@TOME V3
(Feb 2022)
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : DsLIZ_107570T0_kcl60: (2019-03-29 )
YKCRISLMNGSDSTDDYADGKPGDTVNLEANNGDIVKVYIRDNCYYDILNKEKMPASYTIKT
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....-----....10.---..----.-----------....20--......-.-----..30..---......--40---.-..--.....50..---.----....-----.--60.
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y
K
C
R
I
-----
S
L
MNGSD---ST----D-----------DYADG---KPG
D
T
V
-
N
-----
L
EANNG---
D
I
V
K
V
Y
--IR---D-N
C
--
Y
Y
DILNKEK---M----PASY-----T--IKT
36
Fugue
67.30
20%
58
- C4 -
-
2JDQ
-
PB2_I75A3
D:
[688-756]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAVL
R
G
F
L
I
LGKED
R
R
Y
G
P
A
L
---
S
I
----
N
-----------
E
L
S
N
L
---
A
K
G
E
K
A
-
N
-----
V
L
I
G
Q
G
---
D
V
V
L
V
M
--
K
R
--------------
K
R
D
S
---
Q
----
T
A
T
K
-----
R
--
I
R
M
30
SP3
65.27
19%
179
- C6 -
-
1PWT
-
?
?:
[1-61]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
G
T
G
K
---
E
L
VLAL
Y
-----------
D
Y
Q
E
K
---
S
P
R
E
---------
V
T
M
K
K
G
---
D
I
L
T
L
L
NS
T
N
---
K
-
D
W
--
W
K
V
E
V
N
D
R
Q
GF-
V
----
P
A
A
Y
--------
V
K
K
42
Fugue
64.87
20%
24
- C5 -
-
4PIV
2
FAS_HUMAN
A:
[1-653]
MQVPILEKFCFTPHTEEGCLSERAALQEELQLCKGLVQALQTPSQQELPRLLSAACRLAQVLAQERPKLPEDPLLSGLLDSPALKACLDTAVENMPSLKMKVVEVLAGHGHLYSRIPGLLSPHPLLQLSYTATDRHPQALEAAQAELQQHDVAQGQWDPADPAPSALGSADLLVCNCAVAALGDPASALSNMVAALREGGFLLLHTLLRGHPLGDIVAFLTSQGILSQDAWESLFSRVSLRLVGLKKSFYGSTLFLCRRPTPQDSPIFLPVDDTSFRWVESLKGILADEDSARPVWLKAINCATSGVVGLVNCLRREPGG
N
R
L
R
C
-----
V
L
L
S
N
L
S
---
S
T
----
S
-----------
H
V
P
E
V
---
D
P
G
S
A
E
-
L
-----
Q
K
V
L
Q
G
---
D
L
V
M
N
V
--
Y
R
---
D
-
G
A
--
W
G
A
F
R
H
F
L
L
---
E
----
E
D
S
K
-----
T
--
F
C
P
28
SP3
64.81
19%
76
- C6 -
0.09
1J3T
-
A:
[1-74]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
S
---
G
S
----
S
GVENLKAQALC
S
W
T
A
K
---
K
D
N
H
---------
L
N
F
S
K
H
---
D
I
I
T
V
L
--
E
Q
---
Q
E
N
W
--
W
F
G
E
V
H
G
G
R
GW-
F
----
P
K
S
Y
VK---
I
--
I
P
G
26
SP3
62.86
20%
-12
- C6 -
0.05
1SPK
-
A:
[1-72]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
S
---
G
S
----
S
GQKVKTIF---
P
H
T
A
G
---
N
N
K
T
L
L
-
S
-----
F
A
Q
--
G
---
D
V
L
T
L
L
--
I
P
EEK
D
-
G
W
--
L
Y
G
E
H
D
T
T
K
---
A
RGWF
P
S
S
Y
-----
T
KL
L
S
G
46
Fugue
61.77
12%
61
- C4 -
-
2MYW
-
?
A:
[7-85]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGRENLYFQGHMAAPA
R
F
C
V
Y
-----
Y
D
G
H
L
P
A
---
T
R
----
V
-----------
L
L
M
Y
V
---
R
I
G
T
T
A
-
T
-----
I
T
A
R
G
H
---
E
F
E
V
E
A
--
K
D
---
Q
-
N
C
--
K
V
I
L
T
N
G
K
Q
---
A
----
P
D
W
L
-----
A
--
A
E
P
41
Fugue
60.66
15%
20
- C6 -
0.38
3E19
-
?
A:
[2-77]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMVVPLSEMGPG
D
K
G
I
V
-----
V
N
I
L
G
G
H
---
N
A
----
R
-----------
Q
K
L
V
S
MGL
T
P
G
A
T
I
-
Q
-----
V
L
E
S
M
G
------
P
I
I
--
I
S
---
V
-
G
G
--
V
R
F
A
I
G
K
G
L
---
A
----
G
R
V
M
-----
V
--
R
K
L
29
SP3
59.03
14%
88
- C6 -
-
1FMK
-
?
