@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1023: (2015-12-04 )
MTQPILQVSDLSVYYNKKKALKEVSMDFYPNEITALIGPSGSGKSTLLRAINRMGDLNPEVTLTGAVMYNGHNVYSPRTDTVELRKEIGMVFQQPNPFPMSVFENVVYGLRLKGIKDKATLDEAVETSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIARTLATKPKIILLDEPTSALDPISAGKIEETLHGLKDQYTMLLVTRSMQQASRISDRTGFFLDGNLIEYGNTKEMFMNPKHKETEDYITGKFG

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]
1 PsiBlast_PDB 94.5439% -95 - C1 -4U00 - ? -
23 PsiBlast_CBE 92.8239% -90 - C1 -4U02 - ? -
2 PsiBlast_PDB 92.4939% -91 - C1 -4U02 - ? -
22 PsiBlast_CBE 91.7639% -90 - C1 -4U02 - ? -
21 PsiBlast_CBE 91.2239% -89 - C1 -4U02 - ? -
3 PsiBlast_PDB 88.3336% -81 - C1 -2OLJ 6.6 ?
116 HHSearch 88.0036% -86 - C1 -1B0U - HISP_SALTY -
24 PsiBlast_CBE 87.9836% -84 - C1 -3C4J 5.5 ?
30 PsiBlast_CBE 87.9136% -77 - C1 -2OLK 6.2 ?
29 PsiBlast_CBE 87.9036% -79 - C1 -2OLK 6.1 ?
4 PsiBlast_PDB 87.6736% -79 - C1 -2OLK 6.1 ?
5 PsiBlast_PDB 87.4336% -79 - C1 -2OUK - ? -
27 PsiBlast_CBE 87.0736% -78 - C1 -2OUK - ? -
28 PsiBlast_CBE 86.8136% -80 - C1 -2OUK - ? -
33 PsiBlast_CBE 86.6736% -77 - C1 -3C41 6.6 ?
32 PsiBlast_CBE 86.6036% -80 - C1 -2OLJ 5.8 ?
8 PsiBlast_PDB 86.3436% -74 - C1 -3C41 7.4 ?
31 PsiBlast_CBE 86.2536% -79 - C1 -2OLK 6.1 ?
7 PsiBlast_PDB 86.2136% -78 - C1 -3C4J 6.7 ?
47 PsiBlast_CBE 86.1933% -86 - C1 -1B0U 5.7 HISP_SALTY
6 PsiBlast_PDB 85.9236% -74 - C1 -2Q0H 5.6 ?
25 PsiBlast_CBE 85.5936% -80 - C1 -2Q0H 5.9 ?
11 PsiBlast_PDB 79.5734% -77 - C1 -4YMU 5.7 ?
12 PsiBlast_PDB 79.1034% -76 - C1 -4YMV 5.3 ?
34 PsiBlast_CBE 78.5434% -75 - C1 -4YMV 5.1 ?
35 PsiBlast_CBE 78.2034% -75 - C1 -4YMU 5.8 ?
73 PsiBlast_CBE 67.0736% -79 - C1 -1L2T 5.1 Y796_METJA
74 PsiBlast_CBE 66.2336% -77 - C1 -1L2T 4.4 Y796_METJA
75 PsiBlast_CBE 66.2136% -80 - C1 -3TIF 4.5 Y796_METJA
76 PsiBlast_CBE 65.5736% -75 - C1 -3TIF 4.3 Y796_METJA
54 PsiBlast_CBE 57.0532% -67 - C1 -4AYW 4.5 ABCBA_HUMAN
51 PsiBlast_CBE 56.0232% -60 - C1 -4AYX 4.1 ABCBA_HUMAN
52 PsiBlast_CBE 55.9132% -64 - C1 -4AYT 5.2 ABCBA_HUMAN