@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : M_BR29_EuGene_00041131: (2018-03-20 )
PHFCEVSVSYENANKQKITTATKYVVPPGSVDIAVGSQMYAVTVDETCKRTDSISIPGRFKIDTQGKKLEGNPTENYIRSVVLQLNHRGLRMVSRPAP
Atome Classification :
(20 SA)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10...-..---...20-----...-----------.-...----------.30....--.-...----------40...----------------------.-....50.-..-------.--------.-..-----.-60....-..---.---.---70.---.---------------------.-----.....--------80.......-.-90--...-..-...
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P
H
F
C
E
V
S
V
S
YENAN-K
Q
---
K
I
T
TA-----
T
K
Y
-----------V-VPP----------G
S
V
D
I
A
V--G-
S
Q
M
----------
Y
A
V
T
V
----------------------
D
-
E
TCKRTD-SI-------S--------I-P
G
-----
R
-
F
K
IDTQ-GK---K---L---EGN---
P
---------------------
T
-----
E
N
Y
I
R
--------
S
V
V
L
Q
LNHR-G-
L
---
R
MV-SR-PAP
30
Fugue
63.97
26%
21
- C5 -
-
2PJD
-
RSMC_ECOLI
A:
[3-335]
AFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMGDNARFSLVATADDVADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDAEKFWGEYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR
L
T
L
C
D
V
S
A
P
A
V
E
A
S
-
R
A
---
T
L
A
A
N
----------------------------------
G
V
E
G
E
V
F
--
A
-
S
N
V
----------
F
--------------------------
S
-
E
V
K
G
R
F
D
M
I
I
-------
S
--------
N
-
P
P
-----
F
-
H
D
-----
G
M
---
Q
---
T
---
S
L
D
---
A
---------------------
A
-----
Q
T
L
I
R
--------
G
A
V
R
H
L
N
S
G
-
G
E
L
---
R
I
V
-
A
N
-
A
F
L
38
SP3
59.30
9%
-66
- C6 -
-
1IHJ
-
INAD_DROME (first)
A:
[3-96]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
E
L
I
H
M
V
T
L
D
K
T
G
K
-
K
S
---
F
G
I
C
I
-----
V
R
G
-----------
E
-
V
K
D
----------
S
P
N
T
K
T
T
--
G
-
I
F
I
----------
K
G
I
V
P
----------------------
D
-
S
P
A
H
L
C
G
-
R
L
-------
K
----------
V
G
-----
D
-
R
I
L
S
L
N
-
G
K
---
D
---
V
---
R
N
S
-------------------------
T
-----
E
Q
A
V
I
--------
D
L
I
K
E
-
A
D
F
-
K
-
I
---
E
L
E
-
I
Q
-
T
F
-
45
SP3
57.73
19%
-28
* C4 *
-
1NPS
-
DESS_MYXXA
A:
[1-88]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
N
I
T
V
F
Y
-
N
E
D
-
F
-------
Q
G
-----
K
Q
V
-----------
D
-
L
P
P
----------
G
N
Y
T
-----
R
-
A
Q
L
----------
A
A
L
G
I
----------------------
E
-
N
--
N
T
I
S
-
S
V
-------
K
--------
V
-
P
P
-----
G
V
K
A
I
L
Y
Q
-
N
D
---
G
---
F
---
A
G
D
QIE
V
---------------------
V
-----
A
N
A
E
E
--------
L
G
P
L
N
N
N
V
S
-
S
-
I
---
R
V
I
-
S
V
-
P
V
-
37
Fugue
56.22
18%
22
- C4 -
-
2LVL
-
?
