@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2343: (2016-04-02 )
MTRKETIQFGAIIHGVGGTTDGWRHPDINPAASTDLDFYKTRAKIAEQGLFSFVFIADGLFISEKSIPHFLNRFEPITILSALAESTENIGLVGTFSTSFTEPFTLARQLSSLDHISSGRAGWNLVTSPQEGAARNHSKKNLPTHSDRYTIAAEHLKVVRGLWNSWEEDAFTYNKETGEFFNPEKLHHLNHQGEYFQVEGPLNIGRSKQGEPVVFQAGASSTGRDFAAQNAEAIFTHSDSLEEAVEFYRDVKSRAEKAGRNADEVRIFPGISPIVADTLEEAEAKYTEFASLIPIENAVTYLARYFDDYDLSQFDLDAPFPDLGDIGKNAFQSTTDRIKKEAKERHLTLRQVATEAATPKTPFIGTKEQVADLIEVWFQNEAADGFIIASDIPGTFETFVEQVIPLLQSRGLYRNEYPATTLRGNLGLTIPQNKQAVETK

Atome Classification :

(20 SA) ....------.....10........20........30........40........50........60....-------------..---------.-.70........80........90.....-.-..100........110.......120.......130.......140...--------.---...150.......160.-..-....170.......180.......190....-...200-........-210.......-220.......230......-.--240...-....250.......260.......270.......280.......290.......300.....--..310.......320.......330.......340-.......350----.....------.----..360-----........370.......380......-.390-.-------.-..-.....400.......410.......420.......430.......440
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MTRK------ETIQFGAIIHGVGGTTDGWRHPDINPAASTDLDFYKTRAKIAEQGLFSFVFIADGLFISEK-------------SI---------P-HFLNRFEPITILSALAESTENIGLVGTF-S-TSF-TEPFTLARQLSSLDHISSGRAGWNLVTSPQEGAARNHSKKNLPTH--------S---DRYTIAAEHLKVVRGLW-NS-WEEDAFTYNKETGEFFNPEKLHHLNHQGEYF-QVEG-P-LNIGRSKQ-GEPVVFQAGA-SSTGRDFAAQNAEAIFTHS-D--SLEEAV-EFYRDVKSRAEKAGRNADEVRIFPGISPIVADTLEEAEAKYTEFASLIPIENAVTYLARYFD--DYDLSQFDLDAPFPDLGDIGKNAFQSTTDRIKKEA-KERHLTLRQ-----VATEA------A----TPKT------PFIGTKEQVADLIEVWFQNEAADGFII-AS---D-------I-PG-TFETFVEQVIPLLQSRGLYRNEYPATTLRGNLGLTIPQNKQAVETK
1 PsiBlast_PDB 96.7175% -84 - C4 -1TVL - MOXC_BACSU A:[3-432] --RA------DFIQFGAMIHGVGGTTDGWRHPDVDPSASTNIEFYMKKAQTAEKGLFSFIFIADGLFISEK-------------SI---------P-HFLNRFEPITILSALASVTKNIGLVGTF-S-TSF-TEPFTISRQLMSLDHISGGRAGWNLVTSPQEGAARNHSKSNLPEH--------T---ERYEIAQEHLDVVRGLW-NS-WEHDAFIHNKKTGQFFDQAKLHRLNHKGKYF-QVEG-P-LNIGRSKQ-GEPVVFQAGS-SETGRQFAAKNADAIFTHS-N--SLEETK-AFYADVKSRAADEGRDPSSVRIFPGISPIVADTEEEAEKKYREFAELIPIENAVT------------------------------------------EA-KARNLTLRE-----VAQEM------A----FPRT------LFIGTPERVASLIETWFNAEAADGFIV-GS---D-------I-PG-TLDAFVEKVIPILQERGLYRQDYRGGTLRENLGLGIPQ--------
