@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PA3484: (2016-02-17 )
MTATSDLIESLISYSWDDWQVTRQEARRVIAAIRNDNVPDATIAALDKSGSLIKLFQRVGPPELARSLIASIAGRTTMQRYQARNALIRSLINNPLGTQTDNWIYFPTITFFDICADLADAAGRLGFAAAGATGVASQAIQGPFSGVGATGVNPTDLPSIAFGDQLKLLNKDPATVTKYSNPLGDLGAYLSQLSPQDKLNQAQTLVGQPISTLFPDAYPGNPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQTRDEDAKDYQAAVSIKSANTSIGLGQVVVSTAIKYELFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQQDLRKLPKTRGAFPSIDLRAYAGNPRNWPRDNVRALASEYTSRPWDDNLSPGWPMFVDDAYATFLDPGMRFP
Atome Classification :
(20 SA)
--------------.........--10........20.......-----.30........--40..----...--.-..50.....------...60........70........80.....------...90...----------.....-100.......110..----------------.....120.-----------...------...130.......140.......150.......160.......170.......180.......190-.......-..200.......210......------.-220....--.---..230.......240.......250.......260..-------....-----------------------------.270-.......280......--.290.......300...-....310.......320.......330.......340..--.....350.--......360.......370..--.....380.....--..390.......400......-------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
--------------MT
A
T
S
D
L
I
E
--
S
L
I
SYSWD
D
W
Q
V
T
R
Q
E
A
R
R
-----
V
I
A
A
I
RNDNVP--D
A
T
I
----
A
A
L--D-KS
G
S
L
I
K
L
F
------
Q
RVG
P
P
E
L
A
R
S
L
I
A
S
I
AG
R
T
T
M
Q
R
Y
Q
A
R
N
A
------
L
I
R
S
L
INN----------PLGTQ-TD
N
W
I
Y
FP
T
I
T
F
F
D
I
----------------
C
A
D
L
A
D
A
AG-----------RLG------FAAAGAT
G
V
A
S
Q
A
IQGPFSGVGATGVNPTDLPSIAFGD
Q
L
K
LLNKDPATVTKYSNP
L
G
D
L
G
A
Y
L
---
S
QLS
P
Q
D
-
K
L
N
Q
A
Q
T
L
VGQ
P
I
S
T
LFPDAY------P-GNP
P
S
R
A
--
K
---
V
M
S
A
A
ARKYDL
T
P
Q
L
I
G
A
I
I
LAEQRDQTRDED
A
K
D
Y
Q
-------
A
A
V
S
-----------------------------
I
KSA-NTSIG
L
G
Q
V
V
V
S
T
A
I
K
--
Y
E
L
F
T
D
L
L
G
Q
P
V
R
R
G
L
S
-
R
K
A
V
A
T
L
L
ASDE
F
N
I
F
A
T
A
R
Y
I
R
Y
V
A
N
LA
S
Q
Q
D
L
R
KLPK--TRGAFPS
I
D
--
L
R
A
YAGNPRNW
P
R
D
N
V
R
A
L
A
S
--
E
YTSRPWDDNLSP--GW
P
M
F
VD
D
A
Y
A
T
F
LDPGMRFP-------------------------
37
Fugue
90.63
100%
-84
- C3 -
4LUQ
3
?
A:
[20-428]
-------------H
M
T
A
T
S
D
L
I
E
--
S
L
I
S
Y
S
W
D
D
W
Q
V
T
R
Q
E
A
R
R
-----
V
I
A
A
I
R
N
D
N
V
P
--
D
A
T
I
----
A
A
L
--
D
-
K
S
G
S
L
I
K
L
F
------
Q
R
V
G
P
P
E
L
A
R
S
L
I
A
S
I
A
G
R
T
T
M
Q
R
Y
Q
A
R
N
A
------
L
I
R
S
L
I
N
N
----------
P
L
G
T
Q
-
T
D
N
W
I
Y
F
P
T
I
T
F
F
D
I
----------------
C
A
D
L
A
D
A
A
G
-----------
R
L
G
------
F
A
A
A
G
A
T
G
V
A
S
Q
A
I
Q
G
P
F
S
G
V
G
A
T
G
V
N
P
T
D
L
P
S
I
A
F
G
D
Q
L
K
L
L
N
K
D
P
A
T
V
T
K
Y
S
N
P
L
G
D
L
G
A
Y
L
---
S
Q
L
S
P
Q
D
-
K
L
N
Q
A
Q
T
L
V
G
Q
P
I
S
T
L
F
P
D
A
Y
------
P
-
G
N
P
P
S
R
A
--
K
---
V
M
S
A
A
A
R
K
Y
D
L
T
P
Q
L
I
G
A
I
I
L
A
E
Q
R
D
Q
T
R
D
E
D
A
K
D
Y
Q
-------
A
A
V
S
-----------------------------
I
K
S
A
-
N
T
S
I
G
L
G
Q
V
V
V
S
T
A
I
K
--
Y
E
L
F
T
D
L
L
G
Q
P
V
R
R
G
L
S
-
R
K
A
V
A
T
L
L
A
S
D
E
F
N
I
F
A
T
A
R
Y
I
R
Y
V
A
N
L
A
S
Q
Q
D
L
R
K
L
P
K
--
T
R
G
A
F
P
S
I
D
--
L
R
A
Y
A
G
N
P
R
N
W
P
R
D
N
V
R
A
L
A
S
--
E
Y
T
S
R
P
W
D
D
N
L
S
P
--
G
W
P
M
F
V
D
D
A
Y
A
T
F
L
D
P
G
M
R
F
P
-------------------------
1
PsiBlast_PDB
90.46
100%
-84
- C3 -
4LUQ
3
?
