@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA0144: (2015-12-23 )
MSRSNGSSSRRTFLRLAALLLPAGALLGSLPGVRAAARPRKLYLAGPDVFRADAVAHGEALKALCARYGFEGLYPLDNALPKQLAEPREQAAWIYRANIGLIERADAVLANLNFFRGAEPDSGTAFEVGYATALGKPVYGYVDDAGSYAERIRRHAPELIGEDPTRDRDGMTLEEFGLPLNLMLAVPATLVVGDAEQALRQLASRRHG

Atome Classification :

(20 SA) --------------------------------------------------------------------------------------------------.........10........20........30........40........50--.--------.-.-......60......----..--70-.-........----80------..-------.-.....--.90....----....100---........110--...--....120.......130..-.....140.......150.......160.......170.------------......180......----.190----------..----.......200......----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --------------------------------------------------------------------------------------------------MSRSNGSSSRRTFLRLAALLLPAGALLGSLPGVRAAARPRKLYLAGPDVF---R--------A-D-AVAHGEALKALCAR----YG--F--E-GLYPLDNA----L-------PK-------Q-LAEPR--EQAAWIY----RANIG-L---IERADAVLANL--NFF--RGAEPDSGTAFEVGYATAL-GKPVYGYVDDAGSYAERIRRHAPELIGEDPTRDRDGMTL------------EEFGLPLNLMLAVPA----TL------------VV----GDAEQALRQLASRRHG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41 HHSearch 98.5638% -83 - C2 -2F62 ? A:[9-159] ----------------------------------------------------------------------------------------------------------------------------------------MRKIYIAGPAVF---N--------PDM-GASYYNKVRELLKK----EN--V--M-PLIPTDNE----A-------------------------TEALDIR----QKNIQ-M---IKDCDAVIADL--SPF--RGHEPDCGTAFEVGCAAAL-NKMVLTFTSDRRNMREKYGS----------GVDKDNLRV------------EGFGLPFNLMLYDGV----E-------------VF----DSFESAFKYFLANFPS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 88.2239% -78 - C2 -2F67 ? A:[10-137] -----------------------------------------------------------------------------------------------------------------------------------------RKIYIAGPAVF---N--------P-DMGASYYNKVRELLKK----EN--V--M-PLIPTDNE----A-------TE-------A-LD----------IR----QKNIQ-M---IKDCDAVIADL--SPF--RGHEPDCGTAFEVGCAAAL-NKMVLTFTSD--------RRNMREKYGS--GVDKDNLRV------------EGFGLPFNLMLYDGV----EV------------FD----SFESAFKYFLANFPS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 87.7139% -76 - C2 -2F62 ? A:[10-137] -----------------------------------------------------------------------------------------------------------------------------------------RKIYIAGPAVF---N--------P-DMGASYYNKVRELLKK----EN--V--M-PLIPTDNE----A-------TE-------A-LD----------IR----QKNIQ-M---IKDCDAVIADL--SPF--RGHEPDCGTAFEVGCAAAL-NKMVLTFTSD--------RRNMREKYGS--GVDKDNLRV------------EGFGLPFNLMLYDGV----EV------------FD----SFESAFKYFLANFPS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 87.6839% -77 - C2 -2F2T ? A:[10-137] -----------------------------------------------------------------------------------------------------------------------------------------RKIYIAGPAVF---N--------P-DMGASYYNKVRELLKK----EN--V--M-PLIPTDNE----A-------TE-------A-LD----------IR----QKNIQ-M---IKDCDAVIADL--SPF--RGHEPDCGTAFEVGCAAAL-NKMVLTFTSD--------RRNMREKYGS--GVDKDNLRV------------EGFGLPFNLMLYDGV----EV------------FD----SFESAFKYFLANFPS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 87.2939% -74 - C2 -2F64 ? A:[10-137] -----------------------------------------------------------------------------------------------------------------------------------------RKIYIAGPAVF---N--------P-DMGASYYNKVRELLKK----EN--V--M-PLIPTDNE----A-------TE-------A-LD----------IR----QKNIQ-M---IKDCDAVIADL--SPF--RGHEPDCGTAFEVGCAAAL-NKMVLTFTSD--------RRNMREKYGS--GVDKDNLRV------------EGFGLPFNLMLYDGV----EV------------FD----SFESAFKYFLANFPS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 