41 Fugue 96.6675% -83 - C4 -1TVL - MOXC_BACSU A:[3-432] --RA------DFIQFGAMIHGVGGTTDGWRHPDVDPSASTNIEFYMKKAQTAEKGLFSFIFIADGLFISEK-------------SI---------P-HFLNRFEPITILSALASVTKNIGLVGTF-S-TSF-TEPFTISRQLMSLDHISGGRAGWNLVTSPQEGAARNHSKSNLPEH--------T---ERYEIAQEHLDVVRGLW-NS-WEHDAFIHNKKTGQFFDQAKLHRLNHKGKYF-QVEG-P-LNIGRSKQ-GEPVVFQAGS-SETGRQFAAKNADAIFTHS-N--SLEETK-AFYADVKSRAADEGRDPSSVRIFPGISPIVADTEEEAEKKYREFAELIPIENA------------------------------------------VTEA-KARNLTLRE-----VAQEM------A----FPRT------LFIGTPERVASLIETWFNAEAADGFIV-GS---D-------I-PG-TLDAFVEKVIPILQERGLYRQDYRGGTLRENLGLGIPQ--------
25 HHSearch 96.5076% -86 - C4 -1TVL - MOXC_BACSU A:[3-432] --RA------DFIQFGAMIHGVGGTTDGWRHPDVDPSASTNIEFYMKKAQTAEKGLFSFIFIADGLFISEK-------------SI---------P-HFLNRFEPITILSALASVTKNIGLVGTF-S-TSF-TEPFTISRQLMSLDHISGGRAGWNLVTSPQEGAARNHSKSNLPEH--------T---ERYEIAQEHLDVVRGLW-NS-WEHDAFIHNKKTGQFFDQAKLHRLNHKGKYF-QVEG-P-LNIGRSKQ-GEPVVFQAGS-SETGRQFAAKNADAIFTHS-N--SLEETK-AFYADVKSRAADEGRDPSSVRIFPGISPIVADTEEEAEKKYREFAELIPIENAVT------------------------------------------EA-KARNLTLRE-----VAQEM------A----FPRT------LFIGTPERVASLIETWFNAEAADGFIVGSD-----------I-PG-TLDAFVEKVIPILQERGLYRQDYRGGTLRENLGLGIPQ--------
2 PsiBlast_PDB 96.4975% -85 - C4 -1YW1 MOXC_BACSU A:[3-431] --RA------DFIQFGAMIHGVGGTTDGWRHPDVDPSASTNIEFYMKKAQTAEKGLFSFIFIADGLFISEK-------------SI---------P-HFLNRFEPITILSALASVTKNIGLVGTF-S-TSF-TEPFTISRQLMSLDHISGGRAGWNLVTSPQEGAARNHSKSNLPEH--------T---ERYEIAQEHLDVVRGLW-NS-WEHDAFIHNKKTGQFFDQAKLHRLNHKGKYF-QVEG-P-LNIGRSKQ-GEPVVFQAGS-SETGRQFAAKNADAIFTHS-N--SLEETK-AFYADVKSRAADEGRDPSSVRIFPGISPIVADTEEEAEKKYREFAELIPIENAVTYLA--------------------------------------REA-KARNLTLRE-----VAQEM------A----FPRT------LFIGTPERVASLIETWFNAEAADGFIV-GS---D-------I-PG-TLDAFVEKVIPILQERGLYRQDYRGGTLRENLGLGIP---------
3 PsiBlast_PDB 89.9648% -78 - C4 -3SDO ? A:[5-445] MTRK------H-IHFGVLIQGAGANMNAWKHPSVPPDASVNFDFYVDRARRAENAGIAFAFIADSAYVTPK-------------SA---------P-HFLNRFEPISLLSALAVLTSKIGLVGTM-S-SSY-SEPYNVARQFASLDLISGGRAGWNVVTSSIEGTGKNYGRPH-PDH--------A---QRYAIAAEHLDVVQGLW-DS-WDDDALVRDRATGRFFDPDKLHRLDHRGRFF-SVEG-P-LNIRRSPQ-GQPVIFQAGS-SDDGIDLAGRSADAVFSNG-S--TFDEAR-VFYRRVKAAAAAAGRNPDHVKVFPGIGPIVGATQQEADDKYRQVRDLLSPREALAYLSHFFQ--QHDFSVYPLDGPFPDIGTLGSDGFQSTTDNIKRLA-RERKLTLRE-----VAYEV------S----TRRSNIGTSEAFIGTPEAVASEMIRWVDEGAADGFML-GL---P-------V-TGFGLDDFVDHVLPVLSARGYFDPVRRGATLRDHLGLPYKESRYA----
