@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0132: (2016-03-12 )
MAFYFEEPSRTFSEFLLVPGYSSAECVPTNVSLKTPIVKFKKGEESAITMNIPLVSAIMQAVSDDNMGIALATEGGVSFIFGSQSIESEAAMVSRVKNHKAGFVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYRVTRMSPDEKVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKDYDSNKENKLELLDSSKRYVVGAGINTRDYEERVPALVEAGADILCIDSSEGYSEWQKRTLDYVRGKYGDTVKVGAGNVVDRDGFRYLAEAGADFVKVGVGGGSICITREQKGIGRGQATALIDVAKARDEYFEETGVYIPICSDGGIVYDYHMTLALAMGADFIMLGRYFSRFDESPTNKVNLNGTYMKEYWGEGANRARNWQRYDLGGDKKLSFEEGVDSYVPYAGSLKDNVAISLSKVRSTMCNCGALNIPELQQKAKITLVSSTSIVEGGAHDVVVKDASNNLIK

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IMP_I_9(1MEH)
IMDH_TRIFO
[Raw transfer]




RVP_A_4(1ME8)
IMDH_TRIFO
[Raw transfer]




IMP_A_2(1ZFJ)
IMDH_STRPY
[Raw transfer]




RVP_A_4(1ME8)
IMDH_TRIFO
[Raw transfer]




XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]




IMP_A_2(1ZFJ)
IMDH_STRPY
[Raw transfer]




XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]




IMP_B_6(4FO4)
?
[Raw transfer]




IMP_I_9(1ME9)
IMDH_TRIFO
[Raw transfer]




IMP_A_3(4FO4)
?
[Raw transfer]




IMP_B_12(4MY8)
?
[Raw transfer]




IMP_U_21(1JR1)
IMDH2_CRIGR
[Raw transfer]




IMP_A_5(4QM1)
?
[Raw transfer]




RVP_A_4(1ME7)
IMDH_TRIFO
[Raw transfer]




IMP_A_5(4IX2)
?
[Raw transfer]




IMP_A_5(4MY8)
?
[Raw transfer]




IMP_B_7(4QM1)
?
[Raw transfer]




IMP_B_6(4IX2)
?
[Raw transfer]




IMP_A_2(4R7J)
?
[Raw transfer]




IMP_A_17(1JR1)
IMDH2_CRIGR
[Raw transfer]




NAD_Q_17(1NFB)
IMDH2_HUMAN
[Raw transfer]




NAD_U_21(1NFB)
IMDH2_HUMAN
[Raw transfer]




NAJ_B_7(4QNE)
?
[Raw transfer]




NAJ_A_4(4QNE)
?
[Raw transfer]




XMP_A_2(4QQ3)
?
[Raw transfer]




IMP_A_4(4AF0)
?
[Raw transfer]




IMP_B_6(4AF0)
?
[Raw transfer]




IMP_A_2(4FXS)
?
[Raw transfer]




IMP_D_11(4IX2)
?
[Raw transfer]




CPR_B_13(1NFB)
IMDH2_HUMAN
[Raw transfer]




IMP_C_8(4IX2)
?
[Raw transfer]




XMP_A_3(3TSD)
?
[Raw transfer]




CPR_A_9(1NFB)
IMDH2_HUMAN
[Raw transfer]




IMP_A_3(3USB)
?
[Raw transfer]




IMP_A_3(3USB)
?
[Raw transfer]




RVP_Y_25(1NF7)
IMDH2_HUMAN
[Raw transfer]




IMP_A_2(5AHN)
?
[Raw transfer]




NAD_A_4(4X3Z)
?
[Raw transfer]




NAD_B_8(4X3Z)
?
[Raw transfer]




MYD_U_21(1NF7)
IMDH2_HUMAN
[Raw transfer]




MOA_A_5(1ME7)
IMDH_TRIFO
[Raw transfer]




2EY_A_4(4MYA)
?
[Raw transfer]




2EY_B_8(4MYA)
?
[Raw transfer]




Q21_B_18(4MY8)
?
[Raw transfer]




2F1_C_20(4MZ1)
?
[Raw transfer]