87.0139% -73 - C2 -2A0K ? A:[10-137] -----------------------------------------------------------------------------------------------------------------------------------------RKIYIAGPAVF---N--------P-DMGASYYNKVRELLKK----EN--V--M-PLIPTDNE----A-------TE-------A-LD----------IR----QKNIQ-M---IKDCDAVIADL--SPF--RGHEPDCGTAFEVGCAAAL-NKMVLTFTSD--------RRNMREKYGS--GVDKDNLRV------------EGFGLPFNLMLYDGV----EV------------FD----SFESAFKYFLANFPS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42 HHSearch 74.0024% -68 * C4 *3EHD ? A:[4-161] ----------------------------------------------------------------------------------------------------------------------------------------MTKIYFAGPL-F---S--------Q-A-DLRYNAYLVEQIRQLD--KT--I--D-LYLPQENA----A-------IN-------D--KSAY--ADSKMIA----LADTE-N---VLASDLLVALL--D-----GPTIDAGVASEIGVAYAK-GIPVVALYTDSRQQGADNH----------QKLDALNEIA------------ENQFHYLNLYTVGLI----KLNGR---------VV----SSEEDLLEEIKQRL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44 HHSearch 73.1022% -63 - C4 -1F8Y NTD_LACLE A:[2-142] ---------------------------------------------------------------------------------------------------------------------------------------PKKTIYFGAGW-F---T--------D-R-QNKAYKEAMEALKE----NPTIDLEN-SYVPLDNQ----Y-------KGIRVDEHPE-YLHDK--VWATATY----NNDLN-G---IKTNDIMLGVY--I-----PDEEDVGLGMELGYALSQ-GKYVLLVIPDEDY-----------------------------------------GKPINLMSWG-V----SD------------NV----IKMSQLKDFNFNKPRF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
66 Fugue 69.2715% -63 - C4 -1F8X - NTD_LACLE A:[2-157] ---------------------------------------------------------------------------------------------------------------------------------------PKKTIYFGAG-WF---T--------D-R-QNKAYKEAMEALKENPTIDL--E--N-SYVPLDNQ----YKGIRVDEHP-------E-YLHDK--VWATATY----NNDLN-G---IKTNDIMLGVY--I-----PDEEDVGLGMELGYALSQ-GKYVLLVI----------------------PDEDYGKPI------------NLMSWGVSDNVIKMS----QL------------KD----FNFNKPRFDFYEGAVY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
65 Fugue 68.5017% -64 - C4 -4JEM ? A:[14-170] ------------------------------------------------------------------------------------------------------------------------------AVGSVFLGGPFRQLVDPRTGVM---S--------S-G-DQNVFSRLIEHFES----RG--T--T-VYNAHRRE----A-------W-----------GAEF--LSPAEAT----RLDHD-E---IKAADVFVAFP--------GVPASPGTHVEIGWASGM-GKPMVLLLERDEDYAFLVTGL------------ESQANV------------EILRFS-------GT----EE------------IV----ERLDGAVARVLGRAGEPTV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
71 Fugue 58.1719% -71 - C- -3WPU ? A:[3-540] GLQDGPEPTIHTQQAYAPEDDFTAKWTRADARQLQRMSDPTAPSRENSMPASVTMPTVPQDFPDMSNEQVWVWDTWPLTDEDANQYSVNGWEIIFSLVADRNLGFDDRHVFAKIGYFYRPAG--------VPAAERPEN-------------------------------------GG----WT--Y--G-GLVFKEGV----T-------GQ-------I-FEDQSFSHQTQWSG----SARVS-K---NGEIKLFFTDV--AFY--RNSDGTNIKPYDPRIALSV-GKVK---ANKKGVTLTGF-NKVTDLLQADGTYYQTGAQN------------EFFNFRDPFTFEDPAHPGETF------------MV----FEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNKQLTEWEFLPPILSANCVTDQTERPQIYFKDGKSYLFTISHRGTFAAGLDGPEGVYGFVGDGIRSDYQPLNGGSGLALGNPTNLNFLGGQPFAPDFNQHPGHFQAYSHYVMPGGLVQSFIDTIGTHDDFVRGGTLAPTVKMDIGVGGDPTKTAVDYSYGSEGLGGWADIPANKHLFTNGKFGVAVSDEAAQKIRKILGSKFDDYLDGKPVSATVRALIEKLLAQY
67 Fugue 57.1716% -51 * C3 *1IPA - ? A:[1-263] ------------------------------------------------------------------MRITSTANPRIKELARLLERKHRDSQRRFLIEGAREIERALQAGIE-LEQALVWEGGLNPEEQQVYAALL----ALLEVSEA---V--------L-K-KLSVRDNPAGLIAL----AR--M--P-ERTL----------------EE-------Y-RPSPD--ALILVAVGLEKPGNLGAV---LRSADAAGAEA--VLVAG-GVDLYSPQVIRNSTGVVF-SLRTLAA-SESEVLD-WIKQHNLPLVATTPHAEALYWEANLRPPVAIAVGPEHEGLRAAWLEAAQT----QVRIPMQGQADSLNVS----VSAALLLYEALRQRLL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
