@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1212: (2015-12-06 )
MLTLFTHINSFVWGPPLLALLVGTGIYLSFRLGFIQLRQLSRAFKLIFREDNGQGDISSYAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGLLAIKYRTKDTNGEISGGPMYYIVNGMGQKWKPLAVFFSAAGILVALLGIGTFTQVNAIASALEHTFKISTRFTSLILAVIVLFIIFGGIKSISKVSEKIVPFMAISYILATLIIIAVNYNKIPHTFQLIFSGAFSGTAAIGGFSGAIVKEAIQKGIARGVFSNESGLGSAPIAAAAAKTKEPVEQGLISMTGTFIDTIVICTLTGIAILVTGKWLEFDLQGAPLTQASFNTVFGSLGSFALTFCLVLFAFTTILGWSYYGERCFEYLFGTKFINAYRIIFVIMVGLGGFLQLDLIWVIADIVNGLMALPNLIALLVLSPIIVKETQKYFSETKNITKP

Atome Classification :

(20 SA) -----------------------.......------..10........20........30........---40........50........60........70...---....------.80........90.......----.100-....-------------------...110.--......---120.....-..130.....--..140.-----------------------------.-......150----...------------------------------------------....-------.160.-----......170...--....--.---180-.........-----------190.-----.......200.......210-----.--------.....-------.-------220------------.---------..-....230-----.-......----.240.......250..---------------....--------------.260..--.-----..------------..270.-......280.......290----------------.......-----.300--.----..-----...---.310..------.-----....-320..----------.---....330....-------------...340..-.....350.......360..--------------------------....-.370.......380...-....390-----.........400....-------...410.......420---------------.........430-----.........440-------------.......-----------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----------------------MLTLFTH------INSFVWGPPLLALLVGTGIYLSFRLGFIQLRQ---LSRAFKLIFREDNGQGDISSYAALATALAATVGTG---NIVG------VATAIKSGGPGALFWMWVAA----FFGM-ATKY-------------------AEGLLAI--KYRTKD---TNGEISGG-PMYYIVNGMG--QKW-KP-----------------------------L-AVFFSAAG-----ILV------------------------------------------ALLG-------IGTFT-----QVNAIASA-LEH--TFKI--S---T---RFTSLILAV-----------IV-L-----FIIFGGIKSISKVSEKIVPF-----M--------AISYI-------L-------ATL------------I---------II-AVNYNK------I-PHTFQL----IFSGAFSGTAAIGGFS---------------GAIV--------------KEAIQK--G-----IA------------RGVFSN-ESGLGSAPIAAAAAKTKE-----------------PVEQGLI-----SMTG--T----FI-----DTI---VICTLT------G-----IAIL-VTGKW----------L---EFDLQGAPLTQ-------------ASFNTVFG-SLGSFALTFCLVLFAFTTIL--------------------------GWSY-YGERCFEYLFGTKFINA-YRIIF-------VIMVGLGGFLQLDLIW-------VIADIVNGLMALPN-----------------LIALLVLSPI-------IVKETQKYFSE--------------TKNITKP-----------------------------------------------------------
119 Fugue 77.2816%-116 - C9 -4GUA POLN_SINDV A:[7-668] -------------------------NPFSC------KTNVCWAKALEPILATAGIVLT--------------GCQWSELFPQFADDKPHSAIYALDVICIKFFGMD---LTSGLFSKQSIPLTYHPADSARPVAHWDNS----PGTR-KYGY-------------------DHAIAAE--LSRRFP---VFQLAGKG-TQLDLQTGRT--RVI-SAQHNLVPVNRNLPHALVPEYKEKQPGPVKKF-LNQFKHHS-----VLVVSEEKIEAPRKRIEWIAPIGIAGADKNYNLAFGFPPQARYDLVFIN-------IGTKY-----RNHHFQQC-EDH--AATL--K---T---LSRSALNCL-----------NPGG-----TLVVKSYGYADRNSEDVVTA-----L--------ARKFV-------R-------VSAARPDCVSSNTEMY---------LI