@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQK6: (2017-11-27 )
MSLYATQDEKKQAAAKAALKHLPKGGILGVGTGSTVNFLIDLLPELQLEAAVASSQATADRLKKLGIEVVDMNHVVSLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPVEVIPMARSAVARKLVSLGGDPVYREGVVTDNGNVILDVFNLNILNAIDLEKTINNIPGVVTNGIFALNPATIAIVATNDGIEERTAQ

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5RP_A_5(4M8L)
RPIA_FRATW
[Raw transfer]



5RP_A_5(4M8L)
RPIA_FRATW
[Raw transfer]



5RP_B_4(3ENW)
RPIA_VIBVY
[Raw transfer]



5RP_B_22(4M8L)
RPIA_FRATW
[Raw transfer]



CIT_D_4(1M0S)
RPIA_HAEIN
[Raw transfer]



CIT_C_3(1M0S)
RPIA_HAEIN
[Raw transfer]



DER_A_17(1LK7)
RPIA_PYRHO
[Raw transfer]



R5P_A_2(3UW1)
?
[Raw transfer]



CIT_D_4(1M0S)
RPIA_HAEIN
[Raw transfer]



R5P_A_2(3UW1)
?
[Raw transfer]



DER_C_19(1LK7)
RPIA_PYRHO
[Raw transfer]



A5P_A_4(1UJ6)
RPIA_THET2
[Raw transfer]



DER_B_18(1LK7)
RPIA_PYRHO
[Raw transfer]



A5P_A_4(1UJ6)
RPIA_THET2
[Raw transfer]



DER_D_20(1LK7)
RPIA_PYRHO
[Raw transfer]



DER_B_18(1LK7)
RPIA_PYRHO
[Raw transfer]



5RP_A_3(3ENW)
RPIA_VIBVY
[Raw transfer]



5RP_A_2(1UJ5)
RPIA_THET2
[Raw transfer]



5RP_A_2(1UJ5)
RPIA_THET2
[Raw transfer]



5RP_B_6(3HHE)
RPIA_BARHE
[Raw transfer]



ABF_A_3(1O8B)
RPIA_ECOLI
[Raw transfer]



5RP_A_3(3HHE)
RPIA_BARHE
[Raw transfer]



5RP_B_6(3HHE)
RPIA_BARHE
[Raw transfer]



ABF_A_3(1O8B)
RPIA_ECOLI
[Raw transfer]



3GR_D_13(3KWM)
RPIA_FRATT
[Raw transfer]



EDO_A_3(3U7J)
?
[Raw transfer]



EDO_A_7(5UF2)
RPIA_NEIG2
[Raw transfer]



ABF_A_3(3ENV)
RPIA_VIBVY
[Raw transfer]



MLT_A_4(4NML)
?
[Raw transfer]



EDO_A_7(5UF2)
RPIA_NEIG2
[Raw transfer]



PGO_B_10(3IXQ)
RPIA_METJA
[Raw transfer]



PGO_D_19(3IXQ)
RPIA_METJA
[Raw transfer]



PGO_C_15(3IXQ)
RPIA_METJA
[Raw transfer]



PGO_C_15(3IXQ)
RPIA_METJA
[Raw transfer]



PGO_A_8(3IXQ)
RPIA_METJA
[Raw transfer]



PGO_B_12(3IXQ)
RPIA_METJA
[Raw transfer]



ABF_B_4(3ENV)
RPIA_VIBVY
[Raw transfer]



PEG_C_9(3KWM)
RPIA_FRATT
[Raw transfer]



PEG_C_12(3KWM)
RPIA_FRATT
[Raw transfer]



