@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu05740: (2016-06-09 )
MKKFPKKLLPIAVLSSIAFSSLASGSVPEASAQEKKKGNQDEIKNVIVLIGDGMGVSYTSAYRYLKDNKKTKVVEPTAFDQYLVGQQTTYPDDPEQNVTDSAAAATAMSAGIKTYNNAIAVDNDGSEAKTVLEAAKEKGKATGLVATSEITHATPASFGSHDHSRKNMNSIADDYFDEMVNGKHKIDVLLGGGKSNFDRKDRNLIKEFKKAGYSYVDDRKDMLKNKDSQVLGLFADGGLPKKIDRTKDIPSLKDMTNTAIKKLNKDKDGFFLMVEGSQIDWAGHDNDIVGAMSEMEDFEQAYKAAIDFAKKDKHTLVVATADHSTGGYSIGADGIYNWFSEPIKAAKRTPDFMAEKIADGADVEKTLKTYIDQKKLALTKAEIQSVEEAAKSKEVLDIDNAIENIFNKRSHTGWTTGGHTGEDVPVYAYGPSSETFAGQIDNTEIAKNVFKALQYNIKINDK

Atome Classification :

(30 SA) .........10........20........30........40........50........60.......------.70--------.---------.-------.--.--.--...-.80.----..-...-..90...----.--....100.......110.......120...----------.------------.---...130.......140.......150.......160......---------------.-------------------170---------------..---------------.--------------.----...180--..----------..--------------------...190.....---------------------------..200-----.----------------------------..---.....--.------210....----...-.220----...----.----.----..230...-----.-...240-----------.-----------------------.-----------.----------------------.-------..-------.250.......260...---...---.270.......280.......290.......300.......310-.......320.....-----------------------------..330--------------------------------.----..-------------------------.-----------------.--.-----------------.-----.-------340-...-...--..350......-------.-----360-----......---...370..--------.--..-..380-------........-390----------------------.........------------400.......410.----......420.......430..--...--..440.......450.......460
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MKKFPKKLLPIAVLSSIAFSSLASGSVPEASAQEKKKGNQDEIKNVIVLIGDGMGVSYTSAYRYLKDN------KK---------T---------K-------V--V--E--PTA-FDQY----LV-GQQ-TTYPDDP----E--QNVTDSAAAATAMSAGIKTYNNAIA-VDND----------G------------S---EAKTVLEAAKEKGKATGLVATSEITHATPASFGSHDHSRKNM---------------N-------------------SIA---------------DD---------------Y--------------F----DEMVNG--KH----------KI--------------------DVLLGGGKSNF---------------------------DRK-------D----------------------------RN---LIKEF--K------K-AGYSY----VDD-RKDM----LKN----K----D----SQVLGLFA-----D-GGLPKK-----------I-----------------------D-----------R----------------------T-------KD-------IPSLKDMTNTAIKKLNK---DKD---GFFLMVEGSQIDWAGHDNDIVGAMSEMEDFEQAYKAAIDFAKKD-KHTLVVATADHSTGG-----------------------------YSIG---------------------------------A----DG-------------------------I-----------------Y--N-----------------W-----F-------SE--PIK-AAK--RTPDFMAEKIA-------D-----G-------ADVEKT---LKTYIDQK--------K--LA-LTKA--------EIQSVEEA-A------------------------KSKEVLDID------------NAIENIFNKRSHTG----WTTGGHTGEDVPVYAYGPSSE--TFA--GQIDNTEIAKNVFKALQYNIKINDK
