@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4506: (2016-02-28 )
METVLTARDLTRHYEVSRGLFKGHAQVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLIEEPTSGSLKIAGQEVKGASKDQRRQLRRDVQMVFQNPYASLNPRQKIGDQLAEPLLINTALSREERREKVQQMMRQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTSALDVSIQAQVLNLFMDLQQQFRTAYVFISHNLAVVRHVADDVLVMYLGRPAEMGPADKLYENPLHPYTRALLSATPAIHPDPTKPKIRIQGELPNPLNPPEGCAFHKRCPYATERCRSEVPELRLLDQRQVACHHAEQFLG

Atome Classification :

(60 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_H_8(2FGK)

[Raw transfer]



ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ATP_H_8(2FGJ)

[Raw transfer]



ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]



ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]



ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ATP_D_12(1XEF)

[Raw transfer]



ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]



ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]



ADP_A_3(1JJ7)

[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



ADP_B_2(2FFA)

[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_A_2(3NHB)

[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



ADP_B_2(2FFB)

[Raw transfer]



ADP_B_2(2FF7)

[Raw transfer]



ADP_A_3(3NHA)

[Raw transfer]



12D_A_2(3B5J)

[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



ATP_A_2(3NH9)

[Raw transfer]



ADP_A_2(5DGX)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]
1 PsiBlast_PDB 93.2735% -98 - C1 -4FWI - ? -
123 Fugue 84.2528% -95 - C1 -3TUZ - METN_ECOLI -
118 HHSearch 81.9632%-103 - C1 -1B0U 5.7 HISP_SALTY
4 PsiBlast_PDB 81.5333% -95 - C1 -3TUZ - METN_ECOLI -
3 PsiBlast_PDB 81.2433% -92 - C1 -3TUI - METN_ECOLI -
21 PsiBlast_CBE 81.0233% -96 - C1 -3TUZ - METN_ECOLI -
22 PsiBlast_CBE 80.5033% -94 - C1 -3TUZ - METN_ECOLI -
23 PsiBlast_CBE 80.4633% -92 - C1 -3TUZ - METN_ECOLI -
25 PsiBlast_CBE 80.1033% -94 - C1 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 79.8733% -85 - C1 -3TUI - METN_ECOLI -
24 PsiBlast_CBE 79.8633% -95 - C1 -3TUI - METN_ECOLI -
103 HHSearch 78.6232%-102 - C1 -3TUI - METN_ECOLI -
2 PsiBlast_PDB 78.4534% -92 - C1 -3DHW - METN_ECOLI -
20 PsiBlast_PDB 78.2831%-102 - C1 -1B0U 6.0 HISP_SALTY
119 HHSearch 77.2132% -95 * C1 *2OLJ 6.1 ?
35 PsiBlast_CBE 75.5733% -83 - C1 -2OLK 5.8 ?
33 PsiBlast_CBE 75.2833% -84 - C1 -2OUK - ? -
8 PsiBlast_PDB 75.2833% -85 - C1 -2OLJ - ? -
32 PsiBlast_CBE 75.0633% -84 - C1 -2OUK - ? -
34 PsiBlast_CBE 75.0433% -83 - C1 -2OUK - ? -
130 Fugue 74.6130% -93 - C1 -1B0U 5.8 HISP_SALTY
11 PsiBlast_PDB 74.6133% -83 - C1 -2Q0H 5.4 ?
12 PsiBlast_PDB 74.3133% -81 - C1 -3C4J 6.4 ?
6 PsiBlast_PDB 74.2234% -89 - C1 -4U00 5.9 ?
9 PsiBlast_PDB 73.8933% -86 - C1 -2OLK 5.6 ?
30 PsiBlast_CBE 73.6433% -88 - C1 -3C4J 4.9 ?
37 PsiBlast_CBE 73.1633% -83 - C1 -2OLK 5.7 ?
41 PsiBlast_CBE 72.6434% -83 - C1 -4YMU 5.9 ?
38 PsiBlast_CBE 72.4233% -83 - C1 -2OLJ 5.4 ?
31 PsiBlast_CBE 72.3533% -86 - C1 -2Q0H 5.6 ?
39 PsiBlast_CBE 71.7433% -78 - C1 -3C41 5.7 ?
13 PsiBlast_PDB 71.5433% -77 - C1 -3C41 6.7 ?
36 PsiBlast_CBE 71.4633% -84 - C1 -2OLK 5.8 ?
17 PsiBlast_PDB 70.8534% -80 - C1 -4YMV 5.4 ?
40 PsiBlast_CBE 69.8534% -80 - C1 -4YMV 4.7 ?
16 PsiBlast_PDB 69.7034% -80 - C1 -4YMU 5.9 ?
64 PsiBlast_CBE 61.4632% -80 - C1 -1JJ7 4.4
91 PsiBlast_CBE 58.3432% -91 - C1 -2FFA 5.0
74 PsiBlast_CBE 58.3432% -89 - C1 -2FFB 5.1
66 PsiBlast_CBE 58.2232% -94 - C1 -2PMK 5.1
67 PsiBlast_CBE 57.9232% -94 - C1 -2FF7 5.0
69 PsiBlast_CBE 57.7032% -93 - C1 -3B5J 5.2
89 PsiBlast_CBE 56.1032% -87 - C1 -2FGJ 6.0 HLYBP_ECOLX
93 PsiBlast_CBE 55.8232% -93 - C1 -1XEF 5.2 HLYBP_ECOLX
87 PsiBlast_CBE 55.5432% -91 - C1 -2FGJ 5.4
71 PsiBlast_CBE 55.5032% -86 - C1 -2FGK 5.4 HLYBP_ECOLX
72 PsiBlast_CBE 55.4632% -82 - C1 -2FGK 6.1 HLYBP_ECOLX
88 PsiBlast_CBE 55.1232% -84 - C1 -2FGJ 5.4 HLYBP_ECOLX
90 PsiBlast_CBE 55.1132% -88 - C1 -2FGJ 5.5 HLYBP_ECOLX
95 PsiBlast_CBE 54.8132% -90 - C1 -1XEF 4.6 HLYBP_ECOLX
70 PsiBlast_CBE 54.7932% -83 - C1 -2FGK 5.9
73 PsiBlast_CBE 54.7232% -86 - C1 -2FGK 6.1 HLYBP_ECOLX
92 PsiBlast_CBE 54.6332% -90 - C1 -1XEF 5.6
94 PsiBlast_CBE 53.6732% -91 - C1 -1XEF 5.9 HLYBP_ECOLX
65 PsiBlast_CBE 53.3831% -79 - C1 -5DGX 4.6 ?
96 PsiBlast_CBE 52.9731% -87 - C1 -3NHB 4.6
97 PsiBlast_CBE 52.6531% -85 - C1 -3NHA 4.6
62 PsiBlast_CBE 52.0032% -65 - C1 -3FVQ 7.2 FBPC_NEIG1
63 PsiBlast_CBE 50.5632% -65 - C1 -3FVQ 6.7 FBPC_NEIG1
98 PsiBlast_CBE 49.4631% -83 - C1 -3NH9 4.8