@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1385: (2016-03-25 )
MTPVFELKNVNYYYDHKKVLENINIKINKGEFLAIVGPNGAGKSTLLKLILGLLPLQSGEIFVEGIDFKNKKTSIKLSYVSQKANAFNSGFPASVKEVVLSGLTKTKRLFQTFNSKDNEKVIKVLERLNISDLIHKNIAELSGGQQQRVMIARALISEPAVLVLDEPTNGIDAKHVSEFYNTLDQLKQEGITIILVTHDIGVVADTATEVACLNKHLHFHGTTDEFKSLDEVEISKIYGHPVRFVDHQHNRECCN

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ANP_A_6(4ZIR)
ECFA2_THEMA
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_B_10(1G9X)
LIVG_METJA
[Raw transfer]




ADP_A_8(1G9X)
LIVG_METJA
[Raw transfer]




ADP_C_12(1G9X)
LIVG_METJA
[Raw transfer]




ADP_A_4(1G6H)
LIVG_METJA
[Raw transfer]




ADP_B_9(4HLU)
ECFA2_THEMA
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ADP_A_5(4HLU)
ECFA2_THEMA
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




43 PsiBlast_CBE 77.6138%-129 - C1 -3GFO - ECFA3_CLOP1 -
119 HHSearch 75.8435%-114 - C1 -3GFO - ECFA3_CLOP1 -
128 HHSearch 74.7933%-120 - C1 -2NQ2 - Y1470_HAEIN -
22 PsiBlast_CBE 74.3534%-122 - C1 -4U02 - ? -
66 PsiBlast_CBE 74.2632%-103 - C1 -4MKI 2.7 ECFA2_CALS4
23 PsiBlast_CBE 73.9034%-119 - C1 -4U02 - ? -
17 PsiBlast_PDB 73.7333%-124 - C1 -2NQ2 - Y1470_HAEIN -
36 PsiBlast_CBE 73.5834%-112 - C1 -4HLU 5.9 ECFA1_THEMA
1 PsiBlast_PDB 73.0734%-122 - C1 -4U00 6.2 ?
57 PsiBlast_CBE 72.8233%-114 - C1 -3PUV - MALK_ECOLI -
2 PsiBlast_PDB 72.3334%-116 - C1 -4U02 - ? -
67 PsiBlast_CBE 72.0032%-100 - C1 -4MKI 2.2 ECFA2_CALS4
47 PsiBlast_CBE 71.8633%-112 - C1 -3RLF - MALK_ECOLI -
53 PsiBlast_CBE 71.7833%-114 - C1 -3PUX - MALK_ECOLI -
21 PsiBlast_CBE 71.6734%-119 - C1 -4U02 - ? -
115 HHSearch 71.2132%-110 - C1 -3RLF - MALK_ECOLI -
14 PsiBlast_PDB 71.0029%-114 - C1 -2YYZ - ? -
54 PsiBlast_CBE 70.8133%-113 - C1 -3PUW - MALK_ECOLI -
45 PsiBlast_CBE 70.7833%-112 - C1 -4KI0 - ? -
64 PsiBlast_CBE 70.5433%-115 - C1 -1Q12 - MALK_ECOLI -
35 PsiBlast_CBE 67.0035%-109 - C1 -4YMU 4.5 ?
11 PsiBlast_PDB 66.8635%-112 - C1 -4YMU 4.9 ?
29 PsiBlast_CBE 65.4631%-119 - C1 -2OLK 5.2 ?
31 PsiBlast_CBE 65.1631%-118 - C1 -2OLK 6.4 ?
12 PsiBlast_PDB 63.7935%-108 - C1 -4YMV 4.2 ?
34 PsiBlast_CBE 63.6035%-106 - C1 -4YMV 3.8 ?
33 PsiBlast_CBE 60.0833%-117 - C1 -3C41 3.7 ?
8 PsiBlast_PDB 58.5333%-116 - C1 -3C41 4.6 ?
18 PsiBlast_PDB 54.8031%-111 - C1 -1G6H 4.5 LIVG_METJA
41 PsiBlast_CBE 53.6831%-114 - C1 -1G9X 6.4 LIVG_METJA
74 PsiBlast_CBE 52.2333%-106 - C1 -3TIF 7.4 Y796_METJA
42 PsiBlast_CBE 51.5731%-107 - C1 -1G9X 5.4 LIVG_METJA
75 PsiBlast_CBE 51.3833%-106 - C1 -3TIF 4.0 Y796_METJA
72 PsiBlast_CBE 50.7433%-107 - C1 -1L2T 6.6 Y796_METJA
40 PsiBlast_CBE 50.6931%-106 - C1 -1G9X 5.1 LIVG_METJA
73 PsiBlast_CBE 50.4033%-105 - C1 -1L2T 6.7 Y796_METJA
96 PsiBlast_CBE 48.5031% -99 - C1 -4HLU 4.7 ECFA2_THEMA
95 PsiBlast_CBE 47.7131% -98 - C1 -4HLU 5.1 ECFA2_THEMA
94 PsiBlast_CBE 46.1031%-105 - C1 -4ZIR 5.2 ECFA2_THEMA