@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2966: (2016-02-12 )
MSTIEERVKKIVAEQLGVKEEEVTNSASFVEDLGADSLDTVELVMALEEEFETEIPDEKAEKITTVQEAIDYIVAHQQ

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PSE_B_12(2FAE)
ACP_ECOLI
[Raw transfer]




PM4_B_15(2FAC)
ACP_ECOLI
[Raw transfer]




1R3_A_5(4KEH)
?
[Raw transfer]




1R3_B_6(4KEH)
?
[Raw transfer]




SXM_A_2(2X2B)
ACP_BACSU
[Raw transfer]




ZMK_B_6(4ETW)
ACP_SHIF8
[Raw transfer]




PM5_B_13(2FAD)
ACP_ECOLI
[Raw transfer]




PM8_A_11(2FAE)
ACP_ECOLI
[Raw transfer]




ZMK_D_5(4ETW)
ACP_SHIF8
[Raw transfer]




IMD_A_14(1T8K)
ACP_ECOLI
[Raw transfer]




IMD_A_16(1T8K)
ACP_ECOLI
[Raw transfer]




7 PsiBlast_PDB 96.9988%-123 - C4 -1L0H - ACP_ECOLI -
9 PsiBlast_PDB 96.3688%-118 - C4 -3NY7 - ? -
49 PsiBlast_CBE 96.1188%-112 - C4 -2FAC 4.8 ACP_ECOLI
48 PsiBlast_CBE 95.9988%-115 - C4 -2FAD 3.5 ACP_ECOLI
4 PsiBlast_PDB 95.6688%-127 - C4 -4IHF - ? -
11 PsiBlast_PDB 95.5088%-120 - C4 -1T8K 3.9 ACP_ECOLI
13 PsiBlast_PDB 95.2788%-112 - C4 -2FAD - ACP_ECOLI -
12 PsiBlast_PDB 94.9588%-116 - C4 -2FAC - ACP_ECOLI -
47 PsiBlast_CBE 94.6988%-108 - C4 -2FAE Error ACP_ECOLI
10 PsiBlast_PDB 94.3787%-121 - C4 -1L0I - ACP_ECOLI -
33 PsiBlast_CBE 94.2488%-122 - C4 -4IHH - ? -
37 PsiBlast_CBE 94.2288%-118 - C4 -4IHG - ? -
14 PsiBlast_PDB 94.1888%-117 - C4 -2FAE 3.8 ACP_ECOLI
25 PsiBlast_CBE 94.1388%-118 - C4 -3EJD - ACP_ECOLI -
45 PsiBlast_CBE 94.1288%-117 - C4 -4KEH 3.3 ?
16 PsiBlast_PDB 93.9588%-118 - C4 -4ETW 1.9 ACP_SHIF8
86 HHSearch 93.9486%-125 - C4 -1L0I - ACP_ECOLI -
41 PsiBlast_CBE 93.9488%-117 - C4 -4IHF - ? -
17 PsiBlast_PDB 93.8388%-112 - C4 -4KEH 3.4 ?
2 PsiBlast_PDB 93.6188%-119 - C4 -3EJD - ACP_ECOLI -
46 PsiBlast_CBE 93.3088%-116 - C4 -4ETW 2.0 ACP_SHIF8
52 PsiBlast_CBE 81.4259%-120 - C4 -2X2B 2.3 ACP_BACSU