24 HHSearch 87.1747% -77 - C4 -3SDO ? A:[5-445] -MTR------KHIHFGVLIQGAGANMNAWKHPSVPPDASVNFDFYVDRARRAENAGIAFAFIADSAYVTPK-------------SA---------P-HFLNRFEPISLLSALAVLTSKIGLVGTM-S-SSY-SEPYNVARQFASLDLISGGRAGWNVVTSSIEGTGKNYGRP-HPDH--------A---QRYAIAAEHLDVVQGLW-DS-WDDDALVRDRATGRFFDPDKLHRLDHRGRFF-SVEGPL-NIRRSPQ--GQPVIFQAGS-SDDGIDLAGRSADAVFSNG-S--TFDEAR-VFYRRVKAAAAAAGRNPDHVKVFPGIGPIVGATQQEADDKYRQVRDLLSPREALAYLSHFFQ--QHDFSVYPLDGPFPDIGTLGSDGFQSTTDNIKRLA-RERKLTLRE-----VAYEVSTRRSNI----GTSE------AFIGTPEAVASEMIRWVDEGAADGFMLGLP---V-------T-GF-GLDDFVDHVLPVLSARGYFDPVRRGATLRDHLGLPYKESRYA----
5 PsiBlast_PDB 76.7833% -70 - C4 -3B9O ? A:[3-416] --KKIHINAFEMNCVGHIAHGL------WRHPENQRHRYTDLNYWTELAQLLEKGKFDALFLADVVGIYDVYRQSRDTAVREAVQI---------P---VN--DPLMLISAMAYVTKHLAFAVTF-S-TTY-EHPYGHARRMSTLDHLTKGRIAWNVVTSHLPSADKNFGIKKILEH--------D---ERYDLADEYLEVCYKLWEGS-WEDNAVIRDIENNIYTDPSKVHEINHSGKYF-EVPG-P-HLCEPSPQ-RTPVIYQAGM-SERGREFAAKHAECVFLGG-K--DVETLK-FFVDDIRKRAKKYGRNPDHIKMFAGICVIVGKTHDEAMEKLNSFQKYWSLEG---HLAHYGGGTGYDLSKYSSNDY---IGSISVGEIINNMSKL--DG-KWFKLS------------------------------------VGTPKKVADEMQYLVEEAGIDGFNL-VQ---Y-------VSPG-TFVDFIELVVPELQKRGLYRVDYEEGTYREKL--------------
21 PsiBlast_CBE 76.6333% -69 - C4 -3B9O ? B:[3-416] --KKIHINAFEMNCVGHIAHGL------WRHPENQRHRYTDLNYWTELAQLLEKGKFDALFLADVVGIYDVYRQSRDTAVREAVQI---------P---VN--DPLMLISAMAYVTKHLAFAVTF-S-TTY-EHPYGHARRMSTLDHLTKGRIAWNVVTSHLPSADKNFGIKKILEH--------D---ERYDLADEYLEVCYKLWEGS-WEDNAVIRDIENNIYTDPSKVHEINHSGKYF-EVPG-P-HLCEPSPQ-RTPVIYQAGM-SERGREFAAKHAECVFLGG-K--DVETLK-FFVDDIRKRAKKYGRNPDHIKMFAGICVIVGKTHDEAMEKLNSFQKYWSLEG---HLAHYGGGTGYDLSKYSSNDY---IGSISVGEIINNMSKL--DG-KWFKLS------------------------------------VGTPKKVADEMQYLVEEAGIDGFNL-VQ---Y-------VSPG-TFVDFIELVVPELQKRGLYRVDYEEGTYREKL--------------
4 PsiBlast_PDB 76.4733% -73 - C4 -3B9N - ? A:[3-416] --KKIHINAFEMNCVGHIAHGL------WRHPENQRHRYTDLNYWTELAQLLEKGKFDALFLADVVGIYDVYRQSRDTAVREAVQI---------P---VN--DPLMLISAMAYVTKHLAFAVTF-S-TTY-EHPYGHARRMSTLDHLTKGRIAWNVVTSHLPSADKNFGIKKILEH--------D---ERYDLADEYLEVCYKLWEGS-WEDNAVIRDIENNIYTDPSKVHEINHSGKYF-EVPG-P-HLCEPSPQ-RTPVIYQAGM-SERGREFAAKHAECVFLGG-K--DVETLK-FFVDDIRKRAKKYGRNPDHIKMFAGICVIVGKTHDEAMEKLNSFQKYWSLEG---HLAHYGGGTGYDLSKYSSNDY---IGSISVGEIINNMSKL--DG-KWFKLS------------------------------------VGTPKKVADEMQYLVEEAGIDGFNL-VQ---Y-------VSPG-TFVDFIELVVPELQKRGLYRVDYEEGTYREKL--------------
