@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1374: (2016-03-24 )
VAVEKITMPKLGESVTEGTISSWLVKPGDTVEKYDAIAEVLTDKVTAEIPSSFSGTIKEILAEEDETLEVGEVICTIETEEASSSEPVVEAEQTEPKTPEKQETKQVKLAEAPASGRFSPAVLRIAGENNIDLSTVEGTGKGGRITRKDLLQVIENGPVAPKREEVKSAPQEKEATPNPVRSAAGDREIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNTVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTWAGDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVNSTGSFGSVQSMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKAKVEKISKENTALY

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......-180.......-190-........200.......210.......220.......230-.......240.......250.......260....--...--270.........280.......290.......300.......310.......320....-...330.......340.......350---.......360.....-..370........380.......390.......400.......410....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) VAVEKITMPKLGESVTEGTISSWLVKPGDTVEKYDAIAEVLTDKVTAEIPSSFSGTIKEILAEEDETLEVGEVICTIETEEASSSEPVVEAEQTEPKTPEKQETKQVKLAEAPASGRFSPAVLRIAGENNIDLSTVEGTGKGGRITRKDLLQVIENGPVAPKREEVKSAPQEKEATPNP-VRSAAGDREI-PI--NGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNTVKD-SFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTW--AGD--K--IIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADM-EGGTFTVNSTGSFGSVQSMGIINHPQ---AAILQVESIVKRPVI-IDDM-IAVRDMVNLCLSIDHRILDGLLAGKFLQAIKAKVEKISKENTALY
22 PsiBlast_CBE 99.4397%-121 - C3 -3MAE ? B:[9-248] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPPVRSAAGDKEI-PI--NGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKD-SFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTW--AGD--K--IIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADM-EGGTFTVNSTGSFGSVQSMGIINHPQ---AAILQVESIVKRPVI-IDDM-IAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANVEKISKENTALY
21 PsiBlast_CBE 98.7297%-122 - C3 -3MAE ? C:[10-248] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PPVRSAAGDKEI-PI--NGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKD-SFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTW--AGD--K--IIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADM-EGGTFTVNSTGSFGSVQSMGIINHPQ---AAILQVESIVKRPVI-IDDM-IAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANVEKISKENTALY
60 HHSearch 96.1299%-120 - C3 -3MAE ? A:[15-247] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGDKEI-PI--NGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKD-SFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTW--AGD--K--IIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADM-EGGTFTVNSTGSFGSVQSMGIINHPQ---AAILQVESIVKRPVI-IDDM-IAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANVEKISKENTAL-
1 PsiBlast_PDB 96.0897%-120 - C3 -3MAE ? A:[15-248] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGDKEI-PI--NGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKD-SFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTW--AGD--K--IIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADM-EGGTFTVNSTGSFGSVQSMGIINHPQ---AAILQVESIVKRPVI-IDDM-IAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANVEKISKENTALY
61 HHSearch 75.6132%-101 - C3 -1DPB - ODP2_AZOVI A:[404-637] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKYGEIEEV-PM--TRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKA-VAEK-AGVKLTVLPLLLKACAYLLKELPDFNSSL--APSGQA--LIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAM-QGACFTISSLGHIGGTAFTPIVNAPE---VAILGVSKASMQPVW-DGKA-FQPRLMLPLSLSYDCRVINGAAAARFTKRLGDLLADIRAILL---
30 PsiBlast_CBE 75.0334%-114 - C3 -2II5 ODB2_BOVIN B:[31-252] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRTE-PV--KGFHKAMVKTMSAA-LKIPHFGYCDEVDLTELVKLREELKPIAFAR--GIKLSFMPFFLKAASLGLLQFPILNASVDENCQ--N--ITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDL-IGGTFTLSNIGSIGGTYAKPVILPPE---VAIGALGTIKALPRF-NEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLE----------
44 PsiBlast_CBE 74.5334%-111 - C3 -2II3 ODB2_BOVIN B:[31-252] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRTE-PV--KGFHKAMVKTMSAA-LKIPHFGYCDEVDLTELVKLREELKPIAFAR--GIKLSFMPFFLKAASLGLLQFPILNASVDENCQ--N--ITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDL-IGGTFTLSNIGSIGGTYAKPVILPPE---VAIGALGTIKALPRF-NEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLE----------
7 PsiBlast_PDB 74.3133%-109 - C3 -1SCZ - ODO2_ECOLI A:[172-395] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ARSEKRV-PM--TRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGE-AFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASI--DGD--D--VVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDL-TGGNFTITNGGVFGSLMSTPIINPPQ---SAILGMHAIKDRPMA-VNGQ-VEILPMMYLALSYDHRLIDGRESVGFLVTIKELLE----------
