@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : M_TH16_EuGene_00000541: (2018-03-20 )
RPYHGRIQDLRRPLLCDVYIEYPSGQVFDQALGHDIVPAGETAEISGFKCKTVRGTCVILPTCDTPPEYRVTSWKFEREMSDPERTRFIARFPNVRI
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10.--..-...---..20.--....---..---.30..--...-.-..--40----.------...---..----..50--.-.-.-.....60-..--------.-.--------------.....70...----.....--80---.-----------.----.......----90----.-...-..
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPYHG
R
I
Q
D
L
RR--P
L
-
L
C
D
---
V
Y
I
EY--PS
G
Q
---
V
F
---
D
Q
A
LG--HDI-V-PA--GE----T------AEI---SG----
F
K
C
K
--T-V-R-
G
T
C
V
I
L
--PT--------C-D--------------TPPEY
R
V
T
S
W
----
K
F
ERE--M----S-----------
D
----
P
E
R
T
R
F
I
----
A
R----F-PNV-RI
21
Fugue
54.67
16%
-105
- C6 -
-
5JA9
1
HIGB2_VIBCH
C:
[2-109]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
S
V
F
V
E
S
T
I
F
E
K
--
Y
R
---
D
---
E
Y
L
S
D
--
E
E
Y
R
---
L
F
---
Q
A
E
L
M
--
L
N
P
-
K
-
L
G
--
D
V
----
I
------
Q
G
T
---
G
G
----
L
R
K
I
--
R
-
V
-
A
S
G
S
R
I
I
Y
--
Y
F
--------
L
-
D
--------------
E
K
R
R
F
Y
L
L
T
I
----
Y
G
K
N
E
--
M
----
S
-----------
D
LNA-
N
Q
R
K
Q
L
M
----
A
F
----
M
-
E
A
W
-
R
N
27
SP3
54.51
24%
59
- C9 -
-
1KO9
-
OGG1_HUMAN
A:
[12-135]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GH
R
T
L
A
S
T
-
P
A
L
W
A
--
S
I
-
P
C
P
RSE
L
R
L
D
L
VL
P
S
G
Q
---
S
F
RWR
E
Q
S
P
A
--
H
W
S
G
V
-
L
A
--
D
Q
VWTL
T
------
Q
T
E
---
E
Q
----
L
H
C
T
--
V
-
Y
-
R
-
G
D
K
S
-
Q
--
A
S
--------
R
-
P
--------------
T
P
D
E
L
E
A
V
R
K
----
Y
F
Q
L
D
--
V
----
T
LAQLYHHWGSV
D
----
S
H
F
Q
E
V
A
----
Q
K
----
F
-
Q
G
V
-
R
L
24
SP3
50.77
14%
-82
- C6 -
-
1H4R
-
MERL_HUMAN
A:
[21-104]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
T
F
T
V
R
I
V
T
M
D
A
--
E
M
-
E
F
N
---
C
E
M
K
W
--
K
G
K
D
---
L
F
---
D
L
V
C
R
--
T
---------
L
G
----
L
------
R
E
T
---
W
F
----
F
G
L
Q
--
Y
-
T
I
K
-
D
T
V
A
W
L
------------------------------
K
M
D
K
K
V
L
------
D
H
D
V
S
--
K
----
E
-----------
E
----
P
V
T
F
H
F
L
----
A
K
----
F
Y
P
E
----
30
SP3
49.63
19%
2
- C7 -
-
1GXT
1
HYPF_ECOLI
A:
[4-91]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
T
-
S
C
G
---
V
Q
L
R
I
---
R
G
K
---
V
-----
Q
G
V
G
FR
P
F
V
-
W
-
Q
L
--
A
Q
----
Q
------
L
N
L
---
H
G
----
D
V
C
N
--
D
-
G
-
D
-
G
V
E
V
R
L
RE
D
P
EVFLVQLY
Q
-
H
--------------
C
P
P
L
A
R
I
D
S
V
----
E
R
E
P
F
--
I
----
W
-----------
S
----
Q
L
P
T
E
F
T
----
I
R
------------
31
SP3
48.07
15%
21
* C7 *
-
1URR
1
ACYP2_DROME
A:
[6-102]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
A
K
--
Q
I
F
A
L
D
---
F
E
I
-----
F
G
R
---
V
-----
Q
G
V
F
FR
K
H
T
-
S
-
H
E
--
A
K
----
R
------
L
G
V
---
R
G
----
W
C
M
N
--
T
-
R
-
D
-
G
T
V
K
G
Q
--
L
E
--------
A
-
P
MMNLMEMKHWLENN
R
I
P
N
A
K
V
S
K
A
----
E
F
S
Q
I
QE
I
----
E
-----------
D
----
Y
T
F
T
S
F
D
----
I
K
----
H
-------
26
SP3
47.24
13%
-42
- C7 -
-
1MGT
-
OGT_THEKO
A:
[89-169]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
P
F
E
K
---------------------
K
---
V
Y
---
E
W
L
T
K
--
N
---
V
-
K
R
--
G
S
----
V
ITYGDL
A
K
A
---
L
N
----
T
S
P
R
--
A
-
V
-
G
-
G
A
M
K
R
N
--
P
Y
--------
P
-
I
--------------
V
V
P
C
H
R
V
V
A
-------
H
D
G
--
I
----
G
YYSS-------
G
----
I
E
E
K
K
F
L
----
L
E
----
I
-
E
G
V
---
8
HHSearch
45.42
29%
-384
- C2 -
-
2M3J
-
?
