@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTX8: (2017-12-15 )
MSSLIQPELFFSALSPAEQRIQQALEDIRQGKPVLVMDDFDRENEADLIVAAETLTVETMVRMIHDGSGIVCLCLTEELADHLELPPMVSQNSSQFHTAFTVTIEAAQGVTTGVSAKDRVTTIKTAIKDGAVASDLNRPGHVFPLRARNGGVLTRRGHTEGTIDLARLAGLKPAGVLCELTNPDGTMASGIQVLAYAQTHHLTVITIEELVQYRQQHGI

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5RP_A_3(4P77)
RIBB_VIBCH
[Raw transfer]




5RP_B_5(4P77)
RIBB_VIBCH
[Raw transfer]




RES_A_3(4P6P)
RIBB_VIBCH
[Raw transfer]




5SP_A_3(3LQU)
RIBB_SALTY
[Raw transfer]




RES_B_4(4P6C)
RIBB_VIBCH
[Raw transfer]




RES_B_7(4P6P)
RIBB_VIBCH
[Raw transfer]




RES_B_7(4P6P)
RIBB_VIBCH
[Raw transfer]




RES_A_3(4P6C)
RIBB_VIBCH
[Raw transfer]




5RP_A_3(4P8E)
RIBB_VIBCH
[Raw transfer]




5RP_B_8(4P8E)
RIBB_VIBCH
[Raw transfer]




GOL_A_5(1K4O)
RIB3_MAGO7
[Raw transfer]




GOL_A_5(1K4O)
RIB3_MAGO7
[Raw transfer]




5RP_D_4(1TKU)
RIB3_CANAL
[Raw transfer]




5RP_D_4(1TKU)
RIB3_CANAL
[Raw transfer]




GOL_A_8(4FFJ)
?
[Raw transfer]




GOL_A_8(4FFJ)
?
[Raw transfer]




5RP_C_3(1TKU)
RIB3_CANAL
[Raw transfer]




5RP_A_2(2RIU)
RIB3_CANAL
[Raw transfer]




GOL_A_5(3MIO)
RIBBA_MYCTA
[Raw transfer]




GOL_A_5(3MIO)
RIBBA_MYCTA
[Raw transfer]




GOL_B_12(3MIO)
RIBBA_MYCTA
[Raw transfer]




GOL_B_12(3MIO)
RIBBA_MYCTA
[Raw transfer]




EDO_A_3(4P6D)
RIBB_VIBCH
[Raw transfer]




50 Fugue 92.3060%-128 - C4 -1G57 - RIBB_ECOLI -
5 PsiBlast_PDB 91.7660%-128 - C4 -1G57 - RIBB_ECOLI -
64 HHSearch 91.1961%-124 - C4 -1G57 - RIBB_ECOLI -
3 PsiBlast_PDB 90.3661%-119 - C4 -3LS6 - RIBB_SALTY -
2 PsiBlast_PDB 89.9761%-134 - C4 -3LRJ - RIBB_SALTY -
6 PsiBlast_PDB 88.4760%-132 - C4 -1G58 - RIBB_ECOLI -
13 PsiBlast_PDB 88.4361%-120 - C4 -3H07 - RIBB_YERPE -
48 Fugue 88.3659%-105 - C4 -1G57 - RIBB_ECOLI -
25 PsiBlast_CBE 88.2561%-123 - C4 -3LQU - RIBB_SALTY -
1 PsiBlast_PDB 87.6861%-115 - C4 -3LQU 3.8 RIBB_SALTY
58 HHSearch 87.3760%-112 * C4 *4P6P 4.5 RIBB_VIBCH
49 Fugue 86.8758%-100 - C4 -1IEZ - RIBB_ECOLI -
10 PsiBlast_PDB 86.5362%-119 - C4 -4P77 4.8 RIBB_VIBCH
9 PsiBlast_PDB 86.3862%-120 - C4 -4P6P 4.3 RIBB_VIBCH
4 PsiBlast_PDB 86.3160%-107 - C4 -1IEZ - RIBB_ECOLI -
67 HHSearch 86.0961% -99 - C4 -1IEZ - RIBB_ECOLI -
32 PsiBlast_CBE 85.5662%-116 - C4 -4P6C 4.7 RIBB_VIBCH
7 PsiBlast_PDB 85.3062%-116 - C4 -4P6C 4.8 RIBB_VIBCH
30 PsiBlast_CBE 85.2362%-117 - C4 -4P6P 4.5 RIBB_VIBCH
28 PsiBlast_CBE 85.1962%-117 - C4 -4P8E 4.2 RIBB_VIBCH
11 PsiBlast_PDB 85.0662%-117 - C4 -4P8E 4.1 RIBB_VIBCH
8 PsiBlast_PDB 84.9662%-123 - C4 -4P6D 2.7 RIBB_VIBCH
29 PsiBlast_CBE 84.4662%-123 - C4 -4P77 5.2 RIBB_VIBCH
61 HHSearch 83.8544%-125 - C4 -4FFJ 3.0 ?
18 PsiBlast_PDB 83.1145%-130 - C4 -4FFJ 3.0 ?
63 HHSearch 80.1441% -83 - C4 -1K4O 3.4 RIB3_MAGO7
38 PsiBlast_CBE 79.6440% -91 - C4 -1K4O 3.4 RIB3_MAGO7
36 PsiBlast_CBE 79.6245%-100 - C4 -1TKU 3.1 RIB3_CANAL
60 HHSearch 79.3244% -94 - C4 -1TKU 3.1 RIB3_CANAL
20 PsiBlast_PDB 78.5945% -97 - C4 -1TKU 2.9 RIB3_CANAL
35 PsiBlast_CBE 78.4745%-100 - C4 -2RIU 3.6 RIB3_CANAL
66 HHSearch 76.9646% -83 - C4 -3MIO 2.7 RIBBA_MYCTA
15 PsiBlast_PDB 76.7246% -89 - C4 -3MIO 2.7 RIBBA_MYCTA
65 HHSearch 76.1146% -84 - C4 -3MIO 2.6 RIBBA_MYCTA
33 PsiBlast_CBE 75.5546% -91 - C4 -3MIO 2.6 RIBBA_MYCTA