A:
[21-428]
--------------
M
T
A
T
S
D
L
I
E
--
S
L
I
S
Y
S
W
D
D
W
Q
V
T
R
Q
E
A
R
R
-----
V
I
A
A
I
R
N
D
N
V
P
--
D
A
T
I
----
A
A
L
--
D
-
K
S
G
S
L
I
K
L
F
------
Q
R
V
G
P
P
E
L
A
R
S
L
I
A
S
I
A
G
R
T
T
M
Q
R
Y
Q
A
R
N
A
------
L
I
R
S
L
I
N
N
----------
P
L
G
T
Q
-
T
D
N
W
I
Y
F
P
T
I
T
F
F
D
I
----------------
C
A
D
L
A
D
A
A
G
-----------
R
L
G
------
F
A
A
A
G
A
T
G
V
A
S
Q
A
I
Q
G
P
F
S
G
V
G
A
T
G
V
N
P
T
D
L
P
S
I
A
F
G
D
Q
L
K
L
L
N
K
D
P
A
T
V
T
K
Y
S
N
P
L
G
D
L
G
A
Y
L
---
S
Q
L
S
P
Q
D
-
K
L
N
Q
A
Q
T
L
V
G
Q
P
I
S
T
L
F
P
D
A
Y
------
P
-
G
N
P
P
S
R
A
--
K
---
V
M
S
A
A
A
R
K
Y
D
L
T
P
Q
L
I
G
A
I
I
L
A
E
Q
R
D
Q
T
R
D
E
D
A
K
D
Y
Q
-------
A
A
V
S
-----------------------------
I
K
S
A
-
N
T
S
I
G
L
G
Q
V
V
V
S
T
A
I
K
--
Y
E
L
F
T
D
L
L
G
Q
P
V
R
R
G
L
S
-
R
K
A
V
A
T
L
L
A
S
D
E
F
N
I
F
A
T
A
R
Y
I
R
Y
V
A
N
L
A
S
Q
Q
D
L
R
K
L
P
K
--
T
R
G
A
F
P
S
I
D
--
L
R
A
Y
A
G
N
P
R
N
W
P
R
D
N
V
R
A
L
A
S
--
E
Y
T
S
R
P
W
D
D
N
L
S
P
--
G
W
P
M
F
V
D
D
A
Y
A
T
F
L
D
P
G
M
R
F
P
-------------------------
16
PsiBlast_CBE
90.43
100%
-83
- C3 -
4LUQ
3
?
B:
[21-428]
--------------
M
T
A
T
S
D
L
I
E
--
S
L
I
S
Y
S
W
D
D
W
Q
V
T
R
Q
E
A
R
R
-----
V
I
A
A
I
R
N
D
N
V
P
--
D
A
T
I
----
A
A
L
--
D
-
K
S
G
S
L
I
K
L
F
------
Q
R
V
G
P
P
E
L
A
R
S
L
I
A
S
I
A
G
R
T
T
M
Q
R
Y
Q
A
R
N
A
------
L
I
R
S
L
I
N
N
----------
P
L
G
T
Q
-
T
D
N
W
I
Y
F
P
T
I
T
F
F
D
I
----------------
C
A
D
L
A
D
A
A
G
-----------
R
L
G
------
F
A
A
A
G
A
T
G
V
A
S
Q
A
I
Q
G
P
F
S
G
V
G
A
T
G
V
N
P
T
D
L
P
S
I
A
F
G
D
Q
L
K
L
L
N
K
D
P
A
T
V
T
K
Y
S
N
P
L
G
D
L
G
A
Y
L
---
S
Q
L
S
P
Q
D
-
K
L
N
Q
A
Q
T
L
V
G
Q
P
I
S
T
L
F
P
D
A
Y
------
P
-
G
N
P
P
S
R
A
--
K
---
V
M
S
A
A
A
R
K
Y
D
L
T
P
Q
L
I
G
A
I
I
L
A
E
Q
R
D
Q
T
R
D
E
D
A
K
D
Y
Q
-------
A
A
V
S
-----------------------------
I
K
S
A
-
N
T
S
I
G
L
G
Q
V
V
V
S
T
A
I
K
--
Y
E
L
F
T
D
L
L
G
Q
P
V
R
R
G
L
S
-
R
K
A
V
A
T
L
L
A
S
D
E
F
N
I
F
A
T
A
R
Y
I
R
Y
V
A
N
L
A
S
Q
Q
D
L
R
K
L
P
K
--
T
R
G
A
F
P
S
I
D
--
L
R
A
Y
A
G
N
P
R
N
W
P
R
D
N
V
R
A
L
A
S
--
E
Y
T
S
R
P
W
D
D
N
L
S
P
--
G
W
P
M
F
V
D
D
A
Y
A
T
F
L
D
P
G
M
R
F
P
-------------------------
3
PsiBlast_PDB
90.30
99%
-89
- C3 -
3WA5
6
?
