@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0133: (2016-03-12 )
MKFEKYIDHTLLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVKYAAERLADSEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHTVKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVKASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HPD_A_5(1UB3)
DEOC_THET8
[Raw transfer]



HPD_A_5(1UB3)
DEOC_THET8
[Raw transfer]



HPD_D_8(1UB3)
DEOC_THET8
[Raw transfer]



HPD_C_7(1UB3)
DEOC_THET8
[Raw transfer]



HPD_B_6(1UB3)
DEOC_THET8
[Raw transfer]



GOL_A_7(3R13)
DEOC_THEMA
[Raw transfer]



CIT_A_3(3R12)
DEOC_THEMA
[Raw transfer]



CIT_A_3(3R12)
DEOC_THEMA
[Raw transfer]



HPD_B_4(1JCL)
DEOC_ECOLI
[Raw transfer]



HPD_A_3(1JCL)
DEOC_ECOLI
[Raw transfer]



HPD_B_4(1JCJ)
DEOC_ECOLI
[Raw transfer]



HPD_A_3(1JCL)
DEOC_ECOLI
[Raw transfer]



HPD_A_3(1JCJ)
DEOC_ECOLI
[Raw transfer]



UNL_D_12(3NG3)
DEOC_MYCA1
[Raw transfer]



UNL_A_6(3NG3)
DEOC_MYCA1
[Raw transfer]



UNL_B_7(3NG3)
DEOC_MYCA1
[Raw transfer]



UNL_A_4(3NDO)
?
[Raw transfer]



UNL_B_7(3NDO)
?
[Raw transfer]



UNL_A_4(3NDO)
?
[Raw transfer]



UNL_C_9(3NG3)
DEOC_MYCA1
[Raw transfer]
21 PsiBlast_CBE 96.0754% -93 - C2 -3NGJ - ? -
57 HHSearch 96.0054% -85 - C2 -3R12 3.0 DEOC_THEMA
23 PsiBlast_CBE 95.5254% -92 - C2 -3NGJ - ? -
60 HHSearch 95.3454% -89 - C2 -3NGJ - ? -
22 PsiBlast_CBE 95.0554% -90 - C2 -3NGJ - ? -
1 PsiBlast_PDB 94.7054% -90 - C2 -3NGJ - ? -
3 PsiBlast_PDB 93.8254% -86 - C2 -3R13 1.9 DEOC_THEMA
59 HHSearch 93.7848% -87 * C2 *3OA3 - ? -
2 PsiBlast_PDB 93.3254% -85 - C2 -3R12 3.0 DEOC_THEMA
62 HHSearch 91.0342% -89 - C2 -1MZH - DEOC_AQUAE -
4 PsiBlast_PDB 90.4450% -86 - C2 -3OA3 - ? -
5 PsiBlast_PDB 87.6943% -81 - C2 -1MZH - DEOC_AQUAE -
25 PsiBlast_CBE 86.9543% -81 - C2 -1MZH - DEOC_AQUAE -
9 PsiBlast_PDB 86.2043% -76 - C2 -3NG3 3.0 DEOC_MYCA1
30 PsiBlast_CBE 85.4043% -77 - C2 -3NG3 3.3 DEOC_MYCA1
31 PsiBlast_CBE 85.3443% -79 - C2 -3NG3 3.2 DEOC_MYCA1
26 PsiBlast_CBE 85.1839% -77 - C2 -1UB3 4.1 DEOC_THET8
32 PsiBlast_CBE 84.7943% -76 - C2 -3NG3 2.9 DEOC_MYCA1
6 PsiBlast_PDB 84.4939% -75 - C2 -1J2W - DEOC_THET8 -
58 HHSearch 83.9339% -75 - C2 -1UB3 3.8 DEOC_THET8
7 PsiBlast_PDB 83.9339% -75 - C2 -1UB3 3.8 DEOC_THET8
28 PsiBlast_CBE 83.4239% -79 - C2 -1UB3 3.6 DEOC_THET8
61 HHSearch 83.0143% -83 - C2 -3NDO 2.9 ?
29 PsiBlast_CBE 82.6342% -84 - C2 -3NDO 2.9 ?
27 PsiBlast_CBE 82.4939% -77 - C2 -1UB3 4.0 DEOC_THET8
8 PsiBlast_PDB 81.9742% -84 - C2 -3NDO 2.9 ?
45 Fugue 74.3132% -74 - C2 -1JCL 2.7 DEOC_ECOLI
15 PsiBlast_PDB 72.5334% -69 - C2 -1JCJ 3.1 DEOC_ECOLI
13 PsiBlast_PDB 72.1335% -67 - C2 -1JCL 2.0 DEOC_ECOLI
34 PsiBlast_CBE 72.0735% -66 - C2 -1JCL 1.9 DEOC_ECOLI
35 PsiBlast_CBE 70.9834% -67 - C2 -1JCJ 3.1 DEOC_ECOLI