@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : 134_tII_ARATH: (2014-05-02 )
VTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCGYMRNPSLRRFVSTPNARKVSKSCKLPIPRC

Atome Classification :

(20 SA) ----------------------------------------------------------------...--.--.--.--..---.10....--.-...--20-.-----........30-----------.-----.-......40.-.-.------------..-----..--------.50------....---.....60...-..-------..-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------------------------------------VTC--S--P--M--QL---SPCATAI--T-SSS--P--P-----SALCCAKLKE-----------Q-----R-PCLCGYMRN-P-S------------LR-----RF--------VS-------TPNA---RKVSKSCKLP-IP-------RC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 HHSearch 94.8539%-100 - C4 -1N89 NLT2G_WHEAT A:[1-67] -----------------------------------------------------------------AC--Q--A--S--QL---AVCASAI--L-SGA--K--P-----SGECCGNLRA-----------Q-----Q-GCFCQYAKD-P-T------------YG-----QY--------IR-------SPHA---RDTLTSCGLA-VP-------HC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 HHSearch 92.6938%-106 - C4 -1L6H - NLTPX_ORYSJ A:[1-68] ----------------------------------------------------------------AGC--N--A--G--QL---TVCTGAI--A-GGA--R--P-----TAACCSSLRA-----------Q-----Q-GCFCQFAKD-P-R------------YG-----RY--------VN-------SPNA---RKAVSSCGIA-LP-------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 SP3 92.3138%-106 - C4 -1L6H - NLTPX_ORYSJ A:[1-69] ----------------------------------------------------------------AGC--N--A--G--QL---TVCTGAI--A-GGA--R--P-----TAACCSSLRA-----------Q-----Q-GCFCQFAKD-P-R------------YG-----RY--------VN-------SPNA---RKAVSSCGIA-LP-------TCH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 Fugue 92.3138%-106 - C4 -1L6H - NLTPX_ORYSJ A:[1-69] ----------------------------------------------------------------AGC--N--A--G--QL---TVCTGAI--A-GGA--R--P-----TAACCSSLRA-----------Q-----Q-GCFCQFAKD-P-R------------YG-----RY--------VN-------SPNA---RKAVSSCGIA-LP-------TCH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 Fugue 83.3036% -90 - C4 -2RKN DIRL1_ARATH A:[1-77] --------------------------------------------------------------AIDLCGMS--Q--D--EL---NECKPAV--S-KEN--PTSP-----SQPCCTALQHA----------D-----F-ACLCGYKNS-P-W------------LG-----SFG-------VD-------PELA---SALPKQCGLA-NAP------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 HHSearch 83.1234%-101 - C4 -2RKN DIRL1_ARATH A:[9-77] ------------------------------------------------------------------------Q--D--EL---NECKPAV--S-KENPTS--P-----SQPCCTALQH-----------A-----DFACLCGYKNS-P-W------------LG-----SFG-------VD-------PELA---SALPKQCGLA-NAP------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 HHSearch 75.5826% -95 - C4 -1T12 - NLTP1_TOBAC A:[3-78] -----------------------------------------------------------------TC--G--QVTS--NL---APCLAYL--R-NTG-----P-----LGRCCGGVKALVNSARTTEDRQ-----I-ACTC--LKS-A-A-------------G-----AISG------IN-------LGKA---AGLPSTCGVN-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 HHSearch 75.2827% -93 - C4 -2ALG NLTP1_PRUPE A:[2-79] ----------------------------------------------------------------ITC--G--Q--VSSSL---APCIPYV--R-GGG--A--V-----PPACCNGIRNVNNLARTTPDRQ-----A-ACNC--LKQ-L-S-------------A-----SVPG------VN-------PNNA---AALPGKCGVS-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 HHSearch 71.5426% -74 - C4 -1AFH - NLTP_MAIZE A:[3-80] -----------------------------------------------------------------SC--G--QVAS--AI---APCISYA--R-GQG--SG-P-----SAGCCSGVRSLNNAARTTADRR-----A-ACNC--LKN-A-A-------------A-----GVSG------LN-------AGNA---ASIPSKCGVS-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 HHSearch 69.9123% -65 - C4 -1SIY - NLTP1_VIGRR A:[2-78] -----------------------------------------------------------------TC--G--QVQG--NL---AQCIGFL--Q-KGG--V--V-----PPSCCTGVKNILNSSRTTADRR-----A-VCSCLKAAA-G-A------------VR------G--------IN-------PNNA---EALPGKCGVN-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 HHSearch 68.5425% -98 - C4 -1HYP - HPSE_SOYBN