@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
LSCSQVTSGLAPCLPYLQGRGPLGGCCSGVKDLLAAAKTPADRKTACTCMKSTANSIKGIDAGKAASIPATCGVNIPYKISPSTDCTKVE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 95.8966%-125 - C1 -1T12 - NLTP1_TOBAC -
32 SP3 86.4556%-121 - C1 -1FK5 4.4 NLTP_MAIZE
14 HHSearch 86.2044%-117 - C1 -1SIY - NLTP1_VIGRR -
12 HHSearch 83.6646%-125 - C1 -2ALG 2.5 NLTP1_PRUPE
16 HHSearch 82.5247%-124 - C1 -1BWO 4.5 NLTP1_WHEAT
13 HHSearch 78.5957%-104 - C1 -1AFH - NLTP_MAIZE -
31 HHSearch 65.6230%-149 * C1 *1HSS - IAA1_WHEAT -
23 HHSearch 63.1426%-142 - C1 -1BEA - ITRF_MAIZE -
24 HHSearch 51.5623% -99 - C1 -1SM7 - ? -
26 HHSearch 50.9833% -80 - C1 -1PSY - 2SS_RICCO -
28 HHSearch 50.3125%-112 - C1 -1S6D - 2SS8_HELAN -
29 HHSearch 49.2815% -93 - C1 -1W2Q - CONG_ARAHY -
25 HHSearch 45.2616% -87 - C1 -3OB4 - ? -
21 HHSearch 44.1417%-120 - C1 -1B1U - IAAT_ELECO -
3 Fugue 43.6922% -86 - C1 -1L6H - NLTPX_ORYSJ -
17 HHSearch 42.0825% -82 - C1 -2RKN - DIRL1_ARATH -
2 Fugue 41.2425% -69 - C1 -2RKN - DIRL1_ARATH -
6 Fugue 39.3413% -54 - C1 -1W2Q - CONG_ARAHY -
9 Fugue 38.9722% -63 - C1 -3S40 - ? -
18 HHSearch 38.5125% -87 - C1 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
40 96.95100%-131 - C- -M040 - -
47 96.38100%-136 - C- -M047 - -
44 92.21100%-124 - C- -M044 - -
41 91.71100%-136 - C- -M041 - -
42 88.72100%-127 - C- -M042 - -