@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3257c: (2016-05-18 )
MSWPAAAVDRVIKAYDVRGLVGEEIDESLVTDLGAAFARLMRTEDARPVVIGHDMRDSSPSLADAFAAGVTGQGLDVVRVGLASTDQLYFASGLLDCPGAMFTASHNPAAYNGIKMCRAAAKPVGADTGLTAIRDDLIAGVARYDGTPGTIADQDVLVDYGAFLRSLVDTSGLRPLRVAVDAGNGMAGHTAPAVLGVIDSITLLPSYFELDGSFPNHEANPLDPANLVDLQAYVRDTGADIGLAFDGDADRCFVVDERGQPVSPSTVTALVAARELNREIGATIIHNVITSRAVPELVAERGGTPLRSRVGHSYIKALMAETGAIFGGEHSAHYYFRDFWGADSGMLAALHVLAALGEQSRPLSELTADYQRYESSGEINFTVVDSSACVEAVLKSFGNRIVSIDHLDGVTVDLGDDSWFNLRSSNTEPLLRLNVEGRSVGDVDAVVRQVSAEIAAQSAHAKAGP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G16_X_2(2FKM)
ALGC_PSEAE
[Raw transfer]



G1P_X_2(1P5D)
ALGC_PSEAE
[Raw transfer]



G1P_X_2(1P5D)
ALGC_PSEAE
[Raw transfer]



G6P_X_2(1P5G)
ALGC_PSEAE
[Raw transfer]



M1P_X_2(1PCJ)
ALGC_PSEAE
[Raw transfer]



X1P_X_3(2H5A)
ALGC_PSEAE
[Raw transfer]



R1P_X_2(2H4L)
ALGC_PSEAE
[Raw transfer]



G1P_X_2(3BKQ)
ALGC_PSEAE
[Raw transfer]



M6P_X_3(1PCM)
ALGC_PSEAE
[Raw transfer]



G16_A_2(2FKF)
ALGC_PSEAE
[Raw transfer]



TLA_A_3(4MRQ)
ALGC_PSEAE
[Raw transfer]



TLA_X_3(1K2Y)
ALGC_PSEAE
[Raw transfer]



TLA_X_3(1K2Y)
ALGC_PSEAE
[Raw transfer]



EDO_A_14(4MRQ)
ALGC_PSEAE
[Raw transfer]
43 Fugue 97.4332% -81 - C1 -1K2Y 3.2 ALGC_PSEAE
14 PsiBlast_PDB 95.6935% -87 - C1 -1K35 - ALGC_PSEAE -
1 PsiBlast_PDB 95.1435% -84 - C1 -4MRQ 3.0 ALGC_PSEAE
3 PsiBlast_PDB 94.8635% -83 - C1 -2FKM 5.2 ALGC_PSEAE
13 PsiBlast_PDB 94.8535% -85 - C1 -4IL8 - ALGC_PSEAE -
10 PsiBlast_PDB 94.7635% -84 - C1 -1PCM 4.7 ALGC_PSEAE
4 PsiBlast_PDB 94.4535% -83 - C1 -2FKF 4.2 ALGC_PSEAE
2 PsiBlast_PDB 94.3835% -82 - C1 -1K2Y 3.2 ALGC_PSEAE
12 PsiBlast_PDB 94.3135% -87 - C1 -3C04 - ALGC_PSEAE -
11 PsiBlast_PDB 94.0135% -85 - C1 -3BKQ 4.7 ALGC_PSEAE
9 PsiBlast_PDB 93.6735% -82 - C1 -1PCJ 5.0 ALGC_PSEAE
5 PsiBlast_PDB 93.6635% -82 - C1 -2H4L 4.5 ALGC_PSEAE
6 PsiBlast_PDB 93.6435% -82 - C1 -2H5A 5.6 ALGC_PSEAE
8 PsiBlast_PDB 93.4635% -82 - C1 -1P5G 5.6 ALGC_PSEAE
7 PsiBlast_PDB 93.0835% -82 - C1 -1P5D 6.3 ALGC_PSEAE
27 HHSearch 92.6232% -80 - C1 -1P5D 6.4 ALGC_PSEAE
24 HHSearch 91.0232% -84 - C1 -3UW2 - ? -
15 PsiBlast_PDB 89.0835% -75 - C1 -3UW2 - ? -
17 PsiBlast_PDB 88.4727% -85 - C1 -3PDK - GLMM_BACAN -
22 HHSearch 86.4626% -84 - C1 -3PDK - GLMM_BACAN -