-FRQLDNSRTRQFT-PHHLNC----VISSVYEGTRDGVGAAPSYRTKRENIADCQEEAVV--------------NAANPL--GRPGEGVC------------RAIYKRWPTSFTDSATETGTARMTVCLGKKVIHAVGPDFRKHPEAEALK-----LLQN--A----YH-----AVA---DLVNEH------NIKSVAIPLL-STGIYAAGKDRLEVSL---NCLTTALDRTD-------------ADV-TIYC-LDKKWKERIDAALQLKESVTELKDEDMEIDDELVWIHPDSCLKGRKGFST-TKGKLYSYFEGTKFHQA-AKDMA-------EIKVLFPNDQESNEQL-------CAYILGETMEAIREKCPVDHNPSSSPPKTLPCLCMYAMTPE-------RVHRLRSNNVKEVTVCSSTPLPKHKIKNVQKVQCTKVVLFNPHTPAFVPARKYI-------------------------------------
120 Fugue 70.9916%-111 - C6 -4WWX RAG1_MOUSE B:[1-618] APRQHLLSLTRRAQKHRLRELKIQVKEFADKEEGGDVKAVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFL-SCSQYHKMYRTVKAITGRQIFQPLHA------LRNAEKVLLPGYHPFEWQPP----LKNV-SSRT-------------------DVG---------IID---GLSGLASS-VDEYPVDTIA--KRF-RY-----------------------------D-SALVSALMDMEEDILE------------------------------------------GMRSQDLDDYLNGPFTVVVKESCDGMGDV-SEK--VPEK--A---V---RFSFTVMRI-----------TI-EHGSQNVKVFEEPKPNSELCCKPLCL-----MLADESDHETLTAI-------L-------SPL------------IAEREAMKSSEL-TLEMGG------I-PRTFKF----IFRGTGYDEKLVREVE---------------GLEASGSVYICTLCDTTRLEASQN--L-----VF------------HSITRS-HAENLQRYEVWRSNPYHE-----------------SVEELRD-----RVKG--VSAKPFI-----ETV---PSIDAL------H-----CDIG-NAAEF----------Y---KIFQLEIGEVY-------------KHPNASKE-ERKRWQATLDKHLRKRMNLK--------------------------PIMR-MNGNFARKLMTQETVDA-VCELIPSEERHEALRELMDLYLKMKPVWRSSCPAKECPESLCQYSFNSQ-----------------RFAELLSTKFKYRYEGKITNYFHKTLAH--------------VPEIIERDGSIGAWASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNA
122 Fugue 67.4915%-123 - C7 -2P4E PCSK9_HUMAN A:[153-682] -------------------SIPWNLERITP------PRYRAGGSLVEVYLLDTSIQSDHR------EI---EGRVMVTDFENVPEEDQASKCDSHGTHLAGVVS-G---RDAG------VAKGA------SMRSLRVLN----CQGK-GT-V-------------------SGTLIGL--EFIRKS---QLVQPVGP-LVVLLPLAGGYSRVL-NA-----------------------------A-CQRLARAG-----VVL------------------------------------------VTAA-------GNFRD-----DACLYSPASAPE--VITV--G---A---TNAQDQPVTLGTLGTNFGRCVD-L-----FAPGEDIIGASSDCSTCFVSQSGTSQ--------AAAHV-------A-------GIA------------A---------MM-LSAEPE------LTLAELRQ----RLIHFSAKDVINEAWF---------------PEDQ--------------RVLTPN--L-----VAALPPSTHWQLFCRTVWSA-HSGPTRMATAIARCAPDE-----------------ELLSCSSFSRSGKRRG--E----RM-----EAQGGKLVCRAHNAFGGEG-----VYAI-ARCCL----------LPQANCSVHTAPPAE-------------ASMGTRVHCHQQGHVLTGCSSHWEVEDLG--------------------------PNQC-VGHREASIHASCCHAPG-LECKV-------KEHGIPAPQEQVTVAC-------EEGWTLTGCSALPG-------------------TSHVLGAY-------AVDNTCVVRSR--------------SEEAVTAVAICCRSR---------------------------------------------------
126 Fugue 67.4819%-108 - C4 -4USR ? A:[1-357] --------------------------------------GPAMPPILDVIVIGGGQAALTTAYFLRRTS---LS---YLLLDEQPGPGGAWLHAWDSLRLFSPAAWS---SIAGWP----MPSPTEPGNPT------RND----VIDY-LRRY-------------------EDRYQFP--IQRPVR---VDTVTRLD-DLWRVQAG-D--QQW-LA-----------------------------R-AVI-SATG-----TWS------------------------------------------KPF--------IPPYE-----GRELFQGA-QIH--SAHY--R---T---PAPFAGKRV-----------MV-V---------GGGNSGAQVLAELSSV-----S--------ETLWITQEPPAFL-------PDE------------V---------DG-RVLFER------A-TARWKA----QQEGR-SIDEPAGGFG---------------DIVM--------------VPPVRE--A-----RE------------RGVLVA-ERPFARFT-----------------------------ETGVE-----WADGRRE----NL-----DAV---IWCSGF------R-----PA------------------------------LDH-------------LRELGVVE-ADGKVQVE-----------------------------------------------------DTRVVKQ-PNLWL-------V---GYGDWTG---------------------MASAT-----------------LIGVTRTARS-------TADQVVQALTA--------------TP----------------------------------------------------------------
124 Fugue 62.8317%-127 - C8 -4X2Z A:[9-309] -----------------------QKTIYLT------EDGVKY----------RSIVLKPGDSLGQFGQ---VYAKNKIVFTADD------------------VEDK---EILY------VPTT----------DKSILE----YYGLDAQKY-------------------VIYLQTLAQKWNVQY---RDN--------FLILE-------W-RD-----------------------------G-NCWISSAI-----VLL------------------------------------------QAAK-------I-------------------------------------RFKGFLTEA-----------WA-K-----LL-----------GGDPTDF-----V--------AWCYA-------S-------CTA------------K---------VG---DFSD------A-NWLLAN----LAEH-FDAD-----YT---------------NAFL--------------KKRVSCNCG-----IK------------SYELRG-LEAC-IQPVRATNLLHFK-----------------TQYSNCP-----TCGA--N----NT-----DEV---IEASLP------Y-----LLLF-ATDGP----------A---TVDCDEDAVGT-------------VVFV---G-STNS--------GHCYTQAA--------------------------GQAFDNLAKDRKFGKKSPYITAMYT-------------------------------------------------------------------------------------RFAFKNE--------------TS----------------------------------------------------------------
109 HHSearch 62.4016%-105 - C11 -3L1L ADIC_ECO57 A:[7-308] -------------------------------------------------------------------------------------AHKVGLIPVTLMVSGAIMGSG---VFLL------PANLASTGG-IAIYGWLVTI----IGAL-GLSM-------------------VYAKMSF--LDPS----------PGG-SYAYARRCFG--PFL-GY-----------------------------QTNVLYWLAC-----W-------------------------------------------------------IGNIA-----MVVIGVGY-LSY--FFPILKD---PWVLTITCVVVLW-----------IF-V-----LLNIVGPKMITRVQAVATVL-----A--------LIPIV-------G-------IAV------------F---------GWFWFRGET------Y-MA---------------------A--------------------------------------IQS--T-----LN------------VTLWSF----IGVESASVAAGVVKN-----------------PKRNVPI-----ATIG--G----VL-----IAA---VCYVLS------T-----TAIMGMIPNA----------A---LRV-SASPFG--------------DAARMALG-DTAGAIVSFCAAAGCLGSLG--------------------------GWTL-LAGQTAKAAADDGLFPP-IFARV-------NKAGTPVAGLIIVGIL-------MTIFQLSSISPNAT-----------------KEFGLVSSVS-------VIFTLVPYLYT--------------CAALLLL-----------------------------------------------------------
