@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1869: (2016-02-02 )
MDDIETRVRKLVAARFGVEECDIRLDSDFRNDFGAESLEVVELVMALEAEFGVEIADDDAERIETVRQAIDYLEEAVPT

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PM4_A_14(2FAC)
ACP_ECOLI
[Raw transfer]



PM5_A_12(2FAD)
ACP_ECOLI
[Raw transfer]



PM8_A_11(2FAE)
ACP_ECOLI
[Raw transfer]



PM4_B_15(2FAC)
ACP_ECOLI
[Raw transfer]



PM5_B_13(2FAD)
ACP_ECOLI
[Raw transfer]



PSR_A_11(1L0I)
ACP_ECOLI
[Raw transfer]



PSR_A_11(1L0I)
ACP_ECOLI
[Raw transfer]



IMD_A_16(1T8K)
ACP_ECOLI
[Raw transfer]



IMD_A_14(1T8K)
ACP_ECOLI
[Raw transfer]
3 PsiBlast_PDB 90.8151%-144 - C5 -2EHS - ACP_AQUAE -
63 HHSearch 90.6245%-123 * C5 *3GZM - ? -
36 PsiBlast_CBE 89.6449%-132 - C5 -4IHF - ? -
46 PsiBlast_CBE 89.4950%-143 - C5 -4KEH - ? -
8 PsiBlast_PDB 89.4549%-133 - C5 -4IHF - ? -
4 PsiBlast_PDB 89.2551%-135 - C5 -2EHT - ACP_AQUAE -
56 PsiBlast_CBE 89.1950%-139 - C5 -1T8K 3.9 ACP_ECOLI
14 PsiBlast_PDB 89.1349%-137 - C5 -1L0H - ACP_ECOLI -
25 PsiBlast_CBE 88.9849%-142 - C5 -4IHH - ? -
31 PsiBlast_CBE 88.9149%-142 - C5 -4IHG - ? -
33 PsiBlast_CBE 88.6149%-138 - C5 -4IHF - ? -
12 PsiBlast_PDB 88.5549%-127 - C5 -3EJD - ACP_ECOLI -
38 PsiBlast_CBE 88.5349%-123 - C5 -3EJE - ACP_ECOLI -
35 PsiBlast_CBE 88.5149%-136 - C5 -4IHF - ? -
29 PsiBlast_CBE 88.4749%-129 - C5 -4IHG - ? -
37 PsiBlast_CBE 88.1849%-125 - C5 -3EJE - ACP_ECOLI -
41 PsiBlast_CBE 87.9649%-126 - C5 -3EJD - ACP_ECOLI -
40 PsiBlast_CBE 87.9249%-131 - C5 -3EJD - ACP_ECOLI -
11 PsiBlast_PDB 87.9249%-129 - C5 -3EJB - ACP_ECOLI -
47 PsiBlast_CBE 87.7450%-137 - C5 -4KEH - ? -
65 HHSearch 87.6846%-116 - C5 -1L0I 3.1 ACP_ECOLI
52 PsiBlast_CBE 87.3550%-131 - C5 -2FAD 3.3 ACP_ECOLI
53 PsiBlast_CBE 87.2650%-126 - C5 -2FAD 4.3 ACP_ECOLI
54 PsiBlast_CBE 87.1850%-132 - C5 -2FAC 4.9 ACP_ECOLI
55 PsiBlast_CBE 87.1650%-130 - C5 -2FAC 5.4 ACP_ECOLI
17 PsiBlast_PDB 86.9147%-126 - C5 -1L0I 3.1 ACP_ECOLI
51 PsiBlast_CBE 84.3750%-135 - C5 -2FAE 4.2 ACP_ECOLI