@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0137: (2016-03-12 )
MSQIEFKNVSKVYPNGHVGLKNINLNIEKGEFAVIVGLSGAGKSTLLRSVNRLHDITSGEIFIQGKSITKAHGKALLEMRRNIGMIFQHFNLVKRSSVLRNVLSGRVGYHPTWKMVLGLFPKEDKIKAMDALERVNILDKYNQRSDELSGGQQQRISIARALCQESEIILADEPVASLDPLTTKQVMDDLRKINQELGITILINLHFVDLAKEYGTRIIGLRDGEVVYDGPASEATDDVFSEIYGRTIKEDEKLGVN

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




2 PsiBlast_PDB 90.7840% -97 - C1 -4U02 - ? -
122 Fugue 90.7133% -95 - C1 -3TUZ - METN_ECOLI -
21 PsiBlast_CBE 90.5840%-101 - C1 -4U02 - ? -
23 PsiBlast_CBE 89.6840%-103 - C1 -4U02 - ? -
1 PsiBlast_PDB 88.2840%-102 - C1 -4U00 6.2 ?
22 PsiBlast_CBE 86.2940%-105 - C1 -4U02 - ? -
13 PsiBlast_PDB 84.5839% -99 - C1 -1F3O 6.0 Y796_METJA
102 HHSearch 83.3736% -98 * C1 *3TUI - METN_ECOLI -
31 PsiBlast_CBE 83.2935%-106 - C1 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 83.1439%-105 - C1 -1L2T 6.6 Y796_METJA
10 PsiBlast_PDB 82.7435%-107 - C1 -3TUI - METN_ECOLI -
25 PsiBlast_CBE 82.5340%-109 - C1 -4YMU 4.2 ?
33 PsiBlast_CBE 82.2638%-109 - C1 -3TIF 6.2 Y796_METJA
27 PsiBlast_CBE 82.2235%-108 - C1 -3TUZ - METN_ECOLI -
118 HHSearch 82.1433%-103 - C1 -1B0U 5.9 HISP_SALTY
11 PsiBlast_PDB 81.9135%-113 - C1 -3TUZ - METN_ECOLI -
9 PsiBlast_PDB 81.7439%-101 - C1 -1L2T 6.2 Y796_METJA
8 PsiBlast_PDB 80.9736%-103 - C1 -3DHW - METN_ECOLI -
30 PsiBlast_CBE 80.9435%-108 - C1 -3TUI - METN_ECOLI -
28 PsiBlast_CBE 80.5335%-106 - C1 -3TUZ - METN_ECOLI -
6 PsiBlast_PDB 80.4840%-104 - C1 -4YMV 3.8 ?
24 PsiBlast_CBE 79.9740%-106 - C1 -4YMV 3.7 ?
40 PsiBlast_CBE 79.6736%-106 - C1 -2OLK 4.1 ?
12 PsiBlast_PDB 79.2338%-100 - C1 -3TIF 5.8 Y796_METJA
5 PsiBlast_PDB 79.0540%-107 - C1 -4YMU 4.5 ?
15 PsiBlast_PDB 78.9936%-106 - C1 -2OLK 3.9 ?
34 PsiBlast_CBE 78.4436%-105 - C1 -3C4J 3.2 ?
98 PsiBlast_CBE 76.2731% -89 - C1 -2FGJ 7.2 HLYBP_ECOLX
14 PsiBlast_PDB 76.1636%-108 - C1 -2OLJ 3.8 ?
59 PsiBlast_CBE 74.4733%-109 - C1 -1B0U 3.9 HISP_SALTY
41 PsiBlast_CBE 74.1636%-102 - C1 -2OLK 3.9 ?
42 PsiBlast_CBE 73.8936%-101 - C1 -2OLJ 3.7 ?
19 PsiBlast_PDB 73.7836%-102 - C1 -3C41 5.1 ?
97 PsiBlast_CBE 73.7231% -92 - C1 -2FGJ 7.6 HLYBP_ECOLX
39 PsiBlast_CBE 73.6736%-104 - C1 -2OLK 4.0 ?
93 PsiBlast_CBE 73.5031% -87 - C1 -2FGK 7.1 HLYBP_ECOLX
17 PsiBlast_PDB 73.4336%-102 - C1 -2Q0H 3.5 ?
91 PsiBlast_CBE 73.4031% -90 - C1 -2FGK 6.3 HLYBP_ECOLX
18 PsiBlast_PDB 72.9036%-100 - C1 -3C4J 4.8 ?
100 PsiBlast_CBE 72.6231% -94 - C1 -1XEF 7.2
95 PsiBlast_CBE 72.4331% -95 - C1 -2FGJ 7.2
90 PsiBlast_CBE 72.4031% -93 - C1 -2FGK 7.4
88 PsiBlast_CBE 72.3032% -92 - C1 -2PMK 7.0
43 PsiBlast_CBE 71.3636%-104 - C1 -3C41 3.9 ?
99 PsiBlast_CBE 71.1431% -81 - C1 -2FFA 6.5
35 PsiBlast_CBE 70.4836%-102 - C1 -2Q0H 3.9 ?
86 PsiBlast_CBE 70.0731% -84 - C1 -2FF7 6.4
92 PsiBlast_CBE 68.9331% -92 - C1 -2FGK 7.4 HLYBP_ECOLX