A:
[2-408]
---------------
T
A
T
S
D
L
I
E
--
S
L
I
-------
Q
V
T
R
Q
E
A
R
R
-----
V
I
A
A
I
R
N
D
N
V
P
--
D
A
T
I
----
A
A
L
--
D
-
K
S
G
S
L
I
K
L
F
------
Q
R
V
G
P
P
E
L
A
R
S
L
I
A
S
I
A
G
R
T
T
M
Q
R
Y
Q
A
R
N
A
------
L
I
R
S
L
I
N
N
----------
P
L
G
T
Q
-
T
D
N
W
I
Y
F
P
T
I
T
F
F
D
I
----------------
C
A
D
L
A
D
A
A
G
-----------
R
L
G
------
F
A
A
A
G
A
T
G
V
A
S
Q
A
I
Q
G
P
F
S
G
V
G
A
T
G
V
N
P
T
D
L
P
S
I
A
F
G
D
Q
L
K
L
L
N
K
D
P
A
T
V
T
K
Y
S
N
P
L
G
D
L
G
A
Y
L
---
S
Q
L
S
P
Q
D
-
K
L
N
Q
A
Q
T
L
V
G
Q
P
I
S
T
L
F
P
D
A
Y
------
P
-
G
N
P
P
S
R
A
--
K
---
V
M
S
A
A
A
R
K
Y
D
L
T
P
Q
L
I
G
A
I
I
L
A
E
Q
R
D
Q
T
R
D
E
D
A
K
D
Y
Q
-------
A
A
V
S
-----------------------------
I
K
S
A
-
N
T
S
I
G
L
G
Q
V
V
V
S
T
A
I
K
--
Y
E
L
F
T
D
L
L
G
Q
P
V
R
R
G
L
S
-
R
K
A
V
A
T
L
L
A
S
D
E
F
N
I
F
A
T
A
R
Y
I
R
Y
V
A
N
L
A
S
Q
Q
D
L
R
K
L
P
K
--
T
R
G
A
F
P
S
I
D
--
L
R
A
Y
A
G
N
P
R
N
W
P
R
D
N
V
R
A
L
A
S
--
E
Y
T
S
R
P
W
D
D
N
L
S
P
--
G
W
P
M
F
V
D
D
A
Y
A
T
F
L
D
P
G
M
R
F
P
-------------------------
4
PsiBlast_PDB
90.02
100%
-88
- C3 -
4N7S
12
?
A:
[1-401]
---------------
T
A
T
S
D
L
I
E
--
S
L
I
S
Y
S
W
D
D
W
Q
V
T
R
Q
E
A
R
R
-----
V
I
A
A
I
R
N
D
N
V
P
--
D
A
T
I
----
A
A
L
--
D
-
K
S
G
S
L
I
K
L
F
------
Q
R
V
G
P
P
E
L
A
R
S
L
I
A
S
I
A
G
R
T
T
M
Q
R
Y
Q
A
R
N
A
------
L
I
R
S
L
I
N
N
----------
P
L
G
T
Q
-
T
D
N
W
I
Y
F
P
T
I
T
F
F
D
I
----------------
C
A
D
L
A
D
A
A
G
-----------
R
L
G
------
F
A
A
A
G
A
T
G
V
A
S
Q
A
I
Q
G
P
F
S
G
V
G
A
T
G
V
N
P
T
D
L
P
S
I
A
F
G
D
Q
L
K
L
L
N
K
D
P
A
T
V
T
K
Y
S
N
P
L
G
D
L
G
A
Y
L
---
S
Q
L
S
P
Q
D
-
K
L
N
Q
A
Q
T
L
V
G
Q
P
I
S
T
L
F
P
D
A
Y
------
P
-
G
N
P
P
S
R
A
--
K
---
V
M
S
A
A
A
R
K
Y
D
L
T
P
Q
L
I
G
A
I
I
L
A
E
Q
R
D
Q
T
R
D
E
D
A
K
D
Y
Q
-------
A
A
V
S
-----------------------------
I
K
S
A
-
N
T
S
I
G
L
G
Q
V
V
V
S
T
A
I
K
--
Y
E
L
F
T
D
L
L
G
Q
P
V
R
R
G
L
S
-
R
K
A
V
A
T
L
L
A
S
D
E
F
N
I
F
A
T
A
R
Y
I
R
Y
V
A
N
L
A
S
Q
Q
D
L
R
K
L
P
K
--
T
R
G
A
F
P
S
I
D
--
L
R
A
Y
A
G
N
P
R
N
W
P
R
D
N
V
R
A
L
A
S
--
E
Y
T
S
R
P
W
D
D
N
L
S
P
--
G
W
P
M
F
V
D
D
A
Y
A
T
F
L
D
-------------------------------
18
PsiBlast_CBE
89.48
100%
-88
- C3 -
4N7S
9
?