A:
[1-128]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
T
M
H
F
T
D
D
N
-
E
N
---
D
T
S
E
T
-----
M
E
S
-----------
L
-
I
D
K
----------
G
K
L
D
Q
V
V
Y-
D
-
D
Q
L
----------
Y
H
L
K
E
----------------------
K
V
D
E
D
K
K
G
K
-
V
I
-------
G
--------
A
-
I
G
Q----
T
-
F
F
V
D
G
D
-
G
K
---
R
---
W
---
S
E
E
---
E
LKEPYISNNPDEIREKKPLRY
G
-----
K
V
Y
S
T
NEDSDAKD
E
I
I
V
E
F
N
R
E
-
Y
-
Y
---
R
A
V
-
L
I
-
K
N
E
39
SP3
54.57
15%
67
- C6 -
-
1NF3
-
PAR6B_MOUSE
C:
[6-128]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVISMPQDFRPVSSIIDVDILP
E
T
H
R
R
V
R
L
C
K
Y
G
T
E
-
K
P
LGF
Y
I
R
D
G
-----
S
S
V
-----------
R
-
V
T
P
----------
H
G
L
E
K
V
P
--
G
-
I
F
I
----------
S
R
L
V
P
----------------------
G
-
G
L
A
Q
S
T
G
-
L
L
-------
A
----------
V
N
-----
D
-
E
V
L
E
V
N
-
G
I
---
E
---
V
---
S
G
K
-------------------------
S
-----
L
D
Q
V
T
--------
D
M
M
I
A
-
N
S
R
-
N
-
L
---
I
I
T
-
V
R
-
P
A
N
33
Fugue
53.71
23%
38
* C7 *
-
1F3U
-
T2FB_HUMAN
A:
[2-119]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
E
R
G
E
L
D
L
T
G
A
K
Q
N
T
G
V
---
W
L
V
K
V
-----
P
K
Y
-----------
L
-
S
Q
Q
WAKASGRGEV
G
K
L
R
I
A
K
TQ
G
-
R
T
E
----------
V
S
F
T
L
----------------------
N
-
E
D
L
A
N
I
H
-
D
I
GGKPASV
S
--------
A
-
P
R
-----
E
-
H
P
F
V
L
Q
-
S
V
---
G
--------
G
Q
---
T
---------------------
L
-----
T
V
F
T
E
--------
S
S
S
D
K
L
S
L
E
-
G
-
I
VVQ
R
A
E
-
C
R
-
P
A
-
32
Fugue
47.63
15%
5
- C4 -
-
1VM0
-
Y2416_ARATH
A:
[19-116]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
K
N
-
R
I
Q
V
S
N
T
K
K
P
-
L
F
---
F
Y
V
N
L
-----
A
K
R
-----------
Y
M
Q
Q
Y
----------
N
D
V
E
L
S
A
L-
G
M
A
I
A
----------
T
V
V
T
V
----------------------
T
-
E
I
L
K
N
N
-----------------------
G
-----
F
-
A
V
E
K
K
I
M
T
S
---
I
---
V
---
D
I
K
---
P
---------------------
V
-----
Q
K
A
K
I
--------
E
I
T
L
V
K
S
E
K
--------
F
D
-
E
L
M
A
A
A
21
HHSearch
45.95
24%
99
- C2 -
-
2FIN
-
?
A:
[141-229]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
C
E
V
S
I
D
I
R
C
S
E
-
E
E
---
K
-
D
S
D
-----
I
K
T
HPVLGSNISHK
K
-
V
S
Y
----------
E
D
---
I
I
--
G
-
S
T
I
VDTKCVKNLE
F
S
V
R
I
----------------------
G
-
D
M
C
K
E
S
S
-
E
L
-------
E
--------
V
-
K
D
-----
G
-
F
K
Y
-
V
D
-
G
S
---
A
---
S
---
K
G
A
---
T
---------------------
D
-----
D
--------------------------------------
47
SP3
45.70
13%
35
- C6 -
-
1MFG
-
A:
[1-95]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
M
E
I
R
V
R
V
E
K
D
P
-
E
L
---
G
F
S
I
S
GGVGG
R
G
N
-----------
P
-
F
R
P
----------
D
D
D
G
I
F
V
--
T
-
R
--------------
V
Q
P
----------------------
E
-
G
P
A
S
K
L
--------------------
L
Q
P
G
-----
D
-
K
I
I
Q
A
N
-
G
Y
---
S
---
F
---
I
N
I
-------------------------
E
-----
H
G
Q
A
V
--------
S
L
L
K
T
F
Q
N
T
-
V
-
E
---
L
I
I
-
V
R
-
E
V
S
44
SP3
44.92
10%
32
- C6 -
-
1T2M
-
A:
[1-93]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
K
E
P
E
I
I
T
V
T
L
K
K
Q
N
-
G
M
---
G
L
S
I
V
-----
A
A
K
-----------
G
-
A
G
Q
----------
D
K
L
G
I
Y
V
----
K
S
V
----------
V
K
-------------------------
G
-
G
A
A
D
V
D
G
-
R
L
-------
A
----------
A
G
-----
D
-
Q
L
L
S
V
D
-
G
R
---
S
---
L
---
V
G
L
-------------------------
S
-----
Q
E
R
A
A
--------
E
L
M
T
R
T
S
S
V
V
T
-
L
---
E
V
A
-
K
Q
-
G
A
-
35
Fugue
44.16
50%
-103
- C1 -
-
2HRP
-
?