115 HHSearch 95.9841% -63 - C6 -3A52 ? A:[1-399] -------------------------------------------MGMIIMVGDGMGPAYTSAYRYFQDN------PD---------T---------E-------E--I--E--QTV-FDRL----LV--GMASTYPARE----S--GYVTDSAASATALATGFKSYNGAIA-VDIN----------K------------R---PLTTIMQMAKARGMSTGVAVTAQVNHATPAAFLTHNESRKNY---------------E-------------------AIA---------------AD---------------M--------------L----KS------------------DA--------------------DVILGGGRKYF---------------------------SEA-----------------------------------------LVSQF--S------A-KGYQH----ITE-LAQL----DSI----T----Q----PKVLGLFA-----E-VQLPWV-----------I-----------------------D-----------D------------------------------TD-------ANTLSKLTQKSLDLLSQ---NEK---GFVLLVEGSLIDWAGHNNDIATAMAEMQGFANAIEVVEQYIRQH-PDTLLVVTADHNTGG-----------------------------LSIG---------------------------------A----NG-------------------------E-----------------Y--Q-----------------W-----D-------T---KLPKGIS--ASPASIATHAI-------A-----A-------DDWQAG---VNQQLG-------------FD-VNST--------ELQQLTNA-R------------------------MQ-GKSTLE------------VALKKIIDTRSYTG----WTTSGHTGVDVQVFAMGPAAD--LFK--GNQDNTHIAEKMMSLLPKV------
1 PsiBlast_PDB 95.5141% -63 - C6 -3A52 ? A:[3-396] ---------------------------------------------MIIMVGDGMGPAYTSAYRYFQDN------PD---------T---------E-------E--I--E--QTV-FDRL----LV-GMA-STYPARE----S--GYVTDSAASATALATGFKSYNGAIA-VDIN----------K------------R---PLTTIMQMAKARGMSTGVAVTAQVNHATPAAFLTHNESRKNY---------------E-------------------AIA---------------AD---------------M--------------L------------KS----------DA--------------------DVILGGGRKYF---------------------------SEA-----------------------------------------LVSQF--S------A-KGYQH----ITE-LAQL----DSI----T----Q----PKVLGLFA-----E-VQLPWV-----------I-----------------------D-----------D----------------------T--------D-------ANTLSKLTQKSLDLLSQ---NEK---GFVLLVEGSLIDWAGHNNDIATAMAEMQGFANAIEVVEQYIRQH-PDTLLVVTADHNTGG-----------------------------LSIG---------------------------------A----NG-------------------------E-----------------Y--Q-----------------W-----D-------TK--LPK-GIS--ASPASIATHAI-------A-----A-------DDWQAG---VN---QQL--------G--FD-VNST--------ELQQLTNARM------------------------QGKSTLEV--------------ALKKIIDTRSYTG----WTTSGHTGVDVQVFAMGPAAD--LFK--GNQDNTHIAEKMMSLL---------
21 PsiBlast_CBE 95.1241% -65 - C6 -3A52 ? B:[3-396] ---------------------------------------------MIIMVGDGMGPAYTSAYRYFQDN------PD---------T---------E-------E--I--E--QTV-FDRL----LV-GMA-STYPARE----S--GYVTDSAASATALATGFKSYNGAIA-VDIN----------K------------R---PLTTIMQMAKARGMSTGVAVTAQVNHATPAAFLTHNESRKNY---------------E-------------------AIA---------------AD---------------M--------------L------------KS----------DA--------------------DVILGGGRKYF---------------------------SEA-----------------------------------------LVSQF--S------A-KGYQH----ITE-LAQL----DSI----T----Q----PKVLGLFA-----E-VQLPWV-----------I-----------------------D-----------D----------------------T--------D-------ANTLSKLTQKSLDLLSQ---NEK---GFVLLVEGSLIDWAGHNNDIATAMAEMQGFANAIEVVEQYIRQH-PDTLLVVTADHNTGG-----------------------------LSIG---------------------------------A----NG-------------------------E-----------------Y--Q-----------------W-----D-------TK--LPK-GIS--ASPASIATHAI-------A-----A-------DDWQAG---VN---QQL--------G--FD-VNST--------ELQQLTNARM------------------------QGKSTLEV--------------ALKKIIDTRSYTG----WTTSGHTGVDVQVFAMGPAAD--LFK--GNQDNTHIAEKMMSLL---------