C:
[1-401]
---------------
T
A
T
S
D
L
I
E
--
S
L
I
S
Y
S
W
D
D
W
Q
V
T
R
Q
E
A
R
R
-----
V
I
A
A
I
R
N
D
N
V
P
--
D
A
T
I
----
A
A
L
--
D
-
K
S
G
S
L
I
K
L
F
------
Q
R
V
G
P
P
E
L
A
R
S
L
I
A
S
I
A
G
R
T
T
M
Q
R
Y
Q
A
R
N
A
------
L
I
R
S
L
I
N
N
----------
P
L
G
T
Q
-
T
D
N
W
I
Y
F
P
T
I
T
F
F
D
I
----------------
C
A
D
L
A
D
A
A
G
-----------
R
L
G
------
F
A
A
A
G
A
T
G
V
A
S
Q
A
I
Q
G
P
F
S
G
V
G
A
T
G
V
N
P
T
D
L
P
S
I
A
F
G
D
Q
L
K
L
L
N
K
D
P
A
T
V
T
K
Y
S
N
P
L
G
D
L
G
A
Y
L
---
S
Q
L
S
P
Q
D
-
K
L
N
Q
A
Q
T
L
V
G
Q
P
I
S
T
L
F
P
D
A
Y
------
P
-
G
N
P
P
S
R
A
--
K
---
V
M
S
A
A
A
R
K
Y
D
L
T
P
Q
L
I
G
A
I
I
L
A
E
Q
R
D
Q
T
R
D
E
D
A
K
D
Y
Q
-------
A
A
V
S
-----------------------------
I
K
S
A
-
N
T
S
I
G
L
G
Q
V
V
V
S
T
A
I
K
--
Y
E
L
F
T
D
L
L
G
Q
P
V
R
R
G
L
S
-
R
K
A
V
A
T
L
L
A
S
D
E
F
N
I
F
A
T
A
R
Y
I
R
Y
V
A
N
L
A
S
Q
Q
D
L
R
K
L
P
K
--
T
R
G
A
F
P
S
I
D
--
L
R
A
Y
A
G
N
P
R
N
W
P
R
D
N
V
R
A
L
A
S
--
E
Y
T
S
R
P
W
D
D
N
L
S
P
--
G
W
P
M
F
V
D
D
A
Y
A
T
F
L
D
-------------------------------
6
PsiBlast_PDB
89.40
100%
-86
- C3 -
4M5F
5
?
A:
[2-400]
---------------
T
A
T
S
D
L
I
E
--
S
L
I
S
Y
S
W
D
D
W
Q
V
T
R
Q
E
A
R
R
-----
V
I
A
A
I
R
N
D
N
V
P
--
D
A
T
I
----
A
A
L
--
D
-
K
S
G
S
L
I
K
L
F
------
Q
R
V
G
P
P
E
L
A
R
S
L
I
A
S
I
A
G
R
T
T
M
Q
R
Y
Q
A
R
N
A
------
L
I
R
S
L
I
N
N
----------
P
L
G
T
Q
-
T
D
N
W
I
Y
F
P
T
I
T
F
F
D
I
----------------
C
A
D
L
A
D
A
A
G
-----------
R
L
G
------
F
A
A
A
G
A
T
G
V
A
S
Q
A
I
Q
G
P
F
S
G
V
G
A
T
G
V
N
P
T
D
L
P
S
I
A
F
G
D
Q
L
K
L
L
N
K
D
P
A
T
V
T
K
Y
S
N
P
L
G
D
L
G
A
Y
L
---
S
Q
L
S
P
Q
D
-
K
L
N
Q
A
Q
T
L
V
G
Q
P
I
S
T
L
F
P
D
A
Y
------
P
-
G
N
P
P
S
R
A
--
K
---
V
M
S
A
A
A
R
K
Y
D
L
T
P
Q
L
I
G
A
I
I
L
A
E
Q
R
D
Q
T
R
D
E
D
A
K
D
Y
Q
-------
A
A
V
S
-----------------------------
I
K
S
A
-
N
T
S
I
G
L
G
Q
V
V
V
S
T
A
I
K
--
Y
E
L
F
T
D
L
L
G
Q
P
V
R
R
G
L
S
-
R
K
A
V
A
T
L
L
A
S
D
E
F
N
I
F
A
T
A
R
Y
I
R
Y
V
A
N
L
A
S
Q
Q
D
L
R
K
L
P
K
--
T
R
G
A
F
P
S
I
D
--
L
R
A
Y
A
G
N
P
R
N
W
P
R
D
N
V
R
A
L
A
S
--
E
Y
T
S
R
P
W
D
D
N
L
S
P
--
G
W
P
M
F
V
D
D
A
Y
A
T
F
---------------------------------
7
PsiBlast_PDB
88.61
100%
-86
- C3 -
4N80
3
?
A:
[1-399]
---------------
T
A
T
S
D
L
I
E
--
S
L
I
S
Y
S
W
D
D
W
Q
V
T
R
Q
E
A
R
R
-----
V
I
A
A
I
R
N
D
N
V
P
--
D
A
T
I
----
A
A
L
--
D
-
K
S
G
S
L
I
K
L
F
------
Q
R
V
G
P
P
E
L
A
R
S
L
I
A
S
I
A
G
R
T
T
M
Q
R
Y
Q
A
R
N
A
------
L
I
R
S
L
I
N
N
----------
P
L
G
T
Q
-
T
D
N
W
I
Y
F
P
T
I
T
F
F
D
I
----------------
C
A
D
L
A
D
A
A
G
-----------
R
L
G
------
F
A
A
A
G
A
T
G
V
A
S
Q
A
I
Q
G
P
F
S
G
V
G
A
T
G
V
N
P
T
D
L
P
S
I
A
F
G
D
Q
L
K
L
L
N
K
D
P
A
T
V
T
K
Y
S
N
P
L
G
D
L
G
A
Y
L
---
S
Q
L
S
P
Q
D
-
K
L
N
Q
A
Q
T
L
V
G
Q
P
I
S
T
L
F
P
D
A
Y
------
P
-
G
N
P
P
S
R
A
--
K
---
V
M
S
A
A
A
R
K
Y
D
L
T
P
Q
L
I
G
A
I
I
L
A
E
Q
R
D
Q
T
R
D
E
D
A
K
D
Y
Q
-------
A
A
V
S
-----------------------------
I
K
S
A
-
N
T
S
I
G
L
G
Q
V
V
V
S
T
A
I
K
--
Y
E
L
F
T
D
L
L
G
Q
P
V
R
R
G
L
S
-
R
K
A
V
A
T
L
L
A
S
D
E
F
N
I
F
A
T
A
R
Y
I
R
Y
V
A
N
L
A
S
Q
Q
D
L
R
K
L
P
K
--
T
R
G
A
F
P
S
I
D
--
L
R
A
Y
A
G
N
P
R
N
W
P
R
D
N
V
R
A
L
A
S
--
E
Y
T
S
R
P
W
D
D
N
L
S
P
--
G
W
P
M
F
V
D
D
A
Y
A
T
F
---------------------------------
17
PsiBlast_CBE
88.55
100%
-86
- C3 -
4N88
4
?