A:
[18-33]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
----
L
T
C
I
PG
D
-
P
-
Y
-
G
I
C
Y
I
I
-------------------------------------------------------------------------------------------------
15
Fugue
45.14
12%
-0
* C6 *
-
2V3S
-
OXSR1_HUMAN
A:
[1-96]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
P
I
S
L
V
L
R
L
R
N
S
--
K
K
E
L
N
D
---
I
R
F
E
F
--
T
P
G
R
---
D
T
---
A
E
G
V
S
--
Q
E
L
-
I
-
S
A
--
G
L
----
V
------
D
G
R
---
D
L
----
V
I
V
A
--
A
-
N
-
L
-
Q
K
I
V
E
E
--
P
Q
--------
S
-
N
--------------
R
S
V
T
F
K
L
A
S
G
----
V
E
G
S
D
--
I
----
P
-----------
D
----
D
G
K
L
I
G
F
----
A
Q
----
L
-
S
I
S
---
22
SP3
41.94
12%
33
* C9 *
-
1K2Y
-
ALGC_PSEAE
X:
[368-463]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
-----
S
D
I
S
T
--
P
----
E
---
I
N
I
T
V
--
T
E
D
S
KFA
I
I
---
E
A
L
Q
R
--
D
A
Q
-
W
-
G
E
--
G
N
----
I
------
T
T
L
---
D
G
----
V
R
V
D
--
Y
-
P
-
K
-
G
W
G
L
V
R
--
A
S
----------
N
--------------
T
T
P
V
L
V
L
R
F
E
----
A
D
T
E
E
--
E
----
L
-----------
E
----
R
I
K
T
V
F
R
----
N
Q
LKAV
D
-
S
S
L
-
P
V
25
SP3
41.67
16%
23
- C6 -
-
2PIA
2
?
?:
[224-321]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
F
G
A
T
N
T
N
A
R
E
--
N
T
-
P
F
T
---
V
R
L
S
---
R
S
G
T
---
S
F
---
E
----------
I
-
P
A
--
N
R
----
S
ILEV--
L
R
D
---
A
N
VRVP
S
S
C
E
--
S
G
T
-
C
-
G
S
C
K
T
A
---
L
--------
C
-
S
--------------
G
E
A
D
H
R
----------
D
M
V
--
L
----
R
-----------
D
----
D
E
K
G
T
Q
I
MVCV
S
R
----
A
-
K
S
A
-
E
L
18
Fugue
41.14
19%
22
- C7 -
-
4QNU
1
CMOB_ECOLI
A:
[1-323]
MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLLHSVTAESEEPLSAGQIKRIETLMRNLMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVP
G
D
R
Y
A
Q
M
R
N
--------------
V
Y
F
-
I
--
P
S
A
L
---
A
L
---
K
N
W
L
K
--
K
----------------------
C
G
F
---
V
D
----
I
R
I
A
--
D
-
V
-
S
-
V
T
---------------------------------
T
T
E
E
Q
R
R
T
E
W
----
M
V
T
E
S
--
L
----
A
-----------
D
FLDP
H
D
P
G
K
T
V
----
E
G
----
Y
-
P
A
P
-
K
R
14
Fugue
40.73
10%
-102
- C7 -
-
3ZTG
-
RBBP6_HUMAN
A:
[1-92]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
P
L
G
S
E
D
D
P
I
P
D
--
E
L
-
L
C
L
---
I
C
K
D
I
--
M
T
D
A
---
V
V
---
I
P
C
C
G
--
N
S
Y
-
C
-
D
E
--
C
I
----
R
------
T
A
L
---
L
E
----------
S
-
D
-
E
-
H
T
C
P
T
C
--
H
Q
--------
N
-
D
--------------
V
S
P
D
A
L
I
A
N
K
----
F
L
R
Q
A
--
V
----
N
-----------
N
----
F
K
N
E
T
G
Y
----
T
K
----
R
-
L
R
K
-
Q
-
23
SP3
38.01
20%
68
- C6 -
-
1J03
-
SBP3_ARATH
A:
[-1-100]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PMEFTAEQL
S
Q
Y
N
G
T
D
E
S
--
K
--
P
I
-
Y
V
A
---
I
-------
K
G
R
---
V
F
---
D
V
T
T
G
--
K
S
F
-
Y
G
S
G
--
G
D
----
Y
------
S
M
F
---
A
G
--------------
K
-
D
A
S
R
A
L
--
G
K
--------
M
-
S
--------------
K
N
E
E
D
V
S
P
S
L
EGLT
E
K
E
I
N
--
T
----
L
-----------
N
----
D
W
E
T
K
F
E
----
A
K
----
Y
-
P
V
V
G
R
V
11
HHSearch
35.85
38%
-60
- C5 -
-
2N5U
-
?
