@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4211: (2016-02-24 )
MPDTTNPIGFTDANELREKNRATVEKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNINIFGTDDPNHFWVECDGHGKILFPGYPEGYYENHFLHSFELEDGKIKRNREFMNVFQQLRALSIPVPQIKREGIPT

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_7(3FF0)
PHZB2_PSEAE
[Raw transfer]



GOL_A_7(3FF0)
PHZB2_PSEAE
[Raw transfer]



AOD_B_4(3JUM)
?
[Raw transfer]



AOD_A_3(3JUM)
?
[Raw transfer]



AOD_A_3(3JUM)
?
[Raw transfer]



AKD_A_3(3JUP)
?
[Raw transfer]



AKD_B_4(3JUP)
?
[Raw transfer]



3B4_B_5(3B4P)
?
[Raw transfer]



AKD_B_6(3JUQ)
?
[Raw transfer]



AJD_A_3(3JUN)
?
[Raw transfer]



AJD_B_4(3JUO)
?
[Raw transfer]



AJD_A_3(3JUQ)
?
[Raw transfer]



AJD_A_3(3JUO)
?
[Raw transfer]



AJD_B_5(3JUN)
?
[Raw transfer]



HHA_A_6(3CNM)
?
[Raw transfer]



HHA_B_7(3CNM)
?
[Raw transfer]



3OC_B_6(3DZL)
?
[Raw transfer]



3OC_A_4(3DZL)
?
[Raw transfer]
1 PsiBlast_PDB 96.3290% -76 - C1 -3FF0 2.6 PHZB2_PSEAE
25 HHSearch 94.5188% -76 - C1 -3FF0 2.6 PHZB2_PSEAE
22 PsiBlast_CBE 85.3863% -71 - C1 -3CNM 3.5 ?
9 PsiBlast_PDB 85.3863% -76 - C1 -3JUO 4.9 ?
4 PsiBlast_PDB 85.3663% -72 - C1 -3CNM 3.7 ?
17 PsiBlast_CBE 85.3363% -71 - C1 -3JUP 5.1 ?
5 PsiBlast_PDB 85.3163% -71 - C1 -3DZL 2.6 ?
7 PsiBlast_PDB 85.2363% -71 - C1 -3JUM 6.7 ?
20 PsiBlast_CBE 85.1163% -69 - C1 -3JUM 6.6 ?
3 PsiBlast_PDB 85.1063% -71 - C1 -3B4P - ? -
2 PsiBlast_PDB 85.0263% -69 - C1 -3B4O - ? -
18 PsiBlast_CBE 84.9663% -76 - C1 -3JUO 3.7 ?
10 PsiBlast_PDB 84.9363% -69 - C1 -3JUP 4.9 ?
11 PsiBlast_PDB 84.9263% -71 - C1 -3JUQ 4.8 ?
21 PsiBlast_CBE 84.7963% -68 - C1 -3DZL 2.6 ?
23 PsiBlast_CBE 84.6063% -72 - C1 -3B4P 5.5 ?
24 PsiBlast_CBE 84.5263% -70 - C1 -3B4O - ? -
8 PsiBlast_PDB 84.2463% -73 - C1 -3JUN 5.1 ?
26 HHSearch 83.7761% -69 - C1 -3JUM 6.7 ?
16 PsiBlast_CBE 83.6863% -72 - C1 -3JUQ 4.3 ?
19 PsiBlast_CBE 82.9563% -74 - C1 -3JUN 5.0 ?