@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2385: (2016-04-03 )
MGLQETIGIEIVSVEKGKAVVQLEVTEKVHQPFGYLHGGVSVVLAEHAASIGAAKSIEPDEIVFGLEINANHLASKQAGLVTATAEAIHIGKSTQVWEIKITDETEKLLCISRCTIAVKKKRK

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0FQ_D_9(4QD8)
Y1618_PSEAE
[Raw transfer]



0FQ_C_7(4QD8)
Y1618_PSEAE
[Raw transfer]



COA_A_5(4M20)
?
[Raw transfer]



0FQ_C_8(4QD8)
Y1618_PSEAE
[Raw transfer]



31B_F_8(4QD9)
Y1618_PSEAE
[Raw transfer]



31B_D_7(4QD9)
Y1618_PSEAE
[Raw transfer]



0FQ_B_6(4K4A)
MENI_ECOLI
[Raw transfer]



0FQ_D_10(4QD8)
Y1618_PSEAE
[Raw transfer]



COA_A_5(3LBE)
?
[Raw transfer]



0FQ_C_7(4K4C)
ENTH_ECOLI
[Raw transfer]



HFQ_D_7(4K49)
MENI_ECOLI
[Raw transfer]



PEG_A_5(3LZ7)
Y1161_HAEIN
[Raw transfer]
21 PsiBlast_CBE 95.9750%-110 - C1 -4M20 2.2 ?
23 PsiBlast_CBE 93.8050%-111 - C1 -4M20 - ? -
1 PsiBlast_PDB 92.8050%-108 - C1 -4M20 - ? -
22 PsiBlast_CBE 91.8050%-106 - C1 -4M20 - ? -
24 PsiBlast_CBE 87.7540%-116 - C1 -4QD9 2.6 Y1618_PSEAE
27 PsiBlast_CBE 87.7440%-116 - C1 -4QD9 - Y1618_PSEAE -
5 PsiBlast_PDB 87.6740%-113 - C1 -4QDB - Y1618_PSEAE -
25 PsiBlast_CBE 87.2640%-113 - C1 -4QD9 - Y1618_PSEAE -
31 PsiBlast_CBE 87.0840%-116 - C1 -4QD8 3.2 Y1618_PSEAE
29 PsiBlast_CBE 87.0440%-114 - C1 -4QD8 2.3 Y1618_PSEAE
28 PsiBlast_CBE 86.9140%-115 - C1 -4QD8 2.9 Y1618_PSEAE
2 PsiBlast_PDB 86.7940%-116 - C1 -4QD8 - Y1618_PSEAE -
3 PsiBlast_PDB 86.4540%-118 - C1 -4QD9 - Y1618_PSEAE -
30 PsiBlast_CBE 86.3940%-112 - C1 -4QD8 3.0 Y1618_PSEAE
4 PsiBlast_PDB 86.2940%-110 - C1 -4QDA - Y1618_PSEAE -
26 PsiBlast_CBE 84.5940%-115 - C1 -4QD9 2.9 Y1618_PSEAE
6 PsiBlast_PDB 84.2044%-118 - C1 -2B6E - Y1161_HAEIN -
65 HHSearch 82.6937%-106 * C1 *1VH5 - MENI_ECOLI -
7 PsiBlast_PDB 82.4644%-118 - C1 -3LZ7 2.2 Y1161_HAEIN
69 HHSearch 80.4628%-102 - C1 -1Q4T - 4HBT_ARTSP -
49 PsiBlast_CBE 71.5535% -96 - C1 -4K4C 2.3 ENTH_ECOLI
10 PsiBlast_PDB 70.8445%-111 - C1 -4K49 2.8 MENI_ECOLI
41 PsiBlast_CBE 69.7145%-114 - C1 -4K4A 2.5 MENI_ECOLI