A:[10-73] ------------------------------------------------------------------------------DL---SICLNILGGS-LGT-----------VDDCCALIGG-----------LGDIEAI-VCLCIQLRA----------------LG-----I---------LN-------LNRNL--QLILNSCGRS-YP-------S--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 SP3 66.9622% -70 - C4 -1FK5 NLTP_MAIZE A:[1-93] ---------------------------------------------------------------AISC--GQVA--S--AI---APCISYA--R-GQG--SG-P-----SAGCCSGVRS-----------L-----N-NA----ART-T-ADRRAACNCLKNAAA-----GVSG------LN-------AGNA---ASIPSKCGVS-IPYTISTSTDCSRVN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 HHSearch 64.1725% -58 - C4 -1BWO NLTP1_WHEAT A:[8-78] ---------------------------------------------------------------------------S--LV---RPCLSYV--Q-GGP--G--P-----SGQCCDGVKNLHNQARSQSDRQ-----S-ACNCLKGIA-R-G------------IH------N--------LN-------EDNA---RSIPPKCGVN-LP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 HHSearch 58.1822% -58 - C4 -3OB4 - ? A:[427-485] ------------------------------------------------------------------------------------------------------H-----QERCCNELNE-----------FEN---NQRCMCEALQQ-I-M------------EN-----QSDRL-----QGRQQEQQFKREL---RNLPQQCGLR-AP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 SP3 55.3111% -62 - C4 -1PS6 PDXA_ECOLI A:[1-328] VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQ--T--A--G--TLTLLPVALRAP--V-TAG--Q--L-----AVENGHYVVE-----------T-----L-ARACDGCLN-G-E------------FA-----AL--------IT-------GPVH---KGVINDAGIP-FT-------GHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ
28 SP3 52.2014% -78 - C4 -1U78 - TC3A_CAEEL A:[2-104] -------------------------------------------------------------PRGSAL--S--D--T--ER---AQ-LDVM--K-LLN--V--S-----LHEMSRKISR-----------S-----R-HCIRVYLKD-PVS------------YG-----TSKRAPRRKALS-------VRDE---RNVIRAASNS-CK-------TARDIRNELQLSASKRTILNVIKRSG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21 Fugue 50.1011% -87 - C4 -3ZR8 ? X:[1-65] ----------------------------------------------------------------GPT--E--K--A--AV---KKMAKAI--M-ADP--S--K-----ADDVYQKWAD-----------K-----G-------YTL-T-Q------------LS-----DF--------LK-------SKTRGKYDRVYNGYMTY-RD-------YV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 SP3 49.1916% -75 - C4 -1KNG - CYCY_BRADU A:[50-193] ---------------------------------------------------RPAPQTALPPLEGLQA--D--N--V--QV---PGLDPAA--F-KG---K--VSLVNVWASWCVPCHD-----------E-----A-PLLTELGKD-K-R------------FQLVGINYK--------DA-------ADNA---RRFLGRYGNP-FG-------RVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKAL-------------------------------------------------------------------------------------------------------------------------------------------
19 Fugue 47.0014% -64 - C4 -1S6D - 2SS8_HELAN A:[1-103] --------------------------------------PYGRGRTESGCYQQMEEAEMLNHCGMYLM--K--N--L--GE---RSQVSPR--M-REE--D--H-----KQLCCMQLKNL----------D-----E-KCMCPAIMM-M--------------LN-----EP--------MW-------IRMR---DQVMSMAHNL-PI-------ECNLMSQPCQM----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 SP3 44.608% -97 * C4 *1F9M - TRXF_SPIOL A:[10-121] --------------------------------------------------------MEAIVGKVTEV--N--K--D--TF------WPIV--KAAGD--K--PVVLDMFTQWCGPCKA-----------M-----A-PKYEKLAEEYL-DVI----------FL-----KL--------DC-------NQEN---KTLAKELGIRVVP-------TFKILKENSVVGEVTGAKYDKLLEAIQAARS--------------------------------------------------------------------------------------------------------------------------------------------------------------------


User Run . : Multi Template Modeling Result:

(2 SA) .........10........20........30........40........50........60.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) VTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCGYMRNPSLRRFVSTPNARKVSKSCKLPIPRC
40 96.39100%-115 - C- -M040 - A:[1-90] VTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCGYMRNPSLRRFVSTPNARKVSKSCKLPIPRC
41 95.67100%-108 - C- -M041 - A:[1-90] VTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCGYMRNPSLRRFVSTPNARKVSKSCKLPIPRC