2 PsiBlast_PDB 92.5871% -92 - C3 -1ME9 7.2 IMDH_TRIFO
3 PsiBlast_PDB 92.0271% -91 - C3 -1MEH 7.1 IMDH_TRIFO
1 PsiBlast_PDB 91.8671% -93 - C3 -1ME8 6.4 IMDH_TRIFO
4 PsiBlast_PDB 91.7271% -91 - C3 -1ME7 6.3 IMDH_TRIFO
116 HHSearch 90.9569% -93 - C3 -1ME8 6.4 IMDH_TRIFO
5 PsiBlast_PDB 88.6671% -99 - C3 -1AK5 - IMDH_TRIFO -
7 PsiBlast_PDB 84.7535% -70 - C3 -3TSB - ? -
118 HHSearch 84.3434% -67 - C3 -1ZFJ 6.2 IMDH_STRPY
18 PsiBlast_PDB 83.6035% -97 - C3 -4DQW - ? -
20 PsiBlast_PDB 83.4132% -66 - C3 -1ZFJ 6.2 IMDH_STRPY
117 HHSearch 83.0236% -81 - C3 -3USB 4.7 ?
10 PsiBlast_PDB 82.5734% -87 - C3 -4FXS 6.7 ?
8 PsiBlast_PDB 82.4635% -79 - C3 -3TSD 6.0 ?
15 PsiBlast_PDB 82.0434% -80 - C3 -3USB 4.7 ?
26 PsiBlast_CBE 81.0635% -98 - C3 -4DQW - ? -
106 Fugue 80.9132% -67 - C3 -1ZFJ - IMDH_STRPY -
22 PsiBlast_CBE 79.7232% -82 - C3 -1NF7 4.9 IMDH2_HUMAN
12 PsiBlast_PDB 79.3132% -82 - C3 -1NF7 3.6 IMDH2_HUMAN
14 PsiBlast_PDB 78.2532% -73 - C3 -1JR1 6.1 IMDH2_CRIGR
25 PsiBlast_CBE 77.1733% -91 - C3 -4AF0 6.8 ?
21 PsiBlast_CBE 76.7532% -90 - C3 -1NFB 4.8 IMDH2_HUMAN
9 PsiBlast_PDB 76.3233% -91 - C3 -4AF0 6.7 ?
13 PsiBlast_PDB 75.1432% -89 - C3 -1NFB 4.9 IMDH2_HUMAN
24 PsiBlast_CBE 72.7632% -86 - C3 -1JR1 6.3 IMDH2_CRIGR
19 PsiBlast_PDB 72.1435% -97 - C3 -5AHN 4.7 ?
121 HHSearch 70.7531% -76 - C3 -2CU0 6.7 IMDH_PYRHO
27 PsiBlast_CBE 70.4431% -68 - C3 -2CU0 6.7 IMDH_PYRHO
57 PsiBlast_CBE 62.8136% -69 - C3 -4MY8 6.3 ?
56 PsiBlast_CBE 62.3636% -70 - C3 -4MY8 6.3 ?
44 PsiBlast_CBE 61.9136% -64 - C3 -4MYA 4.2 ?
55 PsiBlast_CBE 61.7936% -70 - C3 -4MY8 4.2 ?
34 PsiBlast_CBE 60.8336% -66 - C3 -4QM1 6.3 ?
77 PsiBlast_CBE 60.8034% -56 - C3 -4R7J 6.5 ?
45 PsiBlast_CBE 60.6236% -62 - C3 -4MYA 4.0 ?
78 PsiBlast_CBE 60.3834% -58 - C3 -4MZ1 3.8 ?
35 PsiBlast_CBE 58.5836% -63 - C3 -4QM1 5.8 ?
69 PsiBlast_CBE 55.7937% -52 - C3 -4QNE 5.2 ?
66 PsiBlast_CBE 55.6937% -50 - C3 -4X3Z 4.3 ?
76 PsiBlast_CBE 55.4737% -52 - C3 -4FO4 6.0 ?
67 PsiBlast_CBE 55.3837% -48 - C3 -4X3Z 4.2 ?
70 PsiBlast_CBE 55.0737% -53 - C3 -4QNE 4.6 ?
75 PsiBlast_CBE 55.0237% -48 - C3 -4FO4 6.3 ?
74 PsiBlast_CBE 54.6637% -56 - C3 -4IX2 5.2 ?
73 PsiBlast_CBE 54.6237% -56 - C3 -4IX2 4.4 ?
71 PsiBlast_CBE 54.2437% -58 - C3 -4IX2 5.6 ?
72 PsiBlast_CBE 53.4237% -57 - C3 -4IX2 5.6 ?
68 PsiBlast_CBE 52.4237% -69 - C3 -4QQ3 7.1 ?