SULSO
85 PsiBlast_CBE 78.8734% -99 - C3 -1S9F 3.4 DPO4_SULSO
72 PsiBlast_CBE 78.8734% -95 - C3 -2IBK 4.8 DPO4_SULSO
91 PsiBlast_CBE 78.7534% -94 - C3 -1S97 3.3 DPO4_SULSO
33 PsiBlast_CBE 78.6834% -93 - C3 -4TQS 3.2 ?
70 PsiBlast_CBE 78.5534% -93 - C3 -2J6T 3.0 DPO4_SULSO
94 PsiBlast_CBE 78.5334% -95 - C3 -1S0O 3.7 DPO4_SULSO
19 PsiBlast_PDB 78.4834% -94 - C3 -4QWD 3.8 DPO4_SULSO
73 PsiBlast_CBE 78.4734% -94 - C3 -2IA6 4.2 DPO4_SULSO
96 PsiBlast_CBE 78.3634% -96 * C3 *1S0M 3.9 DPO4_SULSO
50 PsiBlast_CBE 78.3634% -95 - C3 -2W9A 4.4 DPO4_SULSO
35 PsiBlast_CBE 78.3634% -96 - C3 -4RZR 4.2 ?
17 PsiBlast_PDB 78.3434% -95 - C3 -4QW9 4.3 DPO4_SULSO
36 PsiBlast_CBE 78.3234% -97 - C3 -4RZR 4.5 ?
37 PsiBlast_CBE 78.2634% -94 - C3 -4GC7 4.5 ?
93 PsiBlast_CBE 78.2434% -97 - C3 -1S0O 3.7 DPO4_SULSO
88 PsiBlast_CBE 78.2234% -89 - C3 -1S97 4.1 DPO4_SULSO
74 PsiBlast_CBE 78.2234% -98 - C3 -2IA6 3.5 DPO4_SULSO
81 PsiBlast_CBE 78.1634% -94 - C3 -2BQU 3.7 DPO4_SULSO
100 PsiBlast_CBE 78.1034% -96 - C3 -1RYR 5.2 DPO4_SULSO
92 PsiBlast_CBE 78.1034% -94 - C3 -1S10 6.1 DPO4_SULSO
16 PsiBlast_PDB 78.0634%-100 - C3 -4QW8 3.9 DPO4_SULSO
62 PsiBlast_CBE 77.9934% -94 - C3 -2R8I 2.6 DPO4_SULSO
78 PsiBlast_CBE 77.9734% -95 - C3 -2C28 3.7 DPO4_SULSO
80 PsiBlast_CBE 77.9434% -93 - C3 -2BR0 3.3 DPO4_SULSO
99 PsiBlast_CBE 77.9034% -95 - C3 -1RYS 4.5 DPO4_SULSO
58 PsiBlast_CBE 77.9034% -93 - C3 -2V4R 2.9 DPO4_SULSO
67 PsiBlast_CBE 77.8434% -93 - C3 -2JEG 3.0 DPO4_SULSO
89 PsiBlast_CBE 77.7634% -92 - C3 -1S97 3.8 DPO4_SULSO
84 PsiBlast_CBE 77.7034% -97 - C3 -1S9F 4.7 DPO4_SULSO
69 PsiBlast_CBE 77.6934% -93 - C3 -2J6U 3.4 DPO4_SULSO
97 PsiBlast_CBE 77.6634% -97 - C3 -1S0M 3.5 DPO4_SULSO
61 PsiBlast_CBE 77.5634% -96 - C3 -2RDJ 3.3 DPO4_SULSO
87 PsiBlast_CBE 77.4734% -94 - C3 -1S9F 3.0 DPO4_SULSO
39 PsiBlast_CBE 77.4634% -97 - C3 -4GC6 2.8 DPO4_SULSO
82 PsiBlast_CBE 77.3634% -95 - C3 -2BQR 3.0 DPO4_SULSO
64 PsiBlast_CBE 77.3534% -92 - C3 -2R8G 2.9 DPO4_SULSO
20 PsiBlast_PDB 77.3234% -96 - C3 -4QWE 3.6 DPO4_SULSO
95 PsiBlast_CBE 77.2934% -93 - C3 -1S0N 4.9 DPO4_SULSO
79 PsiBlast_CBE 77.2534% -91 - C3 -2C22 3.0 DPO4_SULSO
54 PsiBlast_CBE 77.2434% -90 - C3 -2VA2 4.4 DPO4_SULSO
77 PsiBlast_CBE 77.1734% -95 - C3 -2C2D 5.0 DPO4_SULSO
59 PsiBlast_CBE 77.1734% -93 - C3 -2V4Q Error DPO4_SULSO
76 PsiBlast_CBE 76.9734% -93 - C3 -2C2E 3.4 DPO4_SULSO
90 PsiBlast_CBE 76.9634% -98 - C3 -1S97 2.9 DPO4_SULSO
63 PsiBlast_CBE 76.8734% -96 - C3 -2R8H 2.9 DPO4_SULSO
34 PsiBlast_CBE 76.8234% -96 - C3 -4TQS 3.5 DPO4_SULSO
45 PsiBlast_CBE 76.6434% -93 - C3 -2XCP 4.3 DPO4_SULSO
75 PsiBlast_CBE 76.5534% -92 - C3 -2C2R 4.0 DPO4_SULSO
43 PsiBlast_CBE 76.5034% -98 - C3 -3FDS 2.8 DPO4_SULSO
38 PsiBlast_CBE 76.4934% -93 - C3 -4GC7 3.8 DPO4_SULSO
55 PsiBlast_CBE 76.4034% -93 - C3 -2VA2 3.6 DPO4_SULSO
42 PsiBlast_CBE 76.3534% -92 - C3 -3M9M 3.8 DPO4_SULSO
51 PsiBlast_CBE 76.2534% -90 - C3 -2W8L 5.2 DPO4_SULSO
56 PsiBlast_CBE 76.1534% -92 - C3 -2V9W 4.8 DPO4_SULSO
44 PsiBlast_CBE 75.9734% -94 - C3 -2XCP 4.2 DPO4_SULSO
48 PsiBlast_CBE 75.9634% -90 - C3 -2W9C 4.6 DPO4_SULSO
57 PsiBlast_CBE 75.9134% -87 - C3 -2V9W 3.6 DPO4_SULSO
31 PsiBlast_CBE 75.1035% -86 - C3 -4F4W 3.4 DPO4_SULAC (first)
12 PsiBlast_PDB 75.0035% -92 - C3 -4F4X 2.8 DPO4_SULAC (first)
11 PsiBlast_PDB 74.2535% -95 - C3 -4F4Y 3.0 DPO4_SULAC (first)
30 PsiBlast_CBE 72.6035% -93 - C3 -4F4Y 3.0 DPO4_SULAC (first)