@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1494: (2016-03-26 )
MRKLVVGSRRSKLALTQSQQFINKLKAVEPNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGTDPVELGKTVSNKLKEQGAYEIIKRLNEQH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DPM_A_2(4MLQ)
?
[Raw transfer]



DPM_A_2(4MLV)
?
[Raw transfer]



DPM_A_2(1GTK)
HEM3_ECOLI
[Raw transfer]



DPM_B_2(1YPN)
HEM3_ECOLI
[Raw transfer]



DPM_A_2(1GTK)
HEM3_ECOLI
[Raw transfer]



DPM_A_2(2YPN)
HEM3_ECOLI
[Raw transfer]



18W_A_2(4HTG)
HEM3_ARATH
[Raw transfer]



DPM_A_2(1AH5)
HEM3_ECOLI
[Raw transfer]



DPM_B_4(3ECR)
HEM3_HUMAN
[Raw transfer]



DPM_A_3(3ECR)
HEM3_HUMAN
[Raw transfer]



DPM_A_3(3ECR)
HEM3_HUMAN
[Raw transfer]



DPM_B_2(1PDA)
HEM3_ECOLI
[Raw transfer]



DPM_A_3(3EQ1)
HEM3_HUMAN
[Raw transfer]



DPM_B_4(3EQ1)
HEM3_HUMAN
[Raw transfer]



ACY_C_3(1PDA)
?
[Raw transfer]



DPM_B_2(1PDA)
?
[Raw transfer]



ACY_C_3(1PDA)
HEM3_ECOLI
[Raw transfer]
1 PsiBlast_PDB 99.8759% -90 - C4 -4MLQ 8.8 ?
2 PsiBlast_PDB 99.8659% -90 - C4 -4MLV 9.0 ?
21 HHSearch 92.6542% -88 - C4 -3ECR 7.8 HEM3_HUMAN
3 PsiBlast_PDB 89.6646% -75 - C4 -1PDA 9.5 HEM3_ECOLI
20 HHSearch 89.0045% -79 - C4 -1GTK 8.7 HEM3_ECOLI
7 PsiBlast_PDB 88.7246% -77 - C4 -1AH5 8.1 HEM3_ECOLI
6 PsiBlast_PDB 88.4745% -76 - C4 -1YPN 7.9 HEM3_ECOLI
4 PsiBlast_PDB 87.5746% -80 - C4 -2YPN 8.7 HEM3_ECOLI
5 PsiBlast_PDB 87.5646% -80 - C4 -1GTK 8.7 HEM3_ECOLI
8 PsiBlast_PDB 86.7243% -71 - C4 -4HTG 9.9 HEM3_ARATH
10 PsiBlast_PDB 83.9243% -88 - C4 -3EQ1 8.5 HEM3_HUMAN
15 PsiBlast_CBE 83.6443% -88 - C4 -3EQ1 8.7 HEM3_HUMAN
9 PsiBlast_PDB 82.4143% -87 - C4 -3ECR 7.8 HEM3_HUMAN
14 PsiBlast_CBE 81.6043% -80 - C4 -3ECR 8.4 HEM3_HUMAN
40 Fugue 74.7048% -73 - C4 -1PDA Error ?
47 Fugue 43.7217% -22 - C2 -1ZEL - ? -
44 Fugue 41.7919% -40 * C5 *4XD1 - ? -
31 HHSearch 37.0312% -43 - C4 -3UIF - ? -
26 HHSearch 36.6112% -33 * C4 *2X26 - SSUA_ECOLI -
22 HHSearch 36.319% -43 - C4 -2VD3 - HIS1_METTH -