121 Fugue 58.8113%-118 * C12 *4LCT CSN1_ARATH A:[1-318] ----------------------EPLDIEAY------AALYK-GRTKIMRLLFIANHCGG-----NHAL---QFDALRMAYDEIKKGENTQLFREVVNKIGNR-----------------------LGEKYGMDLAWCEA----VDRR-AEQK-------------------KVKLENE--LSSYRT---NL-----------IKESIR--MGY-ND-----------------------------F-GDFYYACG---------------------------------------------------------------MLG-----DAFKNYIR-TRD--YCTT--T---K---HIIHMCMNA-----------IL-V-----SIEMGQFTHVTSYVNKAEQ---------------------------------------------------------------------------N-PETLEP----MVNAKLRCASGLAHLE---------------LKKY--------------KLAARK--F-----L-------------------------------------------------------DVNPELG-----NSYN--E----VI-----APQ---DIATYG------G-----LCAL-AS--------------------FDRSELKQ-------------KVIDN-----------------INFRNFL--------------------------ELVP-DVRELINDFYSSR-----YASCL-------EYLASLKSNLLLDIHL--------------------H-----------------DHVDTLYDQI-------RKKALIQYTLP--------------------------------------------------------------------------------
108 HHSearch 56.1213%-102 - C11 -3GIA Y609_METJA A:[3-306] -----------------------------------------------------------------------------------LKNKKLSLWEAVSMAVGVMIGAS---IFSI------FGVGAKIAGRNLPETFILSG----IYAL-LVAY-------------------SYTKLGA--KIVS----------NAG-PIAFIHKAIG--DNIITG-----------------------------ALSILLWMSY-----V-------------------------------------------------------ISIAL-----FAKGFAGY-FLP--LINAPINTFNI---AITEIGIVA-----------FF-T-----ALNFFGSKAVGRAEFFIVLV-----K--------LLILG-------L-------FIF------------A---------GLITIHPSY------V-IPDL------------APSA-VSGM--------------------------------------IF--A-----SA------------IFFLSY----MGFGVITNASEHIEN-----------------PKKNVPR-----AIFI--S----IL-----IVM---FVYVGV------A-----ISAIGNLPID----------E---LIKASENALA--------------VAAKPFLG-NLGFLLISIGALFSISSAMN--------------------------ATIY-GGANVAYSLAKDGELPE-FFERK-------VWFKSTEGLYITSALG-------VLFALLFNMEGVAS-----------------ITSAVFMVIY-------LFVILSHYILI--------------DEVGGRK-----------------------------------------------------------
118 Fugue 53.3816%-100 - C2 -2B2A - TERT_TETTH A:[13-191] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLT-----RKEDLLTV-LKQISALKY--V---S---NLYEFLLAT------------------------EKIVQTSELDTQFQEF-----L--------TTT------------------------------------------II-ASEQNL------V-ENYKQM----TIKQVIDDSIILLGNK---------------QNYV--------------QQIGTT--T-----IG------------FYVEYR-QT-LYSSNFRNLLNIF-----------------------GEE-----DFKY--F----LI-----DFL---VFTKVEQ-----N-----GYLQ-VAGVC----------L---NQYFSVQVKQK-------------KWYKNN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
127 Fugue 52.698%-108 - C5 -2AJT - ARAA_ECOLI A:[1-498] -----------------------MTIFDNY------EVWFVIGSQHL---YGPETLRQVTQHAEHVVN---ALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDD---PCAG------LVVWLHTFSPAKMWINGLTMLNKPLLQF-HTQFNAALPWDSIDMDFMNLNQTAHGGREF--GFIGARMRQQHAVVTGHWQDKQAHERIG--SWM-RQ-----------------------------A-VSKQDTRH-----LKV------------------------------------------CRFG-------DNMRE-----VAVTDGDK-VAA--QIKF--G---F---SVNTWAVGD-----------LV-Q-----VVNSISDGDVNALVDEYESC-----Y--------TMTPA-------TQIHGEKRQNV------------L---------EA-ARIELG------M-KRFLEQGGFHAFTTTFEDLHGLKQLP---------------GLAV--------------QRLMQQ--G-----Y---------------GFAG-EGDWKTAALLRIMKVMST-----------------GLQGGTS-----FMED--Y----TYHFEKGNDL---VLGSHM------L-----EVCP-SIAVE----------E---KPILDVQHLGIGGKDDPARLIFNTQTGPAIVA-SLIDLGDRYRLLVNCIDTVK--------------------------TPHS-LPKLPVANALWKAQPDL-PTASE-------AWILAGGAHHTVFSHA-------LNLNDMRQFAEMHD-----------------IEITVIDNDT-------RLPAFKDALRW--------------NEVYYGF-----------------------------------------------------------
