@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0059: (2015-11-28 )
MANVKLFDQTGKEVSSVELNEAIFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVENLSFAAPKTAEFASVLSALSIDSKVLVILEEGNEFAALSARNLPNVTVATATTASVLDIVNADKLLVTKEAISTIEGVLA

Atome Classification :

(20 SA) .........10....-....20........30........40........50-----........60.....-----...70....---....80........90..-.--.....100.......110......---------------.120...-------------....130.......140......-.-150-------------------------.....----.----.---.---.160..-------------------.....170......---------------.180--------------.......----.190---........200.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MANVKLFDQTGKEVS-SVELNEAIFGIEPNESVVFDVVISQRASLRQGTHAV-----KNRSAVSGGGRKPWR-----QKGTGRARQ---GSIRSPQWRGGGVVFGPT-P--RSYGYKLPQKVRRLALKSVYSAKV---------------AEDKFVA-------------VENLSFAAPKTAEFASVLSALSI-D-S---------------------------KVLVI----L----E---E---GNEFAA-------------------LSARNLPNVTVATA---------------TTA---------------SVLDIVN----ADK----LLVTKEAISTIEGVLA
1 PsiBlast_PDB 93.2762% -97 - C2 -3J3V - RL4_BACSU E:[2-207] -PKVALYNQNGSTAG-DIELNASVFGIEPNESVVFDAILMQRASLRQGTHKV-----KNRSEVRGGGRKPWR-----QKGTGRARQ---GSIRSPQWRGGGVVFGPT-P--RSYSYKLPKKVRRLAIKSVLSSKV---------------IDNNIIV-------------LEDLTLDTAKTKEMAAILKGLSV-E-K---------------------------KALIV----T----A---D---ANEAVA-------------------LSARNIPGVTVVEA---------------NGI---------------NVLDVVN----HEK----LLITKAAVEKVEEVLA
23 HHSearch 89.3644%-128 - C2 -1DMG RL4_THEMA A:[1-225] -AQVDLLNVKGEKVG-TLEISDFVFNIDPNYDVMWRYVDMQLS---------------------------------------------------------------------DWSKKLNKKMKKLALRSALSVKY---------------RENKLLV-------------LDDLKLERPKTKSLKEILQNLQL-S-DK--------------------------KTLIV----L----P---WKEEGYMNVK-------------------LSGRNLPDVKVIIADNPNNSKNGEKAVRIDGL---------------NVFDMLK----YDY----LVLTRDMVSKIEEVLG
12 PsiBlast_PDB 87.9041%-129 - C2 -1DMG RL4_THEMA A:[1-225] -AQVDLLNVKGEKVG-TLEISDFVFNIDPNYDVMWRYVDMQLS---------------------------------------------------------------------DWSKKLNKKMKKLALRSALSVKY---------------RENKLLV-------------LDDLKLERPKTKSLKEILQNLQLSD-K---------------------------KTLIV----LPWK-E---E---GYMNVK-------------------LSGRNLPDVKVIIA---------------DNPNNSKNGEKAVRIDGLNVFDMLK----YDY----LVLTRDMVSKIEEVLG
22 HHSearch 86.7963% -71 - C2 -3J3W - RL4_BACSU E:[2-207] -PKVALYNQNGSTAG-DIELNASVFGIEPNESVVFDAILMQRASLRQGTHKV-----KNRSEVRGGGRKPWR-----QKGTGRARQ---GSIRSPQWRGGGVVFGPT-P--RSYSYKLPKKVRRLAIKSVLSSKV---------------IDNNIIV-------------LEDLTLDTAKTKEMAAILKGLSV-E-K---------------------------KALIV----T----A---D---ANEAVA-------------------LSARNIPGVTVVEA---------------NGI---------------NVLDVVN----HEK----LLITKAAVEKVEEVLA
2 PsiBlast_PDB 86.4762% -71 - C2 -3J3W - RL4_BACSU E:[2-207] -PKVALYNQNGSTAG-DIELNASVFGIEPNESVVFDAILMQRASLRQGTHKV-----KNRSEVRGGGRKPWR-----QKGTGRARQ---GSIRSPQWRGGGVVFGPT-P--RSYSYKLPKKVRRLAIKSVLSSKV---------------IDNNIIV-------------LEDLTLDTAKTKEMAAILKGLSV-E-K---------------------------KALIV----T----A---D---ANEAVA-------------------LSARNIPGVTVVEA---------------NGI---------------NVLDVVN----HEK----LLITKAAVEKVEEVLA