26 HHSearch 74.2734% -71 - C4 -3B9O ? A:[18-420] -----------------------IAHGLWRHPENQRHRYTDLNYWTELAQLLEKGKFDALFLADVVGIYDV-------------YRQSRDTAVREA-VQIPVNDPLMLISAMAYVTKHLAFAVTF-S-TTY-EHPYGHARRMSTLDHLTKGRIAWNVVTSHLPSADKNFGIKKILEH--------D---ERYDLADEYLEVCYKLW-EGSWEDNAVIRDIENNIYTDPSKVHEINHSGKYF-EVPG-P-HLCEPSPQ-RTPVIYQAGM-SERGREFAAKHAECVFLGG-K--DVETLK-FFVDDIRKRAKKYGRNPDHIKMFAGICVIVGKTHDEAMEKLNSFQKYWSLEGHLAHYGGGTG---YDLSKYSSNDYIG-------------------------SISVGE-----IINNM------SKLDGKWFK------LSVGTPKKVADEMQYLVEEAGIDGFNLVQY---V-------S-PG-TFVDFIELVVPELQKRGLYRVDYEEGTYREKLFGKG----------
42 Fugue 62.9521% -70 - C4 -1M41 - SSUD_ECOLI A:[1-361] -----------SLNMFWFLPTHG---DGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGR----------------------------------SCEDAWLVAASMIPVTQRLKFLVAL-R-PSV-TSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDGVF--LDH--------S---ERYEASAEFTQVWRRLL-QR----------------------ETVDFNGKHI-HVRG-AKLLFPAIQQ-PYPPLYFGGS-SDVAQELAAEQVDLYLTWG-E--PPELVK-EKIEQVRAKAAAHGRK---IRFGIRLHVIVRETNDEAWQAAERLISHLLEISPNLW---------------------------------------------------AG-----VGLVR------G----GAGT------ALVGDGPTVAARINEYAALGIDSFVLS-GY---P-------H-LE-EAYRVGELLFPLLDVAIPEIPQPQPL--------------------
27 HHSearch 62.5422% -68 - C4 -3RAO ? A:[18-366] --YF------QGVEYGFWLPIFG----GWLRNVNDESMPPTFEYAKQTAQAAEQLGFSTTLIAELNLNDIK-------------GV------------SAPSLEAWTTAAALAAVTDRLEIMTAV-R-PGF-HNPAVTAKMAANIDQLSNGRFTLNVVSAWWEEEAKQYGGV-FTAH--------D---ERYDRTEEFVTILKGLW-KE----------------------EEFSYKGNFY-ELHH-T-HLSPKPVQKQGIKLYAGGE-SKRGKEVIVNHADAYVMHG-G--TVEEVS-VKIEDMKNRRKKVTEEPL-QSFGLAAYVICRHTEEEALEEWRRITDVK----------------------FVSKSQLE-----------QQV--------KLNDYSVSN-----RGL---------------RP------NLIGTPEQIAERILAFEK-VGVTLLLLQFS---P-------Q-LE-EMKRFSEKVMPLVEAKR-----------------------------