C:
[1-401]
---------------
T
A
T
S
D
L
I
E
--
S
L
I
S
Y
S
W
D
D
W
Q
V
T
R
Q
E
A
R
R
-----
V
I
A
A
I
R
N
D
N
V
P
--
D
A
T
I
----
A
A
L
--
D
-
K
S
G
S
L
I
K
L
F
------
Q
R
V
G
P
P
E
L
A
R
S
L
I
A
S
I
A
G
R
T
T
M
Q
R
Y
Q
A
R
N
A
------
L
I
R
S
L
I
N
N
----------
P
L
G
T
Q
-
T
D
N
W
I
Y
F
P
T
I
T
F
F
D
I
----------------
C
A
D
L
A
D
A
A
G
-----------
R
L
G
------
F
A
A
A
G
A
T
G
V
A
S
Q
A
I
Q
G
P
F
S
G
V
G
A
T
G
V
N
P
T
D
L
P
S
I
A
F
G
D
Q
L
K
L
L
N
K
D
P
A
T
V
T
K
Y
S
N
P
L
G
D
L
G
A
Y
L
---
S
Q
L
S
P
Q
D
-
K
L
N
Q
A
Q
T
L
V
G
Q
P
I
S
T
L
F
P
D
A
Y
------
P
-
G
N
P
P
S
R
A
--
K
---
V
M
S
A
A
A
R
K
Y
D
L
T
P
Q
L
I
G
A
I
I
L
A
E
Q
R
D
Q
T
R
D
E
D
A
K
D
Y
Q
-------
A
A
V
S
-----------------------------
I
K
S
A
-
N
T
S
I
G
L
G
Q
V
V
V
S
T
A
I
K
--
Y
E
L
F
T
D
L
L
G
Q
P
V
R
R
G
L
S
-
R
K
A
V
A
T
L
L
A
S
D
E
F
N
I
F
A
T
A
R
Y
I
R
Y
V
A
N
L
A
S
Q
Q
D
L
R
K
L
P
K
--
T
R
G
A
F
P
S
I
D
--
L
R
A
Y
A
G
N
P
R
N
W
P
R
D
N
V
R
A
L
A
S
--
E
Y
T
S
R
P
W
D
D
N
L
S
P
--
G
W
P
M
F
V
D
D
A
Y
A
T
F
L
D
-------------------------------
2
PsiBlast_PDB
88.26
100%
-86
- C3 -
4M5E
7
?
A:
[2-402]
---------------
T
A
T
S
D
L
I
E
--
S
L
I
S
Y
S
W
D
D
W
Q
V
T
R
Q
E
A
R
R
-----
V
I
A
A
I
R
N
D
N
V
P
--
D
A
T
I
----
A
A
L
--
D
-
K
S
G
S
L
I
K
L
F
------
Q
R
V
G
P
P
E
L
A
R
S
L
I
A
S
I
A
G
R
T
T
M
Q
R
Y
Q
A
R
N
A
------
L
I
R
S
L
I
N
N
----------
P
L
G
T
Q
-
T
D
N
W
I
Y
F
P
T
I
T
F
F
D
I
----------------
C
A
D
L
A
D
A
A
G
-----------
R
L
G
------
F
A
A
A
G
A
T
G
V
A
S
Q
A
I
Q
G
P
F
S
G
V
G
A
T
G
V
N
P
T
D
L
P
S
I
A
F
G
D
Q
L
K
L
L
N
K
D
P
A
T
V
T
K
Y
S
N
P
L
G
D
L
G
A
Y
L
---
S
Q
L
S
P
Q
D
-
K
L
N
Q
A
Q
T
L
V
G
Q
P
I
S
T
L
F
P
D
A
Y
------
P
-
G
N
P
P
S
R
A
--
K
---
V
M
S
A
A
A
R
K
Y
D
L
T
P
Q
L
I
G
A
I
I
L
A
E
Q
R
D
Q
T
R
D
E
D
A
K
D
Y
Q
-------
A
A
V
S
-----------------------------
I
K
S
A
-
N
T
S
I
G
L
G
Q
V
V
V
S
T
A
I
K
--
Y
E
L
F
T
D
L
L
G
Q
P
V
R
R
G
L
S
-
R
K
A
V
A
T
L
L
A
S
D
E
F
N
I
F
A
T
A
R
Y
I
R
Y
V
A
N
L
A
S
Q
Q
D
L
R
K
L
P
K
--
T
R
G
A
F
P
S
I
D
--
L
R
A
Y
A
G
N
P
R
N
W
P
R
D
N
V
R
A
L
A
S
--
E
Y
T
S
R
P
W
D
D
N
L
S
P
--
G
W
P
M
F
V
D
D
A
Y
A
T
F
L
D
-------------------------------
5
PsiBlast_PDB
88.14
100%
-84
- C3 -
4N88
4
?