24 HHSearch 85.3532% -93 - C2 -3J7Y - RM04_HUMAN F:[67-274] ---ESLRGFEQERVG-LADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKT-----KTRAEVRGGGRKPWP-----QKGTGRARH---GSIRSPLWRGGGVAHGPRGP--TSYYYMLPMKVRALGLKVALTVKL---------------AQDDLHI-------------MDSLELPTGDPQYLTELAHYRRW-G-D---------------------------SVLLV----D----LTHEE---MPQSIV-------------------EATSRLKTFNLIPA---------------VGL---------------NVHSMLK----HQT----LVLTLPTVAFLEDKLL
34 Fugue 84.3536%-122 * C2 *1DMG RL4_THEMA A:[1-225] -AQVDLLNVKGEKVG-TLEISDFVFNIDPNYDVMWRYVDMQLSD---------------------------------------------------------------------WSKKLNKKMKKLALRSALSVKY---------------RE-----NKLLV--------LDDLKLERPKTKSLKEILQNLQL-SDK---------------------------KTLIV----LPWK-E---E---GYMNVK-------------------LSGRNLPDVKVIIA---------------DNPNNSKNGEKAVRIDGLNVFDMLK----YDY----LVLTRDMVSKIEEVLG
36 Fugue 84.0735%-124 - C2 -1DMG RL4_THEMA A:[1-225] -AQVDLLNVKGEKVG-TLEISDFVFNIDPNYDVMWRYVDMQL---------------------------------------------------------------------SDWSKKLNKKMKKLALRSALSVKY---------------RENKLLV-------------LDDLKLERPKTKSLKEILQNLQL-S-D---------------------------KKTLI----VLPWKE---E---GYMNVK-------------------LSGRNLPDVKVIIA---------------DNPNNSKNGEKAVRIDGLNVFDMLK----YDY----LVLTRDMVSKIEEVLG
10 PsiBlast_PDB 80.3543% -92 - C2 -3J8G - ? E:[10-201] --------------S-ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQ-----KTRAEVTGSGKKPWR-----QKGTGRARS---GSIKSPIWRSGGVTFAAR-P--QDHSQKVNKKMYRGALKSILSELV---------------RQDRLIV-------------VEKFSVEAPKTKLLAQKLKDMAL-E-D----------------------------VLII----T----G---E---LDENLF-------------------LAARNLHKVDVRDA---------------TGI---------------DPVSLIA----FDK----VVMTADAVKQVEEMLA
20 PsiBlast_PDB 75.1436% -52 - C2 -4U67 - ? C:[2-193] -AQINVIGQNGGRTI-ELPLPEV------NSGVLHEVVTWQLASRRRGTAST-----RTRAQVSKTGRKMYG-----QKGTGNARH---GDRSVPTFVGGGVAFGPK-P--RSYDYTLPRQVRQLGLAMAIASRQ---------------EGGKLVA-------------VDGFDIADAKTKNFISWAKQNGL-D-G---------------------------TEKVL----L----V---T---DDENTR-------------------RAARNVSWVSVLPV---------------AGV---------------NVYDILR----HDR----LVIDAAALEI------
19 PsiBlast_PDB 74.3536% -44 - C2 -2ZJQ - RL4_DEIRA C:[2-193] -AQINVIGQNGGRTI-ELPLPEV------NSGVLHEVVTWQLASRRRGTAST-----RTRAQVSKTGRKMYG-----QKGTGNARH---GDRSVPTFVGGGVAFGPK-P--RSYDYTLPRQVRQLGLAMAIASRQ---------------EGGKLVA-------------VDGFDIADAKTKNFISWAKQNGL-D-G---------------------------TEKVL----L----V---T---DDENTR-------------------RAARNVSWVSVLPV---------------AGV---------------NVYDILR----HDR----LVIDAAALEIVEE---
26 HHSearch 69.2126% -55 - C2 -2WWB - RL4B_YEAST H:[3-263] RPQVTVHSLTGEATANALPLP-AVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTGRSGQ---GA--FGNMCRGGRMFAPT-KTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHRVEKIPEIPLVV-------------STDLE-SIQKTKEAVAALKAVGA-H-SDLLKVLKSKKLRAGKGKYRNRRWTQRRGPLVV----Y----A-------EDNGIV-------------------KALRNVPGVETANV---------------ASL---------------NLLQLAPGAHLGRF----VIWTEAAFTKLDQVWG
11 PsiBlast_PDB 69.0643% -43 - C2 -5AKA - RL4_ECOLI E:[10-201] --------------S-ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQ-----KTRAEVTGSGKKPWR-----QKGTGRARS---GSIKSPIWRSGGVTFAAR-P--QDHSQKVNKKMYRGALKSILSELV---------------RQDRLIV-------------VEKFSVEAPKTKLLAQKLKDMAL-E-D----------------------------VLII----T----G---E---LDENLF-------------------LAARNLHKVDVRDA---------------TGI---------------DPVSLIA----FDK----VVMTADAVKQVEEMLA