28 HHSearch 61.1020% -69 - C4 -1NQK - SSUD_ECOLI A:[1-359] ----------MSLNMFWFLPTH---GDGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRS----------------------------------CEDAWLVAASMIPVTQRLKFLVAL-R-PSV-TSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDGVF--LDH--------S---ERYEASAEFTQVWRRLL-QR----------------------ETVDFNGKHI-HVRG-A-KLLFPAIQQPYPPLYFGGS-SDVAQELAAEQVDLYLTWG-E--PPELVK-EKIEQVRAKAAAHGRK---IRFGIRLHVIVRETNDEAWQAAERLISHLDD-ETIAKAQAAFA--R-----------------------------------DNLEISPNLWAGVGLVRG------------GAGT------ALVGDGPTVAARINEYAA-LGIDSFVLSGY---P-------H-LE-EAYRVGELLFPLLDVAIPEIPQP-----------------------
31 HHSearch 58.7516% -67 - C4 -1EZW MER_METKA A:[2-348] ----------AEVSFGIELLPDD-----------------KPTKIAHLIKVAEDNGFEYAWICDHYN----------------------------------NYSYMGVLTLAAVITSKIKLGPGI-TNPYT-RHPLITASNIATLDWISGGRAIIGMGPGD-KATFDKMGLP-FPCKIPIWNPEAEDEVGPATAIREVKEVIYQYL-EG----------------------GPVEYEGKYV-KTGT-A-DVKARSIQGSDIPFYMGAQ-GPIMLKTAGEIANGVLVNA-S--NPKDFE-VAVPKIEEGAKEAGRSLDEIDVAAYTCFSIDKDEDKAIEATKIVVAFIVM-GSPDVVLERHG---ID-----TE-KAE--------QIAEAIGKG-DFG-TAIGLVDED-----MIE---------------AF------SIAGDPDTVVDKIEELLK-AGVTQVVVGSPIGPD-------K-EK-AIELVGQEVIPHFK--------------------------------
33 HHSearch 58.1517% -65 - C4 -2I7G ? A:[21-364] -----------GMELGLYTFADVNPNPADG---RGPEGARRLRELLEEIELADQVGLDVFGLGEHHRPDY------------------------------VVSSPSTVLAAAAVKTKNIRLTSAV-SVLSS-DDPVRVFQQFSTVDLLSNGRAEIMAGRGSFIESYPLFGYD----L--------E---DYDVLFAEKLDLLLALR-EQ----------------------EVVTWSGTKHPAING-R-GVYPRPLQ-ERLPVWIAVGGTPQSVARAGAMGLPVALAI-IGGEYRRFA-PLFDLYHEAARRAGQEKTKLRTSINVHGFIADTTDKAADQFYGPQAEVM-----NRIGRER--------GWGPT---N----------R-------------AHFDAAR-----GPE---------------GN------LFLGEPELVAEKIIKAHGVFKNDRFLLQMA---IGLMPHDQI-MR-GIELYGTKVAPLVRKELT----------------------------
36 HHSearch 56.9814% -72 - C4 -2B81 ? A:[20-322] -FAK------DQLTLGVHIPIENYQ-----------FHAPTMEKQVELVQKAEQYGFTGVWLRDVLLQDPD-------------FG---------DPATGQIYDMMIYLTYLASKTEKIAFGTSA-TVLSL-RHPLRVAKEIATLDQLFPERIMLGVSSGDRRADFKALGV----SH--------E---TRGEKFREAFAYLEEIL-YK----------------------NFPSIQSTLG-EVHG-A-NLVPKPSK--RVPTFITGF-SQQNMEWFAEHGDGWMYYP-R--SPVHQA-GAIGQWRELVEDYHPDVFK-PFIQPMHLDLSEDPNERP----------------------------T-----------------------------------------------PIR----------------L------GYRTGRKALIELLDIYKS-IGVNHLFLALF---DGQRP---A-DE-VLDELGEEVLPHFPA-------------------------------