64 Fugue 56.5617% -32 - C4 -2KHZ - DNPH1_RAT A:[1-163] --------------------------------------------------------------------------------------------------MAASGEQ------------------------------APCSVYFCGSIRG---G--------R-E-DQALYARIVSRLRR----YG--K--VLTEHVADAE----L-------EP-------L-GEEAA--GGDQFIH----EQDLN-W---LQQADVVVAEV--T-------QPSLGVGYELGRAVAL-GKPILCLFRPQSGRVLSAMIRGAADGSR----------F------------QVWDYAEGEVETMLD----RY------------FE----AYLPQKTASSSHPSA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 54.1327% -32 - C2 -3EHD ? A:[6-107] ------------------------------------------------------------------------------------------------------------------------------------------KIYFAGPLFS---Q--------A-D-LRYNA-------------YL--V--E-QIRQLDKTIDLYL-------PQ-------E-NAAIN--DKSAYAD----SKMIA-L---ADTENVLASDLLVALL--DGPTIDAGVASEIGVAYAK-GIPVVALYTDSRQQGADNHQKLDALNEIAENQFHYLNLY------------TVGLIKLNGRVVSSE----ED------------LL----EEIKQRL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
68 Fugue 53.9316% -55 - C1 -3ZN6 - ? A:[46-271] --------------------------------------------------------------------------------------GGWGFAWIDNEDFSPTGLAWRSGEYFALAQMKTPET----AHFRIAAQERRLRIYLRGQKVV---N--------G-R-NLSDPDSRTVN-----------L--P-FLMQTPQG----A-------PT-------L-PSTYHP-DVAVWAK----VGSTW-QPCVITAINYSTGDV--TFT--EPAGVTASDGIEIYYVHGD-GQFRLRVARDA-SAATVFNQSFSTMHSVDQNNVETMIAWPQQ---------VELVPGTRLVLEVFT----TQ------------VPMVWNERSGHYIQIAAMGRRI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45 HHSearch 51.2323% -43 - C2 -2KHZ - DNPH1_RAT A:[5-111] ------------------------------------------------------------------------------------------------------------------------------------GEQAPCSVYFCGSIRG---G--------R-E-DQALYARIVSRLRR----YG--K--V-LTEHVADA----E-------LE-------PLGEEAA--GGDQFIH----EQDLN-W---LQQADVVVAEV--T-------QPSLGVGYELGRAVAL-GKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEV------------ETMLDRYFEAYLPQK----TA------------SS----SHPSA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
47 HHSearch 42.5112% -33 - C2 -3HYN - ? A:[4-120] ---------------------------------------------------------------------------------------------------------------------------------------YQNANYSAFYV-SEPFSESNLGANST-H-DFVYYNMLRMWKGED---NS--F--P-FNDAHDKT----Y-------NV----------RDGS--DWEKTLK----PRLHT-R---LDNSKNIILFL--SS----ITANSRALREEMNYGIGTKGLPVIVIYPDYDKKSDIVDSNGNFKKQIKDLWDKLPAFR------------DNMSSVATLHIPCTK----SV------------II----SALNNEDFMVNTMADA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39 PsiBlast_CBE 42.0734% -45 - C2 -4FYH DNPH1_RAT B:[57-97] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FIH----EQNLN-W---LQQADVVVAEV--T-------QPSLGVGYELGRAVAL-GKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEV------------ETMLDRYFEAY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38 PsiBlast_CBE 41.5434% -48 - C2 -4FYH DNPH1_RAT C:[57-97] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FIH----EQNLN-W---LQQADVVVAEV--T-------QPSLGVGYELGRAVAL-GKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEV------------ETMLDRYFEAY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 41.4734% -42 - C2 -4KXL DNPH1_RAT A:[57-97] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FIH----EQNLN-W---LQQADVVVAEV--T-------QPSLGVGYELGRAVAL-GKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEV------------ETMLDRYFEAYLV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------