A:
[1-401]
---------------
T
A
T
S
D
L
I
E
--
S
L
I
S
Y
S
W
D
D
W
Q
V
T
R
Q
E
A
R
R
-----
V
I
A
A
I
R
N
D
N
V
P
--
D
A
T
I
----
A
A
L
--
D
-
K
S
G
S
L
I
K
L
F
------
Q
R
V
G
P
P
E
L
A
R
S
L
I
A
S
I
A
G
R
T
T
M
Q
R
Y
Q
A
R
N
A
------
L
I
R
S
L
I
N
N
----------
P
L
G
T
Q
-
T
D
N
W
I
Y
F
P
T
I
T
F
F
D
I
----------------
C
A
D
L
A
D
A
A
G
-----------
R
L
G
------
F
A
A
A
G
A
T
G
V
A
S
Q
A
I
Q
G
P
F
S
G
V
G
A
T
G
V
N
P
T
D
L
P
S
I
A
F
G
D
Q
L
K
L
L
N
K
D
P
A
T
V
T
K
Y
S
N
P
L
G
D
L
G
A
Y
L
---
S
Q
L
S
P
Q
D
-
K
L
N
Q
A
Q
T
L
V
G
Q
P
I
S
T
L
F
P
D
A
Y
------
P
-
G
N
P
P
S
R
A
--
K
---
V
M
S
A
A
A
R
K
Y
D
L
T
P
Q
L
I
G
A
I
I
L
A
E
Q
R
D
Q
T
R
D
E
D
A
K
D
Y
Q
-------
A
A
V
S
-----------------------------
I
K
S
A
-
N
T
S
I
G
L
G
Q
V
V
V
S
T
A
I
K
--
Y
E
L
F
T
D
L
L
G
Q
P
V
R
R
G
L
S
-
R
K
A
V
A
T
L
L
A
S
D
E
F
N
I
F
A
T
A
R
Y
I
R
Y
V
A
N
L
A
S
Q
Q
D
L
R
K
L
P
K
--
T
R
G
A
F
P
S
I
D
--
L
R
A
Y
A
G
N
P
R
N
W
P
R
D
N
V
R
A
L
A
S
--
E
Y
T
S
R
P
W
D
D
N
L
S
P
--
G
W
P
M
F
V
D
D
A
Y
A
T
F
L
D
-------------------------------
45
Fugue
39.83
19%
-39
- C2 -
4J3R
9
?
A:
[4-383]
-------------------
A
T
L
P
--
T
T
A
S
S
S
T
A
V
A
S
S
Q
L
D
Q
L
A
N
-----
F
A
Y
N
V
T
T
D
S
V
A
--
G
C
T
L
----
Q
N
L
----
R
V
R
R
D
W
R
A
F
------
S
K
T
Q
K
K
D
Y
I
N
S
V
L
C
L
Q
K
L
P
S
R
T
P
A
H
L
A
P
G
A
RT
R
Y
D
D
F
V
A
T
H
I
N
Q
----------
T
Q
I
I
H
Y
T
G
T
F
L
A
W
H
R
Y
F
I
Y
E
F
----------------
E
Q
A
L
R
D
E
C
S
-----------
Y
T
G
D
Y
P
Y
W
N
W
G
A
D
A
D
N
M
E
K
S
Q
V
F
D
G
S
E
T
S
M
S
G
N
G
E
Y
I
P
N
Q
G
D
I
K
L
-----
L
L
G
N
Y
P
A
I
D
L
----
P
P
G
S
G
G
G
C
V
---
T
S
G
P
F
K
D
Y
K
L
N
L
G
P
A
A
L
S
L
P
G
G
N
M
T
A
A
A
N
------
P
-
L
T
Y
N
P
R
C
--
M
K
R
S
L
T
T
E
I
L
Q
R
Y
N
T
F
P
K
I
V
E
L
I
L
D
S
D
--------
D
I
W
D
F
Q
-------
M
T
M
Q
-----------------------------
G
V
P
G
-
S
G
S
I
G
-----
V
H
G
G
G
H
--
Y
S
M
G
----
G
D
P
G
R
---------
D
V
Y
V
S
P
G
D
T
A
F
W
L
H
H
G
M
I
D
R
V
W
W
I
W
Q
N
L
D
L
R
K
R
Q
N
--
A
I
S
G
T
G
T
-------
F
M
N
N
P
-----------
A
S
--
P
N
T
T
L
D
T
V
I
D
L
G
Y
AN
G
G
P
I
A
M
R
D
L
M
S
T
T
A
G
P
-
F
C
Y
V
Y
L-----------------------
40
Fugue
36.38
16%
-34
* C4 *
3ZPJ
-
?