78 Fugue 74.0437%-112 * C3 *1B5S - ODP2_GEOSE A:[184-425] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAKPAT-TEGEFPETRE--KMS-GIRRAIAKAMVHSKHTAPHVTLMDEADVTKLVAHRKKFKA-IAAE-KGIKLTFLPYVVKALVSALREYPVLNTSIDDETE--E--IIQKHYYNIGIAADTDRGLLVPVIKHADRKPIFALAQEINELAEKARDGKLTPGEMK-GASCTITNIGSAGGQWFTPVI--NHPEV-AILGIGRIAEKPIV-RDGE-IVAAPMLALSLSFDHRMIDGATAQKALNHIKRLLSDPELLLM---
8 PsiBlast_PDB 73.8033%-115 - C3 -1E2O ODO2_ECOLI A:[1-224] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ARSEKRV-PM--TRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGE-AFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASI--DGD--D--VVYHNYFDVSMAVST--GLVTPVLRDVDTLGMADIEKKIKELAVKG-DGKLTVEDL-TGGNFTITNGGVFGSLMSTPIINPPQ---SAILGMHAIKDRPMA-VNGQ-VEILPMMYLALSYDHRLIDGRESVGFLVTIKELLE----------
64 HHSearch 73.7335%-109 - C3 -3RQC - ? A:[6-222] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEIL-EM--HGLRRIIFDKMTKAKQIMPHFTVMEEVDVTSMVSILDSAKA-R-----NRKVTVTGFLARIVPSILKQYPYLNAIY--DETRRV--YILKKYYNIGIAVDTPDGLNVFVIKDADRKSMVEISAEISDKASRARENKLQLDEV-QDSTFTITNVGTIGGIMSTPIINYPE---VAILGVHRILERE----------GRKYMYLSLSCDHRLIDGAVATRFIVDLKKVIEDPNAIIY---
15 PsiBlast_PDB 73.6234%-107 - C3 -2II3 ODB2_BOVIN A:[31-252] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRTE-PV--KGFHKAMVKTMSAA-LKIPHFGYCDEVDLTELVKLREELKPIAFAR--GIKLSFMPFFLKAASLGLLQFPILNASVDENCQ--N--ITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDL-IGGTFTLSNIGSIGGTYAKPVILPPE---VAIGALGTIKALPRF-NEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLE----------
12 PsiBlast_PDB 73.6135%-111 - C3 -3RQC - ? A:[6-215] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEILEM--HGLRRIIFDKMTKAKQIMPHFTVMEEVDVTSMVSILDSAKA-RNRK-----VTVTGFLARIVPSILKQYPYLNAIY--DET--RRVYILKKYYNIGIAVDTPDGLNVFVIKDADRKSMVEISAEISDKASRARENKLQLDEV-QDSTFTITNVGTIGGIMSTPIINYPE---VAILGVHRILER----------EGRKYMYLSLSCDHRLIDGAVATRFIVDLKKVIE----------
58 HHSearch 73.5733% -99 - C3 -2II3 ODB2_BOVIN A:[29-260] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKDRTE-PV--KGFHKAMVKTMSAAL-KIPHFGYCDEVDLTELVKLREELKP-IAFA-RGIKLSFMPFFLKAASLGLLQFPILNASV--DENCQN--ITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDL-IGGTFTLSNIGSIGGTYAKPVILPPE---VAIGALGTIKALPRFNEKGE-VCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLLD--
6 PsiBlast_PDB 73.5233%-113 - C3 -1C4T ODO2_ECOLI A:[2-224] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSEKRV-PM-----RKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGE-AFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASI--DGD--D--VVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDL-TGGNFTITNGGVFGSLMSTPIINPPQ---SAILGMHAIKDRPMA-VNGQ-VEILPMMYLALSYDHRLIDGRESVGFLVTIKELLE----------
49 PsiBlast_CBE 73.4134%-113 - C3 -2IHW ODB2_BOVIN D:[31-252] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRTE-PV--KGFHKAMVKTMSAA-LKIPHFGYCDEVDLTELVKLREELKPIAFAR--GIKLSFMPFFLKAASLGLLQFPILNASVDENCQ--N--ITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDL-IGGTFTLSNIGSIGGTYAKPVILPPE---VAIGALGTIKALPRF-NEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLE----------
40 PsiBlast_CBE 73.3234%-111 - C3 -2II3 ODB2_BOVIN F:[31-252] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRTE-PV--KGFHKAMVKTMSAA-LKIPHFGYCDEVDLTELVKLREELKPIAFAR--GIKLSFMPFFLKAASLGLLQFPILNASVDENCQ--N--ITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDL-IGGTFTLSNIGSIGGTYAKPVILPPE---VAIGALGTIKALPRF-NEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLE----------
24 PsiBlast_CBE 73.3034%-111 - C3 -2II5 ODB2_BOVIN H:[31-252] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRTE-PV--KGFHKAMVKTMSAA-LKIPHFGYCDEVDLTELVKLREELKPIAFAR--GIKLSFMPFFLKAASLGLLQFPILNASVDENCQ--N--ITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDL-IGGTFTLSNIGSIGGTYAKPVILPPE---VAIGALGTIKALPRF-NEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLE----------
17 PsiBlast_PDB 73.2634%-110 - C3 -2II5 ODB2_BOVIN A:[31-252] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRTE-PV--KGFHKAMVKTMSAA-LKIPHFGYCDEVDLTELVKLREELKPIAFAR--GIKLSFMPFFLKAASLGLLQFPILNASVDENCQ--N--ITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDL-IGGTFTLSNIGSIGGTYAKPVILPPE---VAIGALGTIKALPRF-NEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLE----------
42 PsiBlast_CBE 73.2234%-109 - C3 -2II3 ODB2_BOVIN D:[31-252] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRTE-PV--KGFHKAMVKTMSAA-LKIPHFGYCDEVDLTELVKLREELKPIAFAR--GIKLSFMPFFLKAASLGLLQFPILNASVDENCQ--N--ITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDL-IGGTFTLSNIGSIGGTYAKPVILPPE---VAIGALGTIKALPRF-NEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLE----------