36 PsiBlast_CBE 43.8839% 111 - C13 -4DWV ADH1E_HORSE B:[318-365] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFGGFKSKDSVPKLVADF-----M--------AKKFA-------L-------DPL------------I---------TH-VLPFEK------I-NEGFDL----LRSGESIRTILTF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
53 PsiBlast_CBE 43.7939% 115 - C13 -1N92 ADH1E_HORSE A:[318-365] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFGGFKSKDSVPKLVADF-----M--------AKKFA-------L-------DPL------------I---------TH-VLPFEK------I-NEGFDL----LRSGESIRTILTF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
90 PsiBlast_CBE 43.7639% 112 - C13 -5CDU ? B:[318-365] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFGGFKSKDSVPKLVADF-----M--------AKKFA-------L-------DPL------------I---------TH-VLPFEK------I-NEGFDL----LRSGESIRTILTF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
92 PsiBlast_CBE 43.6739% 111 - C13 -5CDT ? B:[318-365] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFGGFKSKDSVPKLVADF-----M--------AKKFA-------L-------DPL------------I---------TH-VLPFEK------I-NEGFDL----LRSGESIRTILTF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50 PsiBlast_CBE 43.6539% 113 - C13 -1P1R ADH1E_HORSE B:[318-365] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFGGFKSKDSVPKLVADF-----M--------AKKFA-------L-------DPL------------I---------TH-VLPFEK------I-NEGFDL----LRSGESIRTILTF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 43.6539% 116 - C13 -1BTO ADH1E_HORSE A:[318-365] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFGGFKSKDSVPKLVADF-----M--------AKKFA-------L-------DPL------------I---------TH-VLPFEK------I-NEGFDL----LRSGESIRTILTF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
62 PsiBlast_CBE 43.5839% 114 - C13 -1LDY ADH1E_HORSE B:[318-365] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFGGFKSKDSVPKLVADF-----M--------AKKFA-------L-------DPL------------I---------TH-VLPFEK------I-NEGFDL----LRSGESIRTILTF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
80 PsiBlast_CBE 43.5739% 114 - C13 -4NFS ADH1E_HORSE B:[318-365] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFGGFKSKDSVPKLVADF-----M--------AKKFA-------L-------DPL------------I---------TH-VLPFEK------I-NEGFDL----LRSGESIRTILTF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 43.5739% 118 - C13 -1QV7 ADH1E_HORSE B:[318-365] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFGGFKSKDSVPKLVADF-----M--------AKKFA-------L-------DPL------------I---------TH-VLPFEK------I-NEGFDL----LRSGESIRTILTF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 PsiBlast_CBE 43.5339% 111 - C13 -5CDS ? B:[318-365] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFGGFKSKDSVPKLVADF-----M--------AKKFA-------L-------DPL------------I---------TH-VLPFEK------I-NEGFDL----LRSGESIRTILTF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------