A:
[1-356]
---------------
M
T
T
L
E
E
I
N
--
L
L
V
E
R
G
Y
------
Y
E
E
A
L
A
-----
K
V
Y
E
I
E
D
---
P
--
I
E
Q
V
----
Q
V
L
--
T
-
K
I
--
V
V
T
I
Y
------
Q
H
D
G
P
M
E
W
I
P
S
I
M
E
D
A
M
Y
I
A
K
K
L
R
D
P
A
N
K
A
------
V
A
Y
S
I
I
A
S
----------
T
L
A
I
M
-
E
Y
---
E
E
D
A
M
D
F
F
N
R
----------------
A
I
D
E
A
N
E
I
E
-----------
S
P
I
------
E
K
G
M
V
L
S
T
L
A
Y
H
L
A
I
A
G
Y
----------
P
D
N
A
L
E
I
F
N
I
A
F
D
T
I
I
G
A
E
T
S
Y
T
H
K
V
D
G
I
L
R
I
G
D
L
L
---
E
K
A
G
D
T
L
-
P
S
N
E
A
M
D
F
Y
K
M
A
F
D
I
F
D
K
L
H
V
------
N
-
Q
R
A
A
I
V
E
--
K
---
K
I
E
L
A
K
T
V
Y
D
V
G
L
P
Q
I
R
A
A
L
L
K
G
K
N
H
Y
A
L
A
I
I
K
K
K
Y
S
---------------------------------------------------
G
V
M
R
L
I
G
E
L
E
--
V
A
L
W
M
K
R
V
N
N
M
E
Y
L
D
V
V
-
D
K
A
F
E
C
C
-
E
S
P
R
F
T
D
V
N
V
Q
H
I
A
R
L
L
T
E
L
G
N
L
R
R
A
L
K
F
A
K
E
I
Q
N
I
H
K
R
S
E
A
--
L
K
A
I
A
L
E
L
V
R
--
R
K
K
F
E
E
V
K
K
--
I
I
E
S
I
P
--------------
D
P
K
I
R
E
E
A
L
N
E
I
G
T
I
E
-------------------------
46
Fugue
36.24
19%
-36
- C3 -
4CFP
3
MLTC_ECOLI
A:
[15-341]
------------------------------
D
T
N
G
F
D
I
L
M
G
Q
F
A
H
-----
N
I
E
N
I
W
G
-----------------------------
F
------
K
E
V
-----------
V
I
A
G
P
K
D
Y
V
K
Y
T
D
Q
Y
Q
-------
T
R
S
H
I
N
F
----------
D
D
G
-----------
T
I
T
I
E
T
I
----------------
A
G
T
E
P
A
A
H
L
-----------
R
R
A
------
I
I
K
T
L
L
M
G
D
D
P
S
S
V
D
-
L
Y
S
D
V
--
D
D
I
T
I
S
K
E
P
-
F
L
Y
G
----
Q
V
V
D
N
T
G
Q
P
I
R
W
E
G
R
A
S
N
F
A
D
Y
L
---
L
K
N
R
L
K
S
-
R
S
N
G
L
R
I
I
Y
S
V
T
I
N
-
M
V
P
N
H
L
------
D
-
K
R
A
H
K
Y
L
--
G
---
M
V
R
Q
A
S
R
K
Y
G
V
D
E
S
L
I
L
A
I
M
Q
T
Q
S
S
F
N
P
-------------------
Y
-----------------------------
A
V
S
R
-
S
D
A
L
G
L
M
Q
V
V
Q
H
T
A
G
K
--
D
V
F
R
S
--------
Q
G
K
S
-
G
T
P
S
R
S
F
L
F
D
P
A
S
N
I
D
T
G
T
A
Y
L
A
M
L
N
N
V
-
Y
L
G
G
I
D
N
P
T
S
--
R
R
Y
A
V
I
T
A
Y
--
N
G
G
A
G
S
V
L
R
V
F
S
N
D
K
I
Q
A
A
N
I
I
N
T
M
T
P
G
D
V
Y
Q
T
L
T
T
--
R
H
P
S
A
E
S
R
R
Y
L
Y
K
V
N
T
A
Q
K
S
Y
R
RR----------------------
23
HHSearch
35.87
18%
-43
- C3 -
1QSA
5
SLT_ECOLI
A:
[454-542]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
--
D
---
L
F
K
R
Y
T
S
G
K
E
I
P
Q
S
Y
A
M
A
I
A
R
Q
E
S
A
---
W
N
P
K
-------------
V
K
--------------------------------
S
P
-
V
G
A
S
G
L
M
Q
I
M
P
G
T
A
T
H
--
T
V
---------
K
M
F
S
I
P
-
G
Y
S
S
P
G
Q
L
L
D
P
E
T
N
I
N
I
G
T
S
Y
L
Q
Y
V
Y
Q
Q
F
G
----------------------------------------------------------------------------------------------------------
43
Fugue
32.68
19%
-32
- C1 -
4IWS
-
?
