@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2217: (2016-05-08 )
MTGSIRSKLSAIDVRQLGTVDYRTAWQLQRELADARVAGGADTLLLLEHPAVYTAGRRTETHERPIDGTPVVDTDRGGKITWHGPGQLVGYPIIGLAEPLDVVNYVRRLEESLIQVCADLGLHAGRVDGRSGVWLPGRPARKVAAIGVRVSRATTLHGFALNCDCDLAAFTAIVPCGISDAAVTSLSAELGRTVTVDEVRATVAAAVCAALDGVLPVGDRVPSHAVPSPL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DKA_A_2(1W66)
LIPB_MYCTU
[Raw transfer]




DKA_A_2(1W66)
LIPB_MYCTU
[Raw transfer]




DKA_A_2(1W66)
LIPB_MYCTU
[Raw transfer]




OCA_A_2(2QHS)
LIPB_THET8
[Raw transfer]




OCA_A_2(2QHS)
LIPB_THET8
[Raw transfer]




OYA_A_2(2QHU)
LIPB_THET8
[Raw transfer]




OC9_A_2(2QHV)
LIPB_THET8
[Raw transfer]




38 Fugue 99.7899%-118 - C2 -1W66 1.9 LIPB_MYCTU
21 HHSearch 99.3599%-119 - C2 -1W66 1.9 LIPB_MYCTU
1 PsiBlast_PDB 99.3199%-118 - C2 -1W66 1.9 LIPB_MYCTU
4 PsiBlast_PDB 78.4942%-100 - C2 -2QHV 3.4 LIPB_THET8
3 PsiBlast_PDB 78.3342%-101 - C2 -2QHU 3.2 LIPB_THET8
2 PsiBlast_PDB 78.3242%-100 - C2 -2QHT - LIPB_THET8 -
5 PsiBlast_PDB 78.1742%-101 - C2 -2QHS 3.6 LIPB_THET8
22 HHSearch 77.8641%-103 - C2 -2QHS 3.6 LIPB_THET8
28 HHSearch 65.8921% -98 - C2 -1VQZ - ? -
27 HHSearch 63.6717%-102 - C2 -2E5A - LIPT_BOVIN -
23 HHSearch 63.2516%-100 - C2 -2C8M - LPLAN_THEAC -
26 HHSearch 62.3217%-109 * C2 *3A7R - LPLA_ECOLI -
47 Fugue 56.9020% -94 - C2 -1BIA - ? -
30 HHSearch 47.0917%-120 - C2 -2EAY - ? -
31 HHSearch 46.7217%-109 - C2 -4XTV - ? -
33 HHSearch 43.6114%-107 - C2 -2EJ9 - BPL_METJA -
32 HHSearch 42.0812%-111 - C2 -3BFM - ? -
29 HHSearch 42.0317%-109 - C2 -2DXU - ? -
25 HHSearch 41.2715% -43 - C2 -2P5I - LIPL_BACHD -
41 Fugue 38.9314% -24 - C2 -1X2G - LPLA_ECOLI -