@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0886: (2016-03-19 )
MVTGWHRPTWIEIDRAAIRENIKNEQNKLPESVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCVAILDEALALREAGFQDDFILVLGATRKEDANLAAKNHISLTVFREDWLENLTLEATLRIHLKVDSGMGRLGIRTTEEARRIEATSTNDHQLQLEGIYTHFATADQLETSYFEQQLAKFQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPALALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGFHVLVGGELAPIIGRVCMDQTIIKLPREFQTGSKVTIIGKDHGNTITADDAAQYLDTINYEVTCLLNERIPRKYIH

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BME_A_5(3OO2)
ALR1_STAAC
[Raw transfer]



IN5_B_4(1BD0)
ALR_GEOSE
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



DCS_C_6(3E6E)
?
[Raw transfer]



DCS_A_4(3E6E)
?
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



DCS_B_5(3E6E)
?
[Raw transfer]



PLP_A_5(1SFT)
ALR_GEOSE
[Raw transfer]



PLP_B_7(3E5P)
?
[Raw transfer]



PLP_C_10(3E5P)
?
[Raw transfer]



PLP_B_6(1SFT)
ALR_GEOSE
[Raw transfer]



DCS_A_3(4LUT)
?
[Raw transfer]



PLP_A_4(3E5P)
?
[Raw transfer]



PLP_A_3(4A3Q)
ALR1_STAAM
[Raw transfer]



PLP_A_4(3E5P)
?
[Raw transfer]



PLP_A_3(1XFC)
ALR_MYCTU
[Raw transfer]



PLP_B_11(4A3Q)
ALR1_STAAM
[Raw transfer]



PLP_A_3(1XFC)
ALR_MYCTU
[Raw transfer]



PLP_B_4(1XFC)
ALR_MYCTU
[Raw transfer]



PLP_A_3(3CO8)
LYSR_OENOB
[Raw transfer]



PLP_A_3(3CO8)
LYSR_OENOB
[Raw transfer]



GOL_B_18(4DYJ)
ALR_PSEPU
[Raw transfer]
21 PsiBlast_CBE 96.1253%-102 - C2 -1SFT 5.7 ALR_GEOSE
22 PsiBlast_CBE 95.6753%-100 - C2 -1BD0 7.9 ALR_GEOSE
35 HHSearch 95.5554%-105 - C2 -1BD0 7.5 ALR_GEOSE
1 PsiBlast_PDB 95.5553%-105 - C2 -1SFT 4.3 ALR_GEOSE
2 PsiBlast_PDB 94.9853%-102 - C2 -1BD0 - ALR_GEOSE -
7 PsiBlast_PDB 93.2547%-106 - C2 -3HA1 - ? -
23 PsiBlast_CBE 91.3548%-100 - C2 -3E6E 5.6 ?
25 PsiBlast_CBE 91.1248% -97 - C2 -3E5P 3.1 ?
26 PsiBlast_CBE 90.8248% -96 - C2 -3E5P 3.5 ?
5 PsiBlast_PDB 90.7349%-118 - C2 -4ILS - ALR_GEOSE -
3 PsiBlast_PDB 90.4948% -97 - C2 -3E5P 4.2 ?
34 HHSearch 90.3248% -98 - C2 -3E5P 4.2 ?
4 PsiBlast_PDB 90.1448% -92 - C2 -3E6E 5.9 ?
24 PsiBlast_CBE 89.9348% -94 - C2 -3E6E 5.4 ?
8 PsiBlast_PDB 87.2240%-106 - C2 -3OO2 - ALR1_STAAC -
27 PsiBlast_CBE 84.7840%-103 - C2 -3OO2 Error ALR1_STAAC
9 PsiBlast_PDB 84.6340%-109 - C2 -4A3Q 3.8 ALR1_STAAM
28 PsiBlast_CBE 84.0240%-105 - C2 -4A3Q 3.7 ALR1_STAAM
11 PsiBlast_PDB 81.4634%-108 - C2 -4LUS - ? -
13 PsiBlast_PDB 81.4537% -94 - C2 -3HUR - ? -
10 PsiBlast_PDB 80.5935%-106 - C2 -4LUT 5.0 ?
37 HHSearch 80.3033% -97 - C2 -3CO8 4.3 LYSR_OENOB
12 PsiBlast_PDB 79.6532% -97 - C2 -3CO8 4.2 LYSR_OENOB
40 HHSearch 78.1632%-100 - C2 -1XFC 3.7 ALR_MYCTU
15 PsiBlast_PDB 75.5732% -98 - C2 -1XFC 3.7 ALR_MYCTU
30 PsiBlast_CBE 74.9332% -95 - C2 -1XFC 3.3 ALR_MYCTU
58 Fugue 70.9555% -88 - C2 -1BD0 7.0 ALR_GEOSE
57 Fugue 69.7554% -81 * C2 *1BD0 7.0 ALR_GEOSE