@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0892: (2016-04-26 )
MTGRCPTVAVVGAGMSGMCVAITLLSAGITDVCIYEKADDVGGTWRDNTYPGLTCDVPSRLYQYSFAKNPNWTQMFSRGGEIQDYLRGIAERYGLRHRIRFGATVVSARFDDGRWVLRTDSGTESTVDFLISATGVLHHPRIPPIAGLDDFRGTVFHSARWDHTVPLLGRRIAVIGTGSTGVQLVCGLAGVAGKVTMFQRTAQWVLPWPNPRYSKLARVFHRAFPCLGSLAYKAYSLSFETFAVALSNPGLHRKLVGAVCRASLRRVRDPRLRRALTPDYEPMCKRLVMSGGFYRAIQRDDVELVTAGIDHVEHRGIVTDDGVLHEVDVIVLATGFDSHAFFRPMQLTGRDGIRIDDVWQDGPHAHQTVAIPGFPNFFMMLGPHSPVGNFPLTAVAESQAEHIVQWIKRWRHGEFDTMEPKSAATEAYNTVLRAAMPNTVWTTGCDSWYLNKDGIPEVWPFAPAKHRAMLANLHPEEYDLRRYAAVRATSRPQSA

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_4(3UOY)
OTEMO_PSEPU
[Raw transfer]



NAP_A_3(4D03)
PAMO_THEFY
[Raw transfer]



NAP_A_4(3UOZ)
OTEMO_PSEPU
[Raw transfer]



N01_A_3(4OVI)
PAMO_THEFY
[Raw transfer]



NAP_A_3(2YLT)
PAMO_THEFY
[Raw transfer]



NAP_A_4(3UP5)
OTEMO_PSEPU
[Raw transfer]



N01_A_3(4C74)
PAMO_THEFY
[Raw transfer]



NAP_A_3(2YLS)
PAMO_THEFY
[Raw transfer]



NAP_A_3(4RG3)
?
[Raw transfer]



NAP_A_3(4RG3)
?
[Raw transfer]



NAP_A_3(3GWD)
?
[Raw transfer]



NAP_A_3(4RG4)
?
[Raw transfer]



NAP_A_3(3GWF)
?
[Raw transfer]



NAP_A_5(4AP3)
?
[Raw transfer]



NAP_A_5(4AP3)
?
[Raw transfer]
8 PsiBlast_PDB 92.6030%-126 - C2 -3UOY 8.5 OTEMO_PSEPU
9 PsiBlast_PDB 91.4330%-119 - C2 -3UOZ 8.4 OTEMO_PSEPU
7 PsiBlast_PDB 90.5330%-119 - C2 -3UOX - OTEMO_PSEPU -
10 PsiBlast_PDB 90.4830%-122 - C2 -3UP5 7.0 OTEMO_PSEPU
5 PsiBlast_PDB 90.1533%-121 - C2 -4AP3 3.3 ?
11 PsiBlast_PDB 89.7331%-125 - C2 -1W4X - PAMO_THEFY -
13 PsiBlast_PDB 89.5931%-122 - C2 -2YLS 10.5 PAMO_THEFY
23 PsiBlast_CBE 89.4931%-122 - C2 -4D04 - PAMO_THEFY -
6 PsiBlast_PDB 89.4630%-119 - C2 -3UOV - OTEMO_PSEPU -
113 HHSearch 89.4333%-118 - C2 -4AP3 3.3 ?
15 PsiBlast_PDB 89.4131%-125 - C2 -4C74 10.6 PAMO_THEFY
24 PsiBlast_CBE 89.2831%-123 - C2 -4D03 10.0 PAMO_THEFY
16 PsiBlast_PDB 89.2131%-123 - C2 -4OVI 9.2 PAMO_THEFY
22 PsiBlast_CBE 89.0531%-120 - C2 -2YLX - PAMO_THEFY -
12 PsiBlast_PDB 88.8631%-123 - C2 -2YLR - PAMO_THEFY -
21 PsiBlast_CBE 88.5531%-123 - C2 -2YLZ - PAMO_THEFY -
4 PsiBlast_PDB 88.0932%-123 - C2 -3GWF 7.4 ?
1 PsiBlast_PDB 87.4632%-114 - C2 -4RG3 9.5 ?
114 HHSearch 87.4332%-117 - C2 -3UOX - OTEMO_PSEPU -
2 PsiBlast_PDB 87.1632%-121 - C2 -4RG4 6.9 ?
3 PsiBlast_PDB 87.0232%-112 - C2 -3GWD 9.4 ?
14 PsiBlast_PDB 86.8831%-117 - C2 -2YLT 9.3 PAMO_THEFY
112 HHSearch 86.4831%-118 - C2 -4RG3 9.9 ?