@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0490: (2016-04-23 )
MTVFSALLLAGVLSALALAVGGAVGMRLTSRVVEQRQRVATEWSGITVSQMLQCIVTLMPLGAAVVDTHRDVVYLNERAKELGLVRDRQLDDQAWRAARQALGGEDVEFDLSPRKRSATGRSGLSVHGHARLLSEEDRRFAVVFVHDQSDYARMEAARRDFVANVSHELKTPVGAMALLAEALLASADDSETVRRFAEKVLIEANRLGDMVAELIELSRLQGAERLPNMTDVDVDTIVSEAISRHKVAADNADIEVRTDAPSNLRVLGDQTLLVTALANLVSNAIAYSPRGSLVSISRRRRGANIEIAVTDRGIGIAPEDQERVFERFFRGDKARSRATGGSGLGLAIVKHVAANHDGTIRVWSKPGTGSTFTLALPALIEAYHDDERPEQAREPELRSNRSQREEELSR

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(4BIW)
CPXA_ECOLI
[Raw transfer]



ATP_A_3(4CB0)
CPXA_ECOLI
[Raw transfer]



ANP_B_7(4BIW)
CPXA_ECOLI
[Raw transfer]



ADP_A_7(3DGE)
?
[Raw transfer]



AN2_B_4(4U7O)
?
[Raw transfer]



ATP_A_3(4BIV)
CPXA_ECOLI
[Raw transfer]



ADP_A_8(4JAV)
?
[Raw transfer]



AN2_A_3(4U7O)
?
[Raw transfer]



ATP_A_4(3SL2)

[Raw transfer]



AN2_A_3(4U7O)
?
[Raw transfer]



ATP_A_4(3SL2)

[Raw transfer]



ADP_A_3(4JAS)
?
[Raw transfer]



ADP_A_5(4BIY)
CPXA_ECOLI
[Raw transfer]



ADP_B_8(3DGE)
?
[Raw transfer]



ADP_C_8(4BIY)
CPXA_ECOLI
[Raw transfer]



ADP_B_13(4JAV)
?
[Raw transfer]



ADP_A_2(2C2A)
?
[Raw transfer]



ADP_A_2(4JAU)
?
[Raw transfer]



ADP_A_3(4BIX)
CPXA_ECOLI
[Raw transfer]



ADP_A_3(4BIX)
CPXA_ECOLI
[Raw transfer]
6 PsiBlast_PDB 84.3731% -91 - C2 -4JAV 8.5 ?
53 HHSearch 82.6434% -84 - C2 -4U7O 9.0 ?
23 PsiBlast_CBE 81.8431% -84 - C2 -3DGE 7.8 ?
22 PsiBlast_CBE 81.7031% -90 - C2 -4JAV 7.6 ?
5 PsiBlast_PDB 81.5331% -86 - C2 -3DGE 7.1 ?
2 PsiBlast_PDB 80.2235% -79 - C2 -4U7O 9.0 ?
7 PsiBlast_PDB 80.1030% -85 - C2 -4JAS 8.5 ?
4 PsiBlast_PDB 79.7831% -96 - C2 -2C2A 7.2 ?
8 PsiBlast_PDB 79.5630% -98 - C2 -4JAU 6.4 ?
1 PsiBlast_PDB 75.2335% -90 - C2 -4U7N - ? -
10 PsiBlast_PDB 73.6431% -79 - C2 -4BIW 8.2 CPXA_ECOLI
21 PsiBlast_CBE 73.0535% -70 - C2 -4U7O 9.3 ?
26 PsiBlast_CBE 71.7131% -83 - C2 -4BIU - CPXA_ECOLI -
15 PsiBlast_PDB 70.5630% -80 - C2 -4BIV 6.0 CPXA_ECOLI
9 PsiBlast_PDB 70.5031% -90 - C2 -4BIU - CPXA_ECOLI -
11 PsiBlast_PDB 70.1831% -91 - C2 -4BIX 5.9 CPXA_ECOLI
55 HHSearch 70.0930% -87 - C2 -4BIX 5.9 CPXA_ECOLI
25 PsiBlast_CBE 70.0831% -89 - C2 -4BIU - CPXA_ECOLI -
51 HHSearch 69.8120% -68 - C2 -4GCZ - FIXL_BRADU (first) -
14 PsiBlast_PDB 69.7830% -76 - C2 -4Q20 - DIVL_CAUCR -
12 PsiBlast_PDB 68.6931% -88 - C2 -4BIY 6.5 CPXA_ECOLI
32 PsiBlast_CBE 68.3831% -81 - C2 -4BIW 8.1 CPXA_ECOLI
16 PsiBlast_PDB 68.2430% -79 - C2 -4CB0 7.4 CPXA_ECOLI
29 PsiBlast_CBE 66.3431% -84 - C2 -4BIY 6.9 CPXA_ECOLI
72 HHSearch 58.6539% -83 - C2 -3SL2 7.8
17 PsiBlast_PDB 44.7944% -71 - C2 -3SL2 7.8