A:
[23-515]
M
N
R
S
A
L
D
F
R
H
F
V
D
H
L
R
R
Q
G
D
L
V
D
V
H
T
E
V
D
A
N
L
E
I
G
A
I
T
R
R
V
Y
E
R
RA
P
A
P
L
F
H
N
I
R
-
D
S
L
P
--
G
A
R
V
L
G
AP
A
G
L
RA
D
-
R
A
R
A
H
S
R
L
A
L
H
F
GLP
E
H
S
G
P
R
D
I
V
A
M
L
R
A
A
M
R
A
E
P
I
A
P
R
R
L
E
R
G
P
------
V
Q
E
N
V
W
L
G
EQVDLTRFPV
P
L
L
H
E
-
Q
D
G
G
R
Y
F
G
T
Y
G
F
H
V
V
Q
T
PDGS
W
D
S
W
S
V
G
R
L
M
L
V
D
R
N
T
L
A
G
P
T
I
PTQ
H
I
G
I
I
R
E
Q
------
W
R
R
L
G
K
P
T
P
W
A
M
A
L
G
A
P
P
A
A
L
A
A
A
G
M
P
L
P
E
--
G
V
S
E
A
G
Y
V
G
A
L
V
G
E
P
V
E
V
V
R
T
Q
T
N
----
G
L
W
V
PAN
T
E
I
V
L
E
G
-
E
I
S
L
D
E
T
A
L
E
G
P
M
G
E
Y
H
G
Y
S
F
------
P
I
G
K
P
Q
P
L
F
--
H
---
V
H
A
L
S
F
R
D
-----
Q
P
I
L
P
I
C
V
A
G
T
P
P
E
E
N
H
T
I
W
G
T
M
I
-------
S
A
Q
L
-----------------------------
L
D
V
A
Q
N
A
G
L
P
V
D
M
V
W
C
S
Y
E
A
A
TC
W
A
V
L
S
I
D
V
Q
R
L
A
A
L
G
T
D
-
A
A
A
F
A
A
R
V
A
E
T
V
F
G
S
H
A
-
G
H
L
V
P
K
L
I
L
V
G
N
D
I
D
V
T
E
I
D
Q
--
V
V
W
A
L
A
T
R
A
HP
L
H
D
H
F
A
F
P
Q
I
R
D
F
P
M
V
P
Y
L
D
A
--
E
D
K
A
R
------
G
S
--
G
G
R
L
V
I
N
C
L
Y
P
E
Q
F
A
G
Q
M
R
A
A
TASFRHAYP
T
A
L
R
R
R
V
E
E
R
W
SDYGF
22
HHSearch
31.52
20%
-30
- C3 -
1QUS
3
MLTB_ECOLI
A:
[73-225]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
A
W
L
R
Y
R
---
K
K
F
I
T
P
D
-
N
V
Q
N
G
V
V
F
W
N
Q
-----------------------
Y
E
--
D
---
A
L
N
R
A
W
Q
V
Y
G
V
P
P
E
I
I
V
G
I
I
G
V
E
T
R
W
G
R
V
---
M
G
K
T
R
I
L
D
A
L
A
T
L
S
F
N
YPRR
A
E
Y
F
S
G
E
L
E
T
F
L
L
M
A
R
D
E
QDDPLN
L
K
G
S
F
-
A
G
A
M
G
Y
G
Q
F
M
P
S
S
Y
K
Q
--
Y
A
V
D
F
S
--
G
-------
D
-
G
--
H
I
N
L
-
W
D
P
V
D
A
I
G
S
V
A
N
Y
F
K
A
H
G
--------------------------------------------------------------------------------------------------------------
33
HHSearch
31.20
31%
63
- C3 -
1XN9
-
RS24_METMA
A:
[25-50]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
------
E
-
G
S
T
P
S
R
N
--
D
---
V
R
N
K
L
A
A
M
L
N
A
P
L
E
L
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
Fugue
30.79
19%
-26
- C4 -
4F3V
6
ECCA1_MYCTU
A:
[1-275]
---------------
G
H
M
T
D
R
L
A
--
S
L
F
E
S
A
V
S
M
L
P
M
S
E
A
R
S
L
D
-----
L
F
T
E
I
T
N
Y
D
E
S
A
C
D
A
W
I
----
G
R
I
--
R
C
G
D
T
D
R
V
T
L
F
------
R
A
W
Y
S
R
R
N
F
G
Q
L
S
G
S
V
--
Q
I
S
M
S
T
L
N
A
R
I
A
-----------
I
G
G
----------
L
Y
G
D
------
I
T
Y
P
V
T
S
P
L
A
I
----------------
T
M
G
F
A
A
C
E
A
-----------
A
Q
G
------
N
Y
A
D
A
M
E
A
L
E
A
A
P
V
A
G
----------------
S
E
H
L
V
A
W
M
K
A
V
V
Y
G
A
A
---------
E
R
W
T
D
V
I
---
D
Q
V
K
S
A
G
-
K
---------------
W
P
D
K
F
------
L
-
A
G
A
A
G
V
A
--
H
---
G
V
A
A
A
N
L
-------------------------
A
L
F
T
E
-------
A
E
R
R
-----------------------------
L
T
E
A
-
N
D
S
P
A
---------------------
G
E
A
C
A
R
A
I
A
W
Y
L
A
M
A
R
R
S
Q
G
N
E
S
A
A
V
A
L
L
E
W
L
Q
T
T
--------------------
H
P
E
P
K
--
V
A
A
A
L
K
D
P
-
S
Y
R
L
K
T
T
T
A
E
Q
I
--
A
S
R
A
D
P
W
D
P
G
S
V
V
------------------------------------------------
11
PsiBlast_PDB
30.61
27%
-16
- C3 -
4IQJ
4
DPO3A_THEAQ
A:
[144-279]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
C
L
G
A
E
I
---
P
Q
F
I
L
Q
D
-
R
L
D
L
A
E
A
R
L
N
E
D
L
S
-
I
F
G
D
R
F
F
I
E
I
Q
N
H
-
G
L
P
E
Q
K
K
V
N
Q
---
V
L
K
E
F
A
R
K
Y
G
L
------
G
M
V
A
T
N
D
G
H
Y
V
R
K
E
D
A
R
A
H
E
-------
V
L
L
A
-----------------------------
I
Q
S
K
-
T
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------