32 HHSearch 56.9615% -74 - C4 -1Z69 MER_METBF A:[1-327] ------------MKFGIEFVPSD-----------------PALKIAYYAKLSEQQGFDHVWITDHYN----------------------------------NRDVYSTLTVLALNTNSIKIGPGV-TNSYT-RNPAITASSIASIAEISGGRAVLGLGPGD-KATFDAMGI----AW--------K---KPLATTKEAIQAIRDFI-SG----------------------KKVSMDGEMI-KFAG-A-KLAFKA---GNIPIYMGAQ-GPKMLELAGEIADGVLINA-S--HPKDFE-VAVEQIKKGAEKAGRDPSEVDVTAYACFSIDKDPVKAVNAAKVVVAFIVA-GSPDLVLERHG---IPVEAK---SQ-----------IGAAIAKG-DFGALMGGLVTPQ-----MIE---------------AF------SICGTPDDCMKRIKDLEA-IGVTQIVAGSPIGPA-------K-EK-AIKLIGKEIIAK----------------------------------
29 HHSearch 55.6013% -65 - C4 -1LUC LUXA_VIBHA A:[1-354] ------------MKFGNFLLTYQPPE---------LSQTEVMKRLVNLGKASEGCGFDTVWLLEHHFTEFG-----------------------------LLGNPYVAAAHLLGATETLNVGTAAIV-LPT-AHPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFRVFGT----DM--------D---NSRALMDCWYDLMKEGF-NE----------------------GYIAADNEHI-KFPK-I-QLNPSAYTQGGAPVYVVAE-SASTTEWAAERGLPMILSWII--NTHEKK-AQLDLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRAKDICRNFLGHWYD-----SYVNATK--IF------------------------------------------------RIDY------------SYEI------NPVGTPEECIAIIQQDIDATGIDNICCGFE---ANGSEEE-I-IA-SMKLFQSDVMPYLKEK------------------------------
30 HHSearch 54.4214% -61 - C4 -1LUC LUXB_VIBHA B:[1-320] ------------MKFGLFFLNFMN-------SK--RSSDQVIEEMLDTAHYVDQLKFDTLAVYENHFSNNG-----------------------------VVGAPLTVAGFLLGMTKNAKVASLN-HVITT-HHPVRVAEEACLLDQMSEGRFAFGFSDCEKSADMRFFNR----PT--------D---SQFQLFSECHKIINDAF-TT----------------------GYCHPNNDFY-SFPK-I-SVNPHAFTEGGPAQFVNAT-SKEVVEWAAKLGLPLVFRWDD--SNAQRK-EYAGLYHEVAQAHGVDVSQVRHKLTLLVNQNVDGEAARAEARVYLEEFV-----RE----SY---SN-TDF------E--------------------------QKMGE-----LL----------------SE------NAIGTYEESTQAARVAIECCGAADLLMSFE---SMEDKAQ-Q-RA-VIDVVNANIV------------------------------------
34 HHSearch 54.0916% -60 * C4 *1RHC ? A:[2-330] -----------KTQIGYFASLEQ----------------YRPMDALEQAIRAEKVGFDSVWVDDHFHPWYH-------------D-------------NAQSAQAWAWMGAALQATKKVFISTCI-TCPIMRYNPAIVAQTFATLRQMYPGRVGVAVGAGEAMNEVPVTGEW--PSV--------P---VRQDMTVEAVKVMRMLW-ES-D--------------------KPVTFKGDYF-TLDK-A-FLYTKPDD--EVPLYFSGM-GPKGAKLAGMYGDHLMTVA-A--APSTLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPDYDKAVEALRFWAGCLV-----PSMFK-YK-------VYDPK-E-----------VQLH----------ANLVHCDT-----IKEN---------------Y------MCATDAEEMIKEIERFKE-AGINHFCLGNSSP-D-------V-NF-GIDIF-KEVIPAVRD-------------------------------