5 PsiBlast_PDB 68.9243% -43 - C2 -3BBX - RL4_ECOLI E:[10-201] --------------S-ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQ-----KTRAEVTGSGKKPWR-----QKGTGRARS---GSIKSPIWRSGGVTFAAR-P--QDHSQKVNKKMYRGALKSILSELV---------------RQDRLIV-------------VEKFSVEAPKTKLLAQKLKDMAL-E-D----------------------------VLII----T----G---E---LDENLF-------------------LAARNLHKVDVRDA---------------TGI---------------DPVSLIA----FDK----VVMTADAVKQVEEMLA
37 Fugue 62.8121% -54 - C2 -1JJ2 - RL4_HALMA C:[1-246] -MQATIYDLDGNTDG-EVDLP-DVFETPVRSDLIGKAVRAAQANRKQ-DYGS-----DEYAGLRTPAESFGS-----GRGQAHVPKLDGRARRVPQAVKGRSAHPPK-TE-KDRSLDLNDKERQLAVRSALAATA---------------DADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDV-H-A---------------------------DIDRADETKI----K---A---GQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATA---------------SEV---------------NTEDLAP----GGAPGRLTVFTESALAEVAER--
4 PsiBlast_PDB 60.1243% 49 - C- -2RDO - RL4_ECOLI E:[10-201] --------------S-ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQ-----KTRAEVTGSGKKPWR-----QKGTGRARS---GSIKSPIWRSGGVTFAAR-P--QDHSQKVNKKMYRGALKSILSELV---------------RQDRLIV-------------VEKFSVEAPKTKLLAQKLKDMAL-E-D----------------------------VLII----T----G---E---LDENLF-------------------LAARNLHKVDVRDA---------------TGI---------------DPVSLIA----FDK----VVMTADAVKQVEEMLA
18 PsiBlast_PDB 59.1136% 81 - C- -1NKW - RL4_DEIRA C:[2-193] -AQINVIGQNGGRTI-ELPLPEV------NSGVLHEVVTWQLASRRRGTAST-----RTRAQVSKTGRKMYG-----QKGTGNARH---GDRSVPTFVGGGVAFGPK-P--RSYDYTLPRQVRQLGLAMAIASRQ---------------EGGKLVA-------------VDGFDIADAKTKNFISWAKQNGL-D-G---------------------------TEKVL----L----V---T---DDENTR-------------------RAARNVSWVSVLPV---------------AGV---------------NVYDILR----HDR----LVIDAAALEIVEE---
17 PsiBlast_PDB 59.1036% 81 - C- -1J5A - RL4_DEIRA K:[2-193] -AQINVIGQNGGRTI-ELPLPEV------NSGVLHEVVTWQLASRRRGTAST-----RTRAQVSKTGRKMYG-----QKGTGNARH---GDRSVPTFVGGGVAFGPK-P--RSYDYTLPRQVRQLGLAMAIASRQ---------------EGGKLVA-------------VDGFDIADAKTKNFISWAKQNGL-D-G---------------------------TEKVL----L----V---T---DDENTR-------------------RAARNVSWVSVLPV---------------AGV---------------NVYDILR----HDR----LVIDAAALEIVEE---
16 PsiBlast_PDB 59.1036% 81 - C- -1K01 - RL4_DEIRA K:[2-193] -AQINVIGQNGGRTI-ELPLPEV------NSGVLHEVVTWQLASRRRGTAST-----RTRAQVSKTGRKMYG-----QKGTGNARH---GDRSVPTFVGGGVAFGPK-P--RSYDYTLPRQVRQLGLAMAIASRQ---------------EGGKLVA-------------VDGFDIADAKTKNFISWAKQNGL-D-G---------------------------TEKVL----L----V---T---DDENTR-------------------RAARNVSWVSVLPV---------------AGV---------------NVYDILR----HDR----LVIDAAALEIVEE---
15 PsiBlast_PDB 59.1036% 81 - C- -1JZZ - RL4_DEIRA K:[2-193] -AQINVIGQNGGRTI-ELPLPEV------NSGVLHEVVTWQLASRRRGTAST-----RTRAQVSKTGRKMYG-----QKGTGNARH---GDRSVPTFVGGGVAFGPK-P--RSYDYTLPRQVRQLGLAMAIASRQ---------------EGGKLVA-------------VDGFDIADAKTKNFISWAKQNGL-D-G---------------------------TEKVL----L----V---T---DDENTR-------------------RAARNVSWVSVLPV---------------AGV---------------NVYDILR----HDR----LVIDAAALEIVEE---