P:
[1-10]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
-------
S
--------
L
-
P
G
-----
R
-
W
K
P
K
-----------------------------------------------------------------------------------------
43
SP3
43.99
13%
76
- C6 -
-
1D5G
-
A:
[1-96]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P
K
P
G
D
I
F
E
V
E
L
A
K
N
D
-
N
S
LGI
S
V
T
G
G
-----
V
N
T
-----------
S
-
V
R
H
----------
G
G
I
---------
Y
V
----------
K
A
V
I
P
----------------------
Q
-
G
A
A
E
S
D
G
-
R
I
-------
H
----------
K
G
-----
D
-
R
V
L
A
V
N
-
G
V
---
S
---
L
---
E
G
A
-------------------------
T
-----
H
K
Q
A
V
--------
E
T
L
R
N
T
G
Q
V
-
V
-
H
---
L
L
L
-
E
K
-
G
Q
S
41
SP3
43.38
16%
65
- C4 -
-
1WE8
-
A:
[1-104]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
S
G
S
S
G
I
L
-
T
E
---
N
T
P
V
F
-----
E
Q
L
-----------
S
-
V
P
Q
----------
R
S
V
G
R
I
I
--
G
-
R
G
------------
G
E
T
I
----------------------
R
-
S
I
C
K
A
S
G
A
K
I
-------
T
--------
C
-
D
K
-----
E
-
S
E
G
T
L
L
-
L
S
---
R
LIK
I
---
S
G
T
---
Q
---------------------
K
EVAAA
K
H
L
I
L
--------
E
K
V
S
E
D
E
E
L
-
R
-
K
---
R
I
A
H
S
A
-
S
G
P
36
Fugue
42.93
15%
57
- C7 -
-
2K78
1
ISDC_STAAW
A:
[22-146]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SANA
A
D
S
G
T
L
N
Y
E
V
Y
K
Y
N
-
T
N
---
D
T
S
I
A
-----
N
D
Y
-----------
F
-
N
K
P
----------
A
K
Y
I
K
K
N
--
G
-
K
L
Y
----------
V
Q
I
T
V
NHSHWITGMSIEGHKENIISKN
T
-
A
K
D
E
R
T
S
-
E
F
-------
E
--------
V
-
S
K
LNGKI
D
-
G
K
I
D
V
Y
-
I
D
---
E
---
K
---
V
N
G
---
K
---------------------
P
-----
F
K
Y
D
H
--------
H
Y
N
I
T
Y
K
F
N
-
G
-
P
---
T
D
V
-
A
-----
4
PsiBlast_PDB
42.59
31%
-89
- C3 -
-
4XJC
-
DCD_BACHD
A:
[18-60]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
I
T
P
L
-----
T
E
E
-----------
Q
-
I
Q
P
----------
A
S
V
D
L
R
L
--
G
-
P
H
F
------------
V
T
I
----------------------
D
-
D
S
K
E
A
V
I
-
S
F
-------
E
--------
R
-
P
I
-----
R
-
Y
R
-------------------------------------------------------------------------------------------
40
SP3
40.49
9%
97
- C6 -
-
1UHP
-
A:
[1-107]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGS
S
G
-
K
S
L
T
L
V
L
H
R
D
S
-
G
S
LGF
N
I
I
G
G
-----
R
P
S
-----------
V
-
D
N
H
----------
D
G
S
S
-
S
E
--
G
-
I
F
V
----------
S
K
I
V
D
----------------------
S
-
G
P
A
A
K
E
G
-
G
L
-------
Q
----------
I
H
-----
D
-
R
I
I
E
V
N
-
G
R
---
D
---
L
---
S
R
A
-------------------------
T
-----
H
D
Q
A
V
--------
E
A
F
K
T
A
K
E
P
-
I
-
V
---
V
Q
V
-
L
R
-
R
T
S
5
HHSearch
40.05
28%
-71
- C8 -
-
4ESN
-
?
A:
[62-93]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
P
----------------------
D
-
Q
L
C
V
H
Q
K
-
A
I
-------
S
RTGESIIC
L
-
P
N
-----
Q
-
V
V
V
S
V
Q
-
G
-------------------------------------------------------------------------------------
24
HHSearch
39.45
25%
8
- C- -
-
3ERW
-
STOA_BACSU
E:
[124-162]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
L
M
K
E
Y
H
-
I
I
-------
T
--------
I
-
P
T
-----
S
-
F
L
L
N
E
K
-
G
E
---
I
---
E
KTK
I
G
P
---
M
---------------------
T
-----
A
E
Q
L
K
--------
E
W
------------------------
19
HHSearch
39.35
24%
22
- C5 -
-
3C73
-
RESA_BACSU
B:
[91-135]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
V
L
D
A
Y
D
-
V
S
-------
P
--------
L
-
P
T
-----
T
-
F
L
I
N
P
E
-
G
K
VVK
V
---
V
---
T
G
T
---
M
---------------------
T
-----
E
S
M
I
H
--------
D
Y
M
N
L
I
K
P
------------------
23
HHSearch
39.20
25%
10
- C- -
-
3ERW
-
STOA_BACSU
F:
[124-162]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
L
M
K
E
Y
H
-
I
I
-------
T
--------
I
-
P
T
-----
S
-
F
L
L
N
E
K
-
G
E
---
I
---
E
KTK
I
G
P
---
M
---------------------
T
-----
A
E
Q
L
K
--------
E
W
------------------------