A:
[40-76]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
Q
----
V
------
G
Q
I
---
T
G
----
F
K
M
T
--
D
-
G
-
S
-
G
V
G
V
I
V
--
T
F
--------
D
-
D
-------------------
R
S
S
T
W
----
F
F
E
D
E
--
V
----
E
-----------------------------------------
4
HHSearch
34.15
29%
-102
- C10 -
-
3ISY
-
IPI_BACSU
A:
[59-82]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
--
S
K
E
K
---
M
F
---
T
Q
A
F
Q
--
N
L
T
-
L
-
E
S
--
G
E
----
T
------
Y
D
F
----------------------------------------------------------------------------------------------------------------------------
6
HHSearch
32.85
24%
-51
* C5 *
-
3CBN
-
?
A:
[29-68]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
A
R
G
--
H
P
N
-
V
-
T
A
GH
R
T
----
T
------
F
E
V
---
T
V
----
D
P
E
I
--
G
-
E
-
T
-
A
D
C
I
I
G
--
V
S
--------
S
-
S
--------------
D
S
------------------------------------------------------------------
29
SP3
32.68
13%
-24
- C7 -
-
1JJC
-
SYFB_THET8
B:
[400-474]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
P
E
--
A
I
-
P
F
R
---
P
---------
E
---
Y
A
---
N
R
L
L
G
--
T
S
Y
---
P
E
--
A
E
----
Q
------
I
A
I
LKR
L
G
----
C
R
V
E
--
G
-
E
-
G
-
P
T
Y
R
V
T
------------------------------
P
P
S
H
R
---
L
----
D
L
R
L
E
------------------------
E
D
L
V
E
E
V
----
A
R
IQG-
Y
-
E
T
I
-
P
L
28
SP3
32.02
11%
62
- C6 -
-
1KRH
1
BENC_ACIAD
A:
[106-205]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------I
H
H
F
E
G
T
L
A
R
V
E
N
LS
D
S
-
T
I
T
---
F
D
I
Q
L
--
D
D
G
Q
---------
P
D
I
H
--
F
-----
L
A
--
G
Q
----
Y
------
V
N
V
---
T
-------------
L
-
P
-
G
T
T
E
T
R
--
S
Y
--------
S
F
S
--------------
S
Q
P
G
N
R
L
T
G
F
----
V
V
R
N
V
-------
P
-----------
Q
----
G
K
M
S
E
Y
L
----
S
V
-------
Q
A
-
K
A
20
Fugue
27.66
12%
-23
- C4 -
-
3WIS
2
?
A:
[19-198]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKPDARFAWCVTGSGHLLDESIALALELPRADLFLSAAAEEVLPLYGWALPRLRKHFRVFRD
N
S
A
S
G
V
P
V
G
M
L
Y
--
H
G
-
M
Y
H
---
T
V
V
I
A
--
P
A
T
---------
S
N
T
V
A
--
K
C
A
-
F
-
G
I
--
S
D
----
T
------
L
P
T
---
N
M
----
Y
A
Q
A
--
G
-
K
-
Q
-
C
I
P
G
I
V
--
F
A
--------
C
-
D
--------------
T
E
P
T
V
V
T
Q
S
P
----
N
E
W
V
E
--
L
RPRA
I
-----------
E
----
L
D
N
V
E
R
L
----
S
R
----
F
-
E
Y
T
-
T
L
3
HHSearch
25.65
23%
25
* C10 *
-
3S99
-
PBP_BRUA2
A:
[312-344]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
L
N
P
--
F
T
G
P
---
I
K
---
K
Q
-
D
G
--
S
E
W
-
L
-
K
A
--
G
E
----
K
ADD---
Q
T
L
---
L
G
----
M
N
-----------------------------------------------------------------------------------------------------------------