?:
[82-159]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
V
T
T
F
V
-----
A
L
Y
D
Y
E
S
---
R
T
----
E
-----------
T
D
L
S
F
---
K
K
G
E
R
L
-
Q
I----
V
N
N
T
E
G
---
D
W
W
L
A
H
--
S
L
---
S
-
T
--------
G
Q
T
G
---
Y
I---
P
S
N
Y
VAPSD
S
--
I
Q
A
34
SP3
58.97
17%
71
- C4 -
-
1BT0
3
A:
[1-73]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
I
K
V
-----
K
T
L
T
G
K
E
---
I
E
------------------
I
D
I
---
E
P
T
D
T
I
-
D
RIKER
V
E
E
K
E
G
IPP
V
Q
Q
R
L
I
--
Y
A
---
G
-
K
Q
------
L
A
D
D
K
---
T
----
A
K
D
Y
-----
N
--
I
E
G
33
SP3
58.33
17%
97
- C6 -
0.23
1CSK
-
CSK_HUMAN
A:
[11-68]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
T
E
CI-
A
K
----
Y
-----------
N
F
H
G
T
---
A
E
Q
D
---------
L
P
F
C
K
G
---
D
V
L
T
I
V
--
A
V
---
T
-
K
D
PN
W
Y
K
A
K
N
K
V
G
---
R
EGII
P
A
N
Y
--------
V
Q
K
1
PsiBlast_PDB
56.44
37%
-177
- C3 -
-
2VN6
-
?
A:
[19-47]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
N
G
---
K
P
G
D
T
V
-
T
-----
V
P
V
T
F
A
---
D
V
A
K
M
K
--
N
V
---
G
-
T
C
--
N
F
------------------------------
3
PsiBlast_PDB
56.20
37%
-195
- C3 -
-
1G1K
-
?
A:
[11-39]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
N
G
---
K
P
G
D
T
V
-
T
-----
V
P
V
T
F
A
---
D
V
A
K
M
K
--
N
V
---
G
-
T
C
--
N
F
------------------------------
47
Fugue
54.72
21%
41
- C6 -
-
1KCW
-
?
?:
[347-560]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRGKHVRHYYIAAEEIIWNYAPSGIDIFTKENLTAPGSDSAVFFEQGTTRIGGSYKKLVYRE
Y
T
D
A
S
-----
F
T
N
R
K
E
R
---
G
P
----
E
-----------
E
E
H
L
G
---
I
L
G
P
V
--------
I
W
A
E
V
G
---
D
T
I
R
V
T
--
F
H
--------------
N
K
G
A
---
Y
----
P
L
S
I
-----
E
--
P
I
G
2
PsiBlast_PDB
54.63
37%
-153
- C3 -
-
2VN5
-
?
A:
[19-47]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
N
G
---
K
P
G
D
T
V
-
T
-----
V
P
V
T
F
A
---
D
V
A
K
M
K
--
N
V
---
G
-
T
C
--
N
F
------------------------------
38
Fugue
54.18
26%
52
- C2 -
-
2KJE
-
B:
[1-42]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
H
M
A
P
E
D
---
P
N
----
E
-----------
E
A
V
S
Q
---
I
F
P
D
S
V
-
M
-----
L
A
V
Q
E
G
-----------------------
I
D
L
L
T
F
P
P
---
A
----
P
G
S
P
-----
E
-----
27
SP3
53.46
12%
-60
- C6 -
0.18
1W6X
-
NCF4_HUMAN
A:
[173-228]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
R
A
E
A
----------------
L
----
F
-----------
D
F
T
G
N
---
S
K
L
E
---------
L
N
F
K
A
G
---
D
V
I
F
L
L
--
S
R
IN-
K
-
D
W
--
L
E
G
T
V
R
G
A
T
GI-
F
----
P
L
S
F
-----
V
KI
L
K
-
35
Fugue
51.02
6%
-100
* C4 *
-
2MM2
-
?
A:
[1-65]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
T
A
-----
N
I
L
N
I
N
E
---
V
V
----
I
-----------
A
T
G
C
V
---
P
A
G
G
N
L
-
I
-----
I
R
V
G
S
D
---
H
S
Y
L
I
R
--
A
T
---
V
-
S
C
--
G
L
S
L
N
P
S
Q
S
---
F
----
I
N
G
E
-----
S
--
L
A
S
31
SP3
47.57
11%
135
- C6 -
0.18
1BBZ
-
ABL1_HUMAN
A:
[1-58]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
LFV
A
L
----
Y
-----------
D
F
V
A
S
---
G
D
N
T
---------
L
S
I
T
K
G
---
E
K
L
R
V
L
--
G
Y
NH-
N
-
G
E
--
W
C
E
A
Q
T
K
N
G
QGW
V
----
P
S
N
Y
IT---
P
--
V
N
S
25
SP3
46.49
11%
61
- C6 -
0.18
1JO8
-
A:
[1-58]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
W
A
T
-----
A
E
Y
D
Y
D
A
---
A
E
----
D
-----------
N
E
L
T
F
---
V
E
N
D
K
I
I
N
-----
I
E
F
V
D
D
---
D
W
W
L
G
E
--
L
E
---
K
-
D
--------
G
S
K
G
---
L
F---
P
S
N
Y
V----
S
--
L
G
N
45
Fugue
46.46
16%
63
- C4 -
-
4YMP
2
?
A:
[12-130]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V
F
D
A
V
I
-----
K
A
Y
K
D
N
S
---
D
E
----
E
-----------
S
Y
A
T
V
---
Y
I
K
D
P
K
-
L
-----
T
I
E
N
G
K
---
R
I
I
T
A
T
--
L
K
---
D
-
S
D
--
F
F
D
Y
L
K
V
E
F
---
H
----
D
V
K
V
-----
L
--
S
E
D