@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs2084: (2015-12-13 )
MAKIVVALGGNALGNSPEEQLRLVKHTAKSLVALIKKGHEIVVSHGNGPQVGAINLGMNFAAESGQGTNFPFPECGAMSQGYIGYHLQQSLLNELRQEGINKEVATIITQIEVDESDQAFSAPTKPIGTFYDKETSEKIAIEKGYTFVEDAGRGYRRVVASPEPKKIIEINSIKTLIENDTLVIAGGGGGIPVINKGGYEGIAAVIDKDKSSALLAGELAADQLIILTAVDYVYTQFGKENQKALTEVNENQMIDYVNQGEFAKGSMLPKVIACMSFLDHNPKGTALITSLNGLEDALDGKLGTRITK

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(4JZ7)
?
[Raw transfer]



ANP_B_6(4JZ7)
?
[Raw transfer]



ANP_D_8(4JZ7)
?
[Raw transfer]



ADP_C_9(2WE5)
ARCC1_ENTFA
[Raw transfer]



ADP_A_4(2WE5)
ARCC1_ENTFA
[Raw transfer]



ADP_B_5(1E19)
CPKA_PYRFU
[Raw transfer]



ADP_A_4(2WE5)
ARCC1_ENTFA
[Raw transfer]



ADP_A_3(1E19)
CPKA_PYRFU
[Raw transfer]



ANP_C_7(4JZ7)
?
[Raw transfer]



ADP_B_7(2WE5)
ARCC1_ENTFA
[Raw transfer]



ADP_A_3(1E19)
CPKA_PYRFU
[Raw transfer]



GOL_B_5(3KZF)
?
[Raw transfer]



GOL_D_6(3KZF)
?
[Raw transfer]



GOL_C_7(3KZF)
?
[Raw transfer]



CIT_D_8(4JZ8)
?
[Raw transfer]



CIT_B_8(4OLC)
?
[Raw transfer]



CIT_B_6(4JZ8)
?
[Raw transfer]



CIT_A_5(4JZ8)
?
[Raw transfer]



CIT_C_7(4JZ8)
?
[Raw transfer]



CIT_A_5(4OLC)
?
[Raw transfer]



CIT_D_11(4OLC)
?
[Raw transfer]



CIT_A_5(4JZ9)
?
[Raw transfer]



CIT_D_8(4JZ9)
?
[Raw transfer]



CIT_B_6(4JZ9)
?
[Raw transfer]



CIT_C_9(4OLC)
?
[Raw transfer]



CIT_C_7(4JZ9)
?
[Raw transfer]
1 PsiBlast_PDB 89.8846% -93 - C6 -1E19 6.7 CPKA_PYRFU
19 PsiBlast_CBE 89.8546% -93 - C6 -1E19 6.9 CPKA_PYRFU
4 PsiBlast_PDB 89.7248% -85 - C6 -2WE5 6.7 ARCC1_ENTFA
21 PsiBlast_CBE 88.6448% -87 - C6 -2WE5 6.6 ARCC1_ENTFA
20 PsiBlast_CBE 88.4948% -85 - C6 -2WE5 6.6 ARCC1_ENTFA
23 PsiBlast_CBE 88.3148% -83 - C6 -2WE4 - ARCC1_ENTFA -
24 PsiBlast_CBE 88.1648% -83 - C6 -2WE4 - ARCC1_ENTFA -
3 PsiBlast_PDB 87.7248% -80 - C6 -2WE4 - ARCC1_ENTFA -
22 PsiBlast_CBE 87.5048% -81 - C6 -2WE4 - ARCC1_ENTFA -
9 PsiBlast_PDB 86.1838% -87 - C6 -2E9Y - ? -
46 Fugue 85.8646% -80 - C6 -1B7B - ARCC1_ENTFC -
27 PsiBlast_CBE 85.7748% -77 - C6 -1B7B - ARCC1_ENTFC -
26 PsiBlast_CBE 85.7548% -79 - C6 -1B7B - ARCC1_ENTFC -
25 PsiBlast_CBE 85.5348% -78 - C6 -1B7B - ARCC1_ENTFC -
55 HHSearch 85.3444% -89 - C6 -1E19 4.8 CPKA_PYRFU
45 Fugue 85.2546% -83 - C6 -1B7B - ARCC1_ENTFC -
2 PsiBlast_PDB 84.9248% -80 - C6 -1B7B - ARCC1_ENTFC -
38 PsiBlast_CBE 84.7342% -92 - C6 -4JZ7 5.8 ?
37 PsiBlast_CBE 84.3742% -92 - C6 -4JZ7 5.5 ?
35 PsiBlast_CBE 84.0942% -88 - C6 -4JZ8 3.3 ?
33 PsiBlast_CBE 84.0342% -82 - C6 -4JZ9 3.2 ?
42 PsiBlast_CBE 84.0042% -90 - C6 -3KZF 3.0 ?
32 PsiBlast_CBE 83.8842% -89 - C6 -4JZ9 3.6 ?
8 PsiBlast_PDB 83.8842% -88 - C6 -4OLC 3.0 ?
7 PsiBlast_PDB 83.7642% -86 - C6 -4JZ9 3.1 ?
41 PsiBlast_CBE 83.5642% -91 - C6 -3KZF 2.8 ?
28 PsiBlast_CBE 83.5542% -90 - C6 -4OLC 2.9 ?
40 PsiBlast_CBE 83.4542% -90 - C6 -3KZF 2.1 ?
30 PsiBlast_CBE 83.2042% -86 - C6 -4OLC 3.0 ?
31 PsiBlast_CBE 83.0942% -85 - C6 -4JZ9 3.3 ?
5 PsiBlast_PDB 83.0542% -98 - C6 -4JZ7 6.3 ?
29 PsiBlast_CBE 83.0442% -89 - C6 -4OLC 3.6 ?
6 PsiBlast_PDB 83.0242% -87 - C6 -4JZ8 2.7 ?
36 PsiBlast_CBE 82.9842% -88 - C6 -4JZ8 4.0 ?
39 PsiBlast_CBE 82.5242% -91 - C6 -4JZ7 6.2 ?
34 PsiBlast_CBE 82.4542% -85 - C6 -4JZ8 3.5 ?
54 HHSearch 78.5543% -78 - C6 -2WE5 6.7 ARCC1_ENTFA