@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0559: (2016-03-16 )
MFKVRQATEKDVVQIRDVATKAWFNTYLNIYAATTVNHLLEASYNEHHLKKRLQEQLFLVVEEGNDIVGFANFIYGEELYLSAHYVKPESQHTGYGTALLNEGLSRFEDKFEGVYLEVDNKNEEAVAYYKEQGFTILRSYQPEMYGEKLDLALMYKAF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_B_11(3FNC)
?
[Raw transfer]



EDO_A_9(3FNC)
?
[Raw transfer]
50 HHSearch 89.7532% -92 - C1 -3FNC 3.0 ?
1 PsiBlast_PDB 88.4133% -94 - C1 -3FNC - ? -
21 PsiBlast_CBE 87.0733% -90 - C1 -3FNC 2.5 ?
49 HHSearch 77.1924% -90 * C1 *1TIQ - PAIA_BACSU -
51 HHSearch 76.2525% -80 - C1 -2CY2 - ? -
70 Fugue 75.9925% -76 - C1 -2CY2 - ? -
2 PsiBlast_PDB 74.7727% -74 - C1 -1WK4 - ? -
14 PsiBlast_PDB 74.6824%-104 - C1 -3FIX - PAIA_THEAC -
10 PsiBlast_PDB 74.4824%-104 - C1 -3K9U - PAIA_THEAC -
12 PsiBlast_PDB 74.0224%-101 - C1 -3NE7 - PAIA_THEAC -
60 HHSearch 73.7423% -75 - C1 -3DR6 - MDDA_SALTY -
53 HHSearch 73.3024% -82 - C1 -1U6M - ? -
3 PsiBlast_PDB 73.2427% -72 - C1 -2CY2 - ? -
52 HHSearch 72.8019% -96 - C1 -1MK4 - YQJY_BACSU -
4 PsiBlast_PDB 72.4324% -99 - C1 -1TIQ - PAIA_BACSU -
57 HHSearch 72.1126% -89 - C1 -2B5G - SAT1_HUMAN -
13 PsiBlast_PDB 72.0024% -99 - C1 -3F0A - PAIA_THEAC -
64 HHSearch 70.0817% -84 - C1 -1GHE - TTR_PSEAJ -
58 HHSearch 69.8620% -75 - C1 -2AE6 - ? -
11 PsiBlast_PDB 68.4728% -99 - C1 -4PV6 - ? -