@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0770: (2015-12-04 )
MKSKVLSIFACFLISFSSYANMFDWGTRKVSDTNTYVCNCNQGLADLVEELIPAVVNISSEQIIKQENNNRTKTPSFAPRNNFFDDFREFFEHFDQFFTDRNPSINREVVLLGSGFIIDKSGTIVTNYHVIKNAQDITVTMNDNTYFKAEVLGYDARTDLAVLKIKADKDLSFVTFSNSDKARVGDTVMAIGNPFGLGGSVSTGIISARSRDISIGTTSEFIQTDAAINRGNSGGPLFDLNGKVIGINTAIYSPSESGGNVGIGFAIPSNLAISIIDTLKSGKKIKHGWLGVQVQPITREFAESLGLKDVKGALVANIVKDSPAEKGGIKVGDILLEFDGKKIDRMTQLPQMVSRTEPGKKVQIKLLRKGKEVNVKVVIEESVNDSKDSNTEENRSISDYITGLTVSNLPKEPKESKNDTPIKGVIVTNVDSNSNATLRGIKKGDIIIQLDGVDIENTENFQKQVDLAIKKSGKDSIMLLIYRNGNQFFTSIKLKK

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_Z_25(3STJ)
DEGQ_ECOLI
[Raw transfer]
-
CHAIN_D_4(3QO6)
DEGP1_ARATH
[Raw transfer]
-
DFP_A_2(3MH6)
DEGP_ECOLI
[Raw transfer]



CHAIN_H_8(3PV3)
?
[Raw transfer]
-
CHAIN_B_2(3NZI)
HTRA1_HUMAN
[Raw transfer]
-
CHAIN_F_6(3PV3)
?
[Raw transfer]
-
CHAIN_E_5(3PV3)
?
[Raw transfer]
-
CHAIN_Z_25(3STJ)
DEGQ_ECOLI
[Raw transfer]
-
CHAIN_D_4(3QO6)
DEGP1_ARATH
[Raw transfer]
-
CHAIN_D_4(3QO6)
DEGP1_ARATH
[Raw transfer]
-
CHAIN_Z_25(3STJ)
DEGQ_ECOLI
[Raw transfer]
-
CHAIN_G_7(3PV3)
?
[Raw transfer]
-
CHAIN_B_2(3MH7)
DEGP_ECOLI
[Raw transfer]
-
CHAIN_F_6(3QO6)
DEGP1_ARATH
[Raw transfer]
-
CHAIN_B_2(3OU0)
DEGP_ECOLI
[Raw transfer]
-
32 PsiBlast_CBE 96.4836%-101 - C1 -3PV3 5.7 ?
84 Fugue 94.3739% -94 - C1 -3PV2 - ? -
15 PsiBlast_PDB 93.2736% -99 - C1 -3PV3 4.6 ?
34 PsiBlast_CBE 91.7436% -97 - C1 -3PV3 5.6 ?
62 HHSearch 91.6637% -95 - C1 -3PV2 - ? -
14 PsiBlast_PDB 91.1236% -98 - C1 -3PV2 - ? -
33 PsiBlast_CBE 90.6636% -92 - C1 -3PV3 3.2 ?
16 PsiBlast_PDB 90.1936% -89 - C1 -4YNN - ? -
4 PsiBlast_PDB 88.2336% -87 - C1 -3OTP - DEGP_ECOLI -
1 PsiBlast_PDB 87.1536% -68 - C1 -3MH6 2.4 DEGP_ECOLI
8 PsiBlast_PDB 87.0136% -72 - C1 -3OU0 4.2 DEGP_ECOLI
5 PsiBlast_PDB 85.5836% -68 - C1 -3MH7 4.5 DEGP_ECOLI
6 PsiBlast_PDB 85.2136% -70 - C1 -3CS0 - DEGP_ECOLI -
25 PsiBlast_CBE 83.1140% -88 - C1 -3STJ - DEGQ_ECOLI -
29 PsiBlast_CBE 82.9940% -88 - C1 -3STJ - DEGQ_ECOLI -
30 PsiBlast_CBE 82.9240% -87 - C1 -3STJ Error DEGQ_ECOLI
23 PsiBlast_CBE 82.7840% -87 - C1 -3STJ - DEGQ_ECOLI -
22 PsiBlast_CBE 82.7840% -86 - C1 -3STJ - DEGQ_ECOLI -
28 PsiBlast_CBE 82.7340% -88 - C1 -3STJ - DEGQ_ECOLI -
24 PsiBlast_CBE 82.7240% -87 - C1 -3STJ - DEGQ_ECOLI -
13 PsiBlast_PDB 81.4440% -87 - C1 -3STJ 4.1 DEGQ_ECOLI
63 HHSearch 81.2441% -85 - C1 -3STJ 5.2 DEGQ_ECOLI
67 HHSearch 79.3940% -80 - C1 -3QO6 3.5 DEGP1_ARATH
36 PsiBlast_CBE 76.2341% -82 - C1 -3QO6 Error DEGP1_ARATH
35 PsiBlast_CBE 75.8541% -85 - C1 -3QO6 3.1 DEGP1_ARATH
18 PsiBlast_PDB 74.4841% -80 - C1 -3QO6 3.6 DEGP1_ARATH
38 PsiBlast_CBE 61.3132% -81 - C1 -3NZI 5.9 HTRA1_HUMAN