111 HHSearch 88.9134% -53 - C6 -3E2D ? A:[2-502] -----------------------------------------EIKNVILMIGDGMGPQQVGLLETYANQ------AP---------N---------SIYK----GNKT--A--IYQ-LAQE----GV-IGSSLTHPE------D--AIVVDSACSATMLATGIYSSSEVIG-IDSQ----------G------------N---HVETVLEKAKKAGKATGLVSDTRLTHATPASFAAHQPHRSLE---------------N-------------------QIA---------------SD---------------M--------------L----AT------------------GA--------------------DVMLSGGLRHW---------------------------IPK-------STNDKGETYKQLEKLTQGDVYLKSKRKDDRN---LLTEA--E------K-DGYQL----AFN-RNML----DDA----K----G----DKLLGLFA-----Y-SGMDDG-----------I-----------------------A-----------Y----------------------SNKKKSGERT-------QPSLKEMTQKALNILSK---DED---GFFLMVEGGQIDWAGHSNDAGTMLHELLKFDEAIQTVYEWAKDR-EDTIVIVTADHETGS-----------------------------FGFS---------------------------------Y----SS-------------------------NDLPKPQKRSGEAFADRDYAPN-----------------FNFGAFDI------LD--GLY-NQK--QSYYGMISEFQ-------K-----LDKSLQTPEKLAEI---VNKNSE-------------FP-ITAE--------QAKNVLAS-KPNPYRLAQHKYLSAEEVPAINDFDAFFPYNDRG------------NLLAREQATGQNIV----WGTGTHTHTPVNVFAWGPAEKILPVS--KIMHHSELGEYIKQQVN--------
112 HHSearch 88.7636% -44 - C6 -2X98 ? A:[2-429] ----------------------------------------SPAANAIAYIVDGMGQTQISAARYLNAY------KT---------APERFPLNVSP-------A--E--T--PTG-FDAF----SS-RGSMTTFPD------DPYETTTDSAAAATAFASGVKTYNGAIG-GVQTSGGG------F------------Q---RVDTVLERASAQGYATGLITTTEATHATPAAFAAHVEDRGNQ---------------T-------------------EIA---------------RQ---------------Y--------------I----EE-------T----------QP--------------------DVILGGQRRDF---------------------------EAD-------ASNG-------------------------GT---LVDAA--R------D-NGYTI----AET-AAEL----DAV----D----D----PPVLGLFS-----QESHLDYY-----------L-----------------------D-----------R----------------------KNDPE---NT-------QPNLDAMVDAGVDLLSSAGDPDK---GFFLLVESGRVDHAGHANYPAQ-VAEQYEATQVAGQLVEYAETTAEPTFLVSTGDHECGG-----------------------------LTLG---------------------------------R----DS-------------------------P-----------------Y--E-----------------V-----E-------YD--VLA-AQK--ATTSRLRDLLA-------G-----VRSA----DELESI---VAAHTG-------------ITALTDR--------EVAKLR----------------------------------DAP------------GSISTILAERAGIA----FTTDGHTGTDVPVFAHGPNAA--RFD--AARDNTAVADALAAALGVS------
113 HHSearch 88.6932% -54 - C6 -3WBH ? A:[31-527] -----------------------------------------EVKNVILMIGDGMGPQQVGLLETYANQ------AP---------D---------SI------Y--D--G--EPTAFHQLAKE-GV-VGFSLTHPE------D--AVVVDSACSATQLASGIYSGSEVIG-IDAE----------G------------N---PVETVLELAQARGKATGLVSDTRLTHATPAAFAAHQPHRSLE---------------N-------------------EIA---------------VD---------------M--------------L----EV------------------GP--------------------DVMLSGGLRHW---------------------------VPQ-------SASEDAEVTSLMDGAYEPASKRQDD----RN---LLAEA--V------E-KGYGL----AFS-REQL----EAD----Q----S----DKLLGLFA-----N-SGMADG-----------I-----------------------E-----------Y----------------------RNTRDDADRR-------EPTLHEMTQAALNRLEQ---DED---GFFLMVEGGQIDWAGHSNDAGTMLNEMVKFEEAVQGVYDWAKGR-EDTVILVTADHETGA-----------------------------FGLS---------------------------------Y----SS-------------------------AD----------------L--PEPQSKSGPAFAERDYAPN-----FNFGDFALLD--SLY-HQK--ASFSTLLSEFG-------ALEEEQRTP-----ARLMEM---VNANSD-------------FQ-IDEE--------QAEAVLAD-KPNPYHVEGHSYLEAEEVPAIQDFDAFYPYNDRG------------NVLGRVLGTAQNVV----WGTGTHTHTPVNVFAWGPAETILPVS--SIQHHSEVGQYLKSLVE--------