PG4_A_9(4IO1)
RPIA_FRATT
[Raw transfer]
21 PsiBlast_CBE 78.8363% -14 - C4 -3ENW 3.0 RPIA_VIBVY
3 PsiBlast_PDB 78.8363% -11 - C4 -3ENW 3.6 RPIA_VIBVY
1 PsiBlast_PDB 78.3963% -7 - C4 -3ENQ - RPIA_VIBVY -
22 PsiBlast_CBE 77.6563% -14 - C4 -3ENV 2.8 RPIA_VIBVY
2 PsiBlast_PDB 77.5063% -8 - C4 -3ENV 2.0 RPIA_VIBVY
53 HHSearch 77.2761% 1 - C4 -1M0S 3.1 RPIA_HAEIN
23 PsiBlast_CBE 76.8862% -2 - C4 -1M0S 3.1 RPIA_HAEIN
49 HHSearch 76.5063% -7 - C4 -1LKZ - RPIA_ECOLI -
7 PsiBlast_PDB 76.3661% -8 - C4 -1LKZ - RPIA_ECOLI -
4 PsiBlast_PDB 75.6962% 3 - C4 -1M0S 3.1 RPIA_HAEIN
50 HHSearch 75.5463%-106 - C4 -1O8B 4.4 RPIA_ECOLI
48 HHSearch 75.1461% 7 * C4 *4X84 - RPIA_PSEAE -
6 PsiBlast_PDB 75.0061% -3 - C4 -1KS2 - RPIA_ECOLI -
8 PsiBlast_PDB 74.2661%-108 - C4 -1O8B 4.4 RPIA_ECOLI
47 HHSearch 74.2455% 0 - C4 -3UW1 4.8 ?
57 HHSearch 74.0857% 2 - C4 -4M8L 3.7 RPIA_FRATW
5 PsiBlast_PDB 73.8961% 3 - C4 -4X84 - RPIA_PSEAE -
32 PsiBlast_CBE 73.5757% 3 - C4 -3KWM 2.8 RPIA_FRATT
56 HHSearch 73.2757% 4 - C4 -4IO1 - RPIA_FRATT -
9 PsiBlast_PDB 72.9957% -3 - C4 -3KWM - RPIA_FRATT -
31 PsiBlast_CBE 72.8957% 2 - C4 -3KWM 2.4 RPIA_FRATT
11 PsiBlast_PDB 72.8257% 1 - C4 -4M8L 3.7 RPIA_FRATW
29 PsiBlast_CBE 72.6557% 0 - C4 -4M8L 4.1 RPIA_FRATW
13 PsiBlast_PDB 72.4554% 1 - C4 -3UW1 4.8 ?
12 PsiBlast_PDB 72.0354% 2 - C4 -3U7J 2.8 ?
61 HHSearch 68.4747% 10 - C4 -5UF2 2.6 RPIA_NEIG2
14 PsiBlast_PDB 68.3547% 8 - C4 -5UF2 2.6 RPIA_NEIG2
17 PsiBlast_PDB 65.8039% 2 - C4 -1LK7 4.0 RPIA_PYRHO
59 HHSearch 65.7539% -14 - C4 -1UJ5 3.8 RPIA_THET2
37 PsiBlast_CBE 65.7239% 3 - C4 -1LK7 4.1 RPIA_PYRHO
60 HHSearch 65.5239% -14 - C4 -1UJ6 4.0 RPIA_THET2
20 PsiBlast_PDB 65.4738% -9 - C4 -1UJ6 4.0 RPIA_THET2
44 PsiBlast_CBE 65.3238% -9 - C4 -1UJ5 3.8 RPIA_THET2
38 PsiBlast_CBE 65.1739% 1 - C4 -1LK7 4.0 RPIA_PYRHO
65 HHSearch 64.9643% -1 - C4 -3IXQ 2.7 RPIA_METJA
39 PsiBlast_CBE 64.9339% -1 - C4 -1LK7 4.2 RPIA_PYRHO
51 HHSearch 63.8040% 4 - C4 -1LK7 4.2 RPIA_PYRHO
63 HHSearch 63.3140% -7 - C4 -3HHE 3.6 RPIA_BARHE
45 PsiBlast_CBE 62.4939% -7 - C4 -3HHE 3.6 RPIA_BARHE
46 PsiBlast_CBE 62.1239% -2 - C4 -3HHE 2.9 RPIA_BARHE
34 PsiBlast_CBE 61.1644% -4 - C4 -3IXQ 3.1 RPIA_METJA
66 HHSearch 61.1336% -5 - C4 -4NML 3.2 ?
15 PsiBlast_PDB 60.8744% -3 - C4 -3IXQ 2.0 RPIA_METJA
35 PsiBlast_CBE 60.5444% -2 - C4 -3IXQ 2.7 RPIA_METJA
36 PsiBlast_CBE 60.5144% -5 - C4 -3IXQ 3.5 RPIA_METJA