@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0663: (2015-12-02 )
MSYLTFKHVDFKTDDKLVLNDINFAIDEGDFVSIVGPSGSGKSTVLKLASGLMSPTAGHIFFDGKDLNQLEPIESRKMISYCFQTPHLFGNTVEDNISFPYHIRHEKVDYRRVDDLFQRFEMDQSYLKQDVKKLSGGEKQRIALIRQLLFEPKVLLLDEVTSALDNHNKAIVEKVIKSLHDKGITILWITHDEEQSRRFANKVLKVVNGSIEAMEVIK

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]
30 PsiBlast_CBE 83.1334%-109 - C1 -3PUX - MALK_ECOLI -
36 PsiBlast_CBE 82.9534%-112 - C1 -2AWN - MALK_ECOLI -
32 PsiBlast_CBE 82.6234%-108 - C1 -3PUW - MALK_ECOLI -
28 PsiBlast_CBE 81.8734%-115 - C1 -3PUZ - MALK_ECOLI -
16 PsiBlast_PDB 81.8234%-112 - C1 -3PUY - MALK_ECOLI -
33 PsiBlast_CBE 81.2334%-110 - C1 -3PUV - MALK_ECOLI -
27 PsiBlast_CBE 80.8334%-112 - C1 -3RLF - MALK_ECOLI -
25 PsiBlast_CBE 80.6834%-109 - C1 -4KI0 - ? -
29 PsiBlast_CBE 80.2234%-109 - C1 -3PUY - MALK_ECOLI -
121 HHSearch 80.2033%-108 - C1 -3RLF - MALK_ECOLI -
35 PsiBlast_CBE 80.0434%-105 - C1 -2AWO - MALK_ECOLI -
26 PsiBlast_CBE 79.8634%-110 - C1 -3RLF - MALK_ECOLI -
119 HHSearch 79.7631%-102 - C1 -2YYZ - ? -
24 PsiBlast_CBE 79.7634%-107 - C1 -4KI0 - ? -
19 PsiBlast_PDB 79.7334%-110 - C1 -3PUV - MALK_ECOLI -
31 PsiBlast_CBE 79.6134%-109 - C1 -3PUX - MALK_ECOLI -
126 HHSearch 78.9336%-100 - C1 -3ZDQ - ABCBA_HUMAN -
41 PsiBlast_CBE 77.9333%-108 - C1 -2R6G - MALK_ECOLI (first) -
18 PsiBlast_PDB 77.5234%-112 - C1 -3PV0 - MALK_ECOLI -
40 PsiBlast_CBE 77.3433%-112 - C1 -2R6G - MALK_ECOLI (first) -
98 PsiBlast_CBE 64.7636% -89 - C1 -2OLK 4.3 ?
100 PsiBlast_CBE 63.7336% -87 - C1 -2OLK 4.3 ?
99 PsiBlast_CBE 63.3536% -89 - C1 -2OLK 4.8 ?
101 PsiBlast_CBE 62.7936% -90 * C1 *2OLK 4.1 ?
90 PsiBlast_CBE 62.1336% -87 - C1 -3C4J 3.7 ?
89 PsiBlast_CBE 61.8236% -84 - C1 -3C41 5.1 ?
102 PsiBlast_CBE 61.1836% -88 - C1 -2OLJ 4.0 ?
93 PsiBlast_CBE 60.3036% -82 - C1 -2Q0H 3.5 ?
91 PsiBlast_CBE 60.2836% -83 - C1 -3C4J 5.0 ?
70 PsiBlast_CBE 57.3834% -90 - C1 -4YMU 4.6 ?
88 PsiBlast_CBE 57.2836% -84 - C1 -3C41 4.2 ?
69 PsiBlast_CBE 56.0734% -88 - C1 -4YMU 5.1 ?
67 PsiBlast_CBE 55.8434% -91 - C1 -4YMV 5.0 ?
68 PsiBlast_CBE 54.8134% -87 - C1 -4YMV 4.0 ?