2 PsiBlast_PDB 86.9630% -46 - C6 -3WBH ? A:[31-503] -----------------------------------------EVKNVILMIGDGMGPQQVGLLETYANQ------AP---------D---------S-------I--YDGE--PTA-FHQLAKEGVV-GFS-LTHPED--------AVVVDSACSATQLASGIYSGSEVIG-IDAE----------G------------N---PVETVLELAQARGKATGLVSDTRLTHATPAAFAAHQPHRSLE---------------N-------------------EIA---------------VD---------------M--------------LEVGPDVMLSGGLRHWVPQSASEDAEV--------------------TSLMDGAYEPA---------------------------SKRQD-----D----------------------------RN---LLAEA--V------E-KGYGL----AFS-REQL----EAD----Q----S----DKLLGLFA-----N-SGMADG-----------IEYRNTRD----------------D-----------A----------------------D-------RR-------EPTLHEMTQAALNRLEQ---DED---GFFLMVEGGQIDWAGHSNDAGTMLNEMVKFEEAVQGVYDWAKGR-EDTVILVTADHETGA-----------------------------FGLSYSSADLPEPQSKSGPAFAERDYAPNFNFGDFALL----DS-------------------------L-----------------Y--HQKASFST----------L-----L-------SEFGALE-EEQ--RTPARLMEMVN-------A-----N-------SDFQ---------IDEE--------Q--AE-AVLADKPNPYHVEGHSYLEA-E------------------------EVPAIQDFDAFYPYNDRG---NVLGRVLGTAQNVV----WGTGTHTHTPVNVFAWGPA----------------------------------
103 Fugue 86.6534% -47 - C6 -3E2D ? A:[1-502] ----------------------------------------AEIKNVILMIGDGMGPQQVGLLETYANQAPNSIYKG---------N---------K-------T--A--I--YQL-AQEG----VI-GSS-LTHPEDA----I----VVDSACSATMLATGIYSSSEVIG-IDSQ----------G------------N---HVETVLEKAKKAGKATGLVSDTRLTHATPASFAAHQPHRSLE---------------N-------------------QIA---------------SD---------------M--------------L----AT------------------GA--------------------DVMLSGGLRHWIPKSTNDKGETYKQLEKLTQGDVYLKSKRK-------DD---------------------------RN---LLTEA--E------K-DGYQL----AFN-RNML----DDA----K----G----DKLLGLFA-----Y-SGMDDG-----------I-----------------------A-----------Y----------------------S-------NKKKSGERTQPSLKEMTQKALNILSK---DED---GFFLMVEGGQIDWAGHSNDAGTMLHELLKFDEAIQTVYEWAKDR-EDTIVIVTADHETGS-----------------------------FGFS---------------------------------Y----SSNDLPKPQKRSGEAFADRDYAPNFNFG-----------------A--F-----------------D-----I-------LD--GLY-NQK--QSYYGMISEFQKLDKSLQT-----P-------EKLAEI---VNKNSEFP--------I--TA-EQAK--------NVLASKPN-PYRLAQHKYL---------------SAEEVPAINDFDAFFPYNDRGNLLAREQATGQNIV----WGTGTHTHTPVNVFAWGPAEK--ILPVSKIMHHSELGEYIKQQVN--------
23 PsiBlast_CBE 84.1934% -43 - C6 -2X98 ? B:[6-416] --------------------------------------------NAIAYIVDGMGQTQISAARYLNAY------KTAPERFPLNVS---------P-------A--E--T--PTG-FDAF----SSRGSM-TTFPDDP----Y--ETTTDSAAAATAFASGVKTYNGAIGGVQTS----------G------------GGFQRVDTVLERASAQGYATGLITTTEATHATPAAFAAHVEDRGNQ---------------T-------------------EIA---------------RQ---------------Y--------------I----EET-----------------QP--------------------DVILGGQRRDF---------------------------EAD-------A----------------------------SNGGTLVDAA--R------D-NGYTI----AET-AAEL----DAV----D----D----PPVLGLFSQESHLD-YYLDRK-----------N-----------------------D-----------P----------------------E-------NT-------QPNLDAMVDAGVDLLS-----GDPDKGFFLLVESGRVDHAGHAN-YPAQVAEQYEATQVAGQLVEYAETTAEPTFLVSTGDHECGG-----------------------------LTLG---------------------------------R----DS-------------------------P-----------------Y--E-----------------V-----E-------YD--VLA-AQK--ATTSRLRDLLA-------------G-------VRSADE---LESIVAAH--------TGITA-LTDR--------EVAKLRDA-P------------------------GS---------------------ISTILAERAGIA----FTTDGHTGTDVPVFAHGPNAA--RFD--AARDNT-------------------