@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1122: (2016-01-26 )
MIREILKMGDERLLRIAQPVPSELFGSEELQRLIDDMFETMHHVGGVGLAAPQIGVDLQLVIFGFERSERYPDAPAVPPTILLNPRVTPLDDEMEEGWEGCLSVPGLRGAVSRHRRIRYQGLDPQDSRSTAASKGSMRGWCSTSATT

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EPE_B_6(1VEY)
DEF_LEPIN
[Raw transfer]




EPE_A_5(1VEY)
DEF_LEPIN
[Raw transfer]




MES_B_6(1VEV)
DEF_LEPIN
[Raw transfer]




MES_A_5(1VEV)
DEF_LEPIN
[Raw transfer]




FMT_A_11(1VEZ)
DEF_LEPIN
[Raw transfer]




FMT_A_13(1Y6H)
DEF_LEPIN
[Raw transfer]




FMT_A_13(1Y6H)
DEF_LEPIN
[Raw transfer]




FMT_B_17(1VEZ)
DEF_LEPIN
[Raw transfer]




FMT_A_3(1XEO)
DEF_ECOLI
[Raw transfer]




GLY_B_5(1Y6H)
DEF_LEPIN
[Raw transfer]




6 PsiBlast_PDB 87.7648%-108 - C6 -1VEZ 3.1 DEF_LEPIN
1 PsiBlast_PDB 87.7662%-124 - C6 -3DLD - ? -
7 PsiBlast_PDB 87.5848%-103 - C6 -1SZZ - DEF_LEPIN -
23 PsiBlast_CBE 87.5148%-104 - C6 -1VEY 3.0 DEF_LEPIN
5 PsiBlast_PDB 87.4048% -98 - C6 -1VEY 2.7 DEF_LEPIN
22 PsiBlast_CBE 87.1848%-107 - C6 -1VEZ 3.3 DEF_LEPIN
29 PsiBlast_CBE 86.7648%-101 - C6 -1SZZ - DEF_LEPIN -
3 PsiBlast_PDB 86.7348% -97 - C6 -1SV2 - DEF_LEPIN -
32 PsiBlast_CBE 86.5148% -99 - C6 -1SZZ - DEF_LEPIN -
31 PsiBlast_CBE 86.4948% -99 - C6 -1SZZ - DEF_LEPIN -
25 PsiBlast_CBE 86.4748% -98 - C6 -1SV2 - DEF_LEPIN -
21 PsiBlast_CBE 86.3148%-105 - C6 -1Y6H 3.0 DEF_LEPIN
28 PsiBlast_CBE 86.0248% -99 - C6 -1SZZ - DEF_LEPIN -
4 PsiBlast_PDB 85.9248%-107 - C6 -1VEV 2.3 DEF_LEPIN
24 PsiBlast_CBE 85.6648%-105 - C6 -1VEV 3.0 DEF_LEPIN
27 PsiBlast_CBE 85.5248%-100 - C6 -1SZZ - DEF_LEPIN -
30 PsiBlast_CBE 85.3648%-101 - C6 -1SZZ - DEF_LEPIN -
101 HHSearch 85.3145% -97 - C6 -1Y6H 3.3 DEF_LEPIN
26 PsiBlast_CBE 85.1648% -96 - C6 -1SZZ - DEF_LEPIN -
2 PsiBlast_PDB 83.9648%-105 - C6 -1Y6H 3.4 DEF_LEPIN
105 HHSearch 68.7230% -90 - C6 